ID: uc011als.1_intron_23_0_chr22_32233142_f.5p
GENE: (24)
chr22:32233092-32233341+


(1)
AGO1.ip 		(1)
B-CELL 		(1)
BRAIN 		(1)
BREAST 		(12)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(3)
HEART 		(1)
HELA 		(5)
LIVER 		(1)
OTHER 		(22)
SKIN 		(3)
UTERUS

Sense strand
GACTACACAGAGGGCTGTTATGATCTCCTTCCAGAAGCAGACATCGACAGGTCAGTGTCAGAGAAAAAGGCACTTGGCTTGGTTGGTGAGGGTTTCGGATATATCCCACACATGCATCAGAACACTGGATTTGTGCTGGCTTCAGCAACACATATATTAAAATTGGAACGATATAGAGGAGATTAGCATGGCCGTTAAATAAAAAATTTTAAAAAAACATTGAATTGTATTTTATCTTTTTTTTTCCTTT
.....................................................................................................................(((....)))....(((((((....))))).))..((((((...........))))))...........................................................................
.....................................................................................................................118...........................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)
..............................................................................................................................................................AAAATTGGAACGATAGAG..........................................................................1837.000.0036.00--1.00---------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATACATC.........................................................................1919.000.0016.002.00-1.00---------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATAGAGA.........................................................................1912.000.0011.00------------------1.00-----------------------------------
.............................................................................................................................................................TAAAATTGGAACGATATC...........................................................................1811.000.0010.001.00-----------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATATA...........................................................................18710.5710.5710.000.14-0.290.14--------------------------------------------------
................................................................................................................................................................AATTGGAACGATATACTAA.......................................................................195.000.00-----3.00---2.00---------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATAAAA..........................................................................183.000.003.00------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAG..........................................................................1872.432.432.29--------------0.14---------------------------------------
......................ATCTCCTTCCAGAAGCAGACATCG............................................................................................................................................................................................................2412.002.00-------2.00-----------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATACAGT.........................................................................192.000.002.00------------------------------------------------------
.........................................................................................................................................................................................................................................ATCTTTTTTTTTCCTTTGGAG212.000.00--2.00----------------------------------------------------
............................................................................................................................................................TTAAAATTGGAACGATATA...........................................................................1912.002.001.001.00-----------------------------------------------------
..........................................................................................................................................................TATTAAAATTGGAACGATATAGAGAA......................................................................262.000.00-2.00-----------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATACA...........................................................................172.000.00----------2.00--------------------------------------------
..........................................................................................................................................................TATTAAAATTGGAACGATATA...........................................................................2112.002.00---1.001.00--------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAC..........................................................................182.000.002.00------------------------------------------------------
......ACAGAGGGCTGTTATGATCTCC..............................................................................................................................................................................................................................2211.001.00--------------------1.00----------------------------------
................................................................................................................................................................AATTGGAACGATATAGAGGA......................................................................2011.001.00----1.00--------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATACAC..........................................................................181.000.001.00------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATA.............................................................................1601.001.00---------------------------1.00---------------------------
.............................................................................................................................................................TAAAATTGGAACGATAGA...........................................................................1801.001.00----------------1.00--------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATAGAGA.........................................................................2001.001.001.00------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATAAGA..........................................................................181.000.001.00------------------------------------------------------
.........................................................................................................................................................................................................................................ATCTTTTTTTTTCCTTTGGGG211.000.00--1.00----------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATACTAA.........................................................................2001.001.001.00------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATACAC..........................................................................1901.001.00--------------------------------1.00----------------------
...................................................................................................................................................................................................................................TATTTTATCTTTTTTTTTAATG.221.000.00-----------1.00-------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATGG............................................................................171.000.00------1.00------------------------------------------------
....................................................................................................................................................................................................................................ATTTTATCTTTTTTTTTCCG..201.000.00---------------------1.00---------------------------------
.............................................................................................................................................................TAAAATTGGAACGATACATC.........................................................................2001.001.001.00------------------------------------------------------
....................................................................................................................................................................................................................................ATTTTATCTTTTTTTTTATG..201.000.00-------------1.00-----------------------------------------
........................................................................................................................................................................................................................................TATCTTTTTTTTTCCTTTCG201.000.00--------------1.00----------------------------------------
..............................................................................................................................................................AAAATTGGAACGATACATT.........................................................................191.000.001.00------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATGCG...........................................................................181.000.00--------1.00----------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATCC............................................................................171.000.00------------------------------1.00------------------------
