ID: uc011ala.1_intron_4_0_chr22_31283606_f.3p
GENE: OSBP2(5)
chr22:31284010-31284259+


(1)
AGO1.ip 		(1)
AGO2.ip 		(1)
B-CELL 		(10)
BRAIN 		(4)
BREAST 		(11)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(6)
HELA 		(2)
OTHER 		(1)
RRP40.ip 		(16)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
GGTGAATGCGTTGAAAGCACATGATTCTAGCAGAGGGAGCAAGGGTGGCCGCAGCCCAGGGAATCAGGGCTGCCCAGGTGACTGAAGCAGGAGGGGAGTGAGGCCAGATGGGGGTTGGGGGAGCCCTTGGCTCTGGACTTAGGGAGGCGAGATTGAGCCTTTTGTGAGGTTACAAATTAAAGCTCTGTCTGTGTCTCTAGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGAGGAAGATGAAGATACC
...........................................................................................................................................((((((.((.((((.((((..((((((....)))))).....)))).)))))).))))))...................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040023(GSM532908)
G575T. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTAGT.................................................22117.0014.00-2.002.001.00--2.00-1.00-1.00-2.00---1.001.00--1.001.00--1.00-------------------1.00--------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTAG..................................................21114.0014.00-2.003.00-------1.00--1.00--1.00--------1.00--1.001.00---1.00-------------1.00------1.00----
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTAGA.................................................22111.0014.00----4.00---1.003.00-------------1.00--------1.00----------1.00---------------
....................................................................................................................................................................................AGCTCTGTCTGTGTCTCTAGT.................................................2116.003.00---1.00--1.001.00-----------2.00----------------------------1.00----------
....................................................................................................................................CTGGACTTAGGGAGGCGAGATTGAGCCTTTTGTGAGGTTACAAATTAAAGCTCTGTCTGTGTCTCTAGAA................................................706.000.006.00----------------------------------------------------------
........................................................................................................................................ACTTAGGGAGGCGAGATTGAGCCTTTTGTGAGGTTACAAATTAAAGCTCTGTCTGTGTCTCTAGT.................................................655.000.005.00----------------------------------------------------------
..........................................................................................................................................TTAGGGAGGCGAGATTGAG.............................................................................................1914.004.00-------------------------------1.00-------1.00--1.00---1.00------------
....................................................................................................................................................................................AGCTCTGTCTGTGTCTCTAGTT................................................2213.003.00------1.00----1.00-1.00---------------------------------------------
....................................................................................................................................................................................AGCTCTGTCTGTGTCTCTAG..................................................2013.003.00-1.00--------------------1.00------------------1.00-----------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCT....................................................1912.002.00--------------1.00----------------------------------1.00---------
....................................................................................................................................................................................AGCTCTGTCTGTGTCTCTAGA.................................................2112.003.00--------1.00--------------------------1.00-----------------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTA...................................................2012.002.00-----------1.00------------------1.00----------------------------
....................................................................................................................................................................................AGCTCTGTCTGTGTCTCTAGTAG...............................................2312.003.00-------2.00---------------------------------------------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTTGT.................................................2211.002.00-----------------1.00-----------------------------------------
........................................................................................................................................................................................................................CAAAGGAGAGGACAGTGAGGAAGA..........2411.001.00------------------1.00----------------------------------------
...........................................................................................................................................................................................................................AGGAGAGGACAGTGAGGAAGATGA.......2411.001.00-------------------------------------------------------1.00---
...............................................................................................................................................................................................................................GAGGACAGTGAGGAAGGC.........181.000.00---------------------------------------------------------1.00-
...............................................................................................................................................................................................................................GAGGACAGTGAGGAAGATGA.......2011.001.00-----1.00-----------------------------------------------------
..........................................................................................................................................................................................GTCTGTGTCTCTAGGGGAA.............................................191.000.00------------------------------------1.00----------------------
..................................................................................................................................................................................AAAGCTCTGTCTGTGTCTCTAG..................................................2211.001.00--------------------1.00--------------------------------------
...................................................................................................................................................CGAGATTGAGCCTTT........................................................................................1511.001.00----------------------------------1.00------------------------
........................................................................................................................................................................................................................CAAAGGAGAGGACAGTGAGGGA............2211.001.00--------------1.00--------------------------------------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTATT.................................................2211.002.00---1.00-------------------------------------------------------
..........................................................................................................................................................