........................................................................................................................................................TATATTAAAATTGGAACTATA.............................................................................211.000.001.00------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATAACAG.........................................................................191.000.00-----------------1.00-------------------------------------
......................................................................................................................................................................................................................................TTTATCTTTTTTTTTCCAGCT211.000.00-------------1.00-----------------------------------------
.........................................................................................................................................................................................................................CATTGAATTGTATTTTTG...............181.000.00----------------------------1.00--------------------------
..............................................................................................................................................................AAAATTGGAACGATAGA...........................................................................171.000.00------------------------------------1.00------------------
................................................................................................................................................................AATTGGAACGATATAGAGGG......................................................................201.000.00---------------1.00---------------------------------------
..........................................................................................................................CACTGGATTTGTGCTGGCTTC...........................................................................................................2111.001.00------------------------1.00------------------------------
.............................................................................................................................................................TAAAATTGGAACGATATGACA........................................................................211.000.00------1.00------------------------------------------------
....ACACAGAGGGCTGTTATGATA.................................................................................................................................................................................................................................211.000.00-----------------------1.00-------------------------------
.......CAGAGGGCTGTTATGATCTCC..............................................................................................................................................................................................................................2111.001.00---------------------------------1.00---------------------
..............................................................................................................................................................AAAATTGGAACGATACACT.........................................................................191.000.001.00------------------------------------------------------
..CTACACAGAGGGCTGTTATGATCTCTG.............................................................................................................................................................................................................................271.000.00--------------------------1.00----------------------------
...................................................................................................................................................................................................................................TATTTTATCTTTTTTTTTCTG..211.000.00------------1.00------------------------------------------
...................................................................................................................................................................................................................................TATTTTATCTTTTTTTTTCAG..211.000.00------------1.00------------------------------------------
....................................................................................................................................................................................................................................ATTTTATCTTTTTTTTTCTTTG221.000.00-----------1.00-------------------------------------------
....................................................................................................ATATCCCACACATGCATCAGAACACTGGAC........................................................................................................................301.000.00-----------------------------1.00-------------------------
..........................................................................................................................................................TATTAAAATTGGAACGATATC...........................................................................211.000.00----1.00--------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATACAGT.........................................................................2001.001.001.00------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATTCA...........................................................................181.000.001.00------------------------------------------------------
............................................................................................................................................................TTAAAATTGGAACGATATAG..........................................................................2011.001.001.00------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATTCAG..........................................................................191.000.00--------1.00----------------------------------------------
......................................................................................................................................................................................................................................TTTATCTTTTTTTTTCCTTTTGAG241.000.00--1.00----------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATACCGA.........................................................................2001.001.00----------------------1.00--------------------------------
........................................................................................................................................................................................................................................TATCTTTTTTTTTCCTTGTC201.000.00--1.00----------------------------------------------------
...................................................................................................................................................................TGGAACGATATAGAGGAGATTAGCATGGC..........................................................2911.001.00------------------1.00------------------------------------
...........................................................................................................................................................ATTAAAATTGGAACGATATC...........................................................................201.000.001.00------------------------------------------------------
...................................................................................................................................................................TGGAACGATATAGAG........................................................................1590.780.78--------------------------------------0.110.56-0.11-------------
..................................................................................................................................................................TTGGAACGATATAGA.........................................................................1580.620.62------------------0.12------------------0.12---------0.12--0.12--0.12-
............................................................................................................................................................TTAAAATTGGAACGATA.............................................................................1740.500.50----------------------------------------0.25-0.25------------
.........................................................................................................................................................ATATTAAAATTGGAACGATA.............................................................................2020.500.500.50------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAGA.........................................................................1970.430.430.29------------------------------------------0.14-----------
...............................................................................................................................................................AAATTGGAACGATATAGA.........................................................................1880.380.38-------------------------------------0.12---0.12----0.12--------
.................................................................................................................................................................ATTGGAACGATATAGA.........................................................................1680.380.38------0.12----------------------------------0.12---0.12---------
...............................................................................................................................................................AAATTGGAACGATATAGAG........................................................................1980.380.380.25-------------------------------------0.12----------------
................................................................................................................................................................AATTGGAACGATATAGAG........................................................................1880.380.380.25---------------------------------------------------0.12--
...........................................................................................................................................................ATTAAAATTGGAACGATAGAG..........................................................................2130.330.330.33------------------------------------------------------
...........................................................................................................................................................ATTAAAATTGGAACGATA.............................................................................1830.330.33--------------------------------------0.33----------------
........................................................................................................................................................TATATTAAAATTGGAACGA...............................................................................1930.330.33------0.33------------------------------------------------
..........................................................................................................................................................TATTAAAATTGGAACGATA.............................................................................1930.330.33-------------------------------------0.33-----------------
.............................................................................................................................................................TAAAATTGGAACGATATAC..........................................................................1970.2910.57-----------------0.14--------------------------0.14----------
.................................................................................................................................................................ATTGGAACGATATAGAG........................................................................1780.250.25-------------------------------------0.12-----------0.12-----
..........................................................................................................................................................TATTAAAATTGGAACGA...............................................................................1740.250.25----------------0.25--------------------------------------
...................................................................................................................................................................................AGATTAGCATGGCCG........................................................1540.250.25----------------------------------------0.25--------------
..............................................................................................................................................................AAAATTGGAACGATATAGAGAGG.....................................................................2370.140.140.14------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAGATAAG.....................................................................2370.140.430.14------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAGAG........................................................................2070.140.140.14------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATATAG..........................................................................1970.140.140.14------------------------------------------------------
..............................................................................................................................................................AAAATTGGAACGATATAGAGTA......................................................................2270.140.140.14------------------------------------------------------
.............................................................................................................................................................TAAAATTGGAACGATATAGA.........................................................................2070.140.140.14------------------------------------------------------
................................................................................................................................................................AATTGGAACGATATAGAGTGGC....................................................................2280.120.38---------------------------------------------------0.12---
................................................................................................................................................................AATTGGAACGATATAGAGAAGG....................................................................2280.120.38----0.12--------------------------------------------------
................................................................................................................................................................AATTGGAACGATATAGAGCAG.....................................................................2180.120.38---------------0.12---------------------------------------
................................................................................................................................................................AATTGGAACGATATAG..........................................................................1680.120.12------------------------------------------------0.12------
..................................................................................................................................................................TTGGAACGATATAGAG........................................................................1680.120.12--------------------------------------0.12----------------
...................................................................................................................................................................TGGAACGATATAGAGAAA.....................................................................1890.110.78------------------------------------------------------0.11

Antisense strand
GACTACACAGAGGGCTGTTATGATCTCCTTCCAGAAGCAGACATCGACAGGTCAGTGTCAGAGAAAAAGGCACTTGGCTTGGTTGGTGAGGGTTTCGGATATATCCCACACATGCATCAGAACACTGGATTTGTGCTGGCTTCAGCAACACATATATTAAAATTGGAACGATATAGAGGAGATTAGCATGGCCGTTAAATAAAAAATTTTAAAAAAACATTGAATTGTATTTTATCTTTTTTTTTCCTTT
.....................................................................................................................(((....)))....(((((((....))))).))..((((((...........))))))...........................................................................
.....................................................................................................................118...........................................................180....................................................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR189784SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532883(GSM532883)
G871N. (cervix)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040008(GSM532893)
G727N. (cervix)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577740(Rovira)
total RNA. (breast)
..........................................................................................................................................................................ATATAGAGGAGATTAGGTGC............................................................ 201.000.00----------------------------------1.00--------------------
.............................................................................................................................TGGATTTGTGCTGGCTAA........................................................................................................... 181.000.00-------------------------------1.00-----------------------
....................................................................................................................................................................................................AAATAAAAAATTTTAAAAAAACTAG............................. 251.000.00--------------1.00----------------------------------------
...................................................................................................TATATCCCACACATGAGC..................................................................................................................................... 181.000.00-----------------------------------1.00-------------------
......................................................CTTTTTCTCTGACAC..................................................................................................................................................................................... 1501.001.00-------------------------1.00-----------------------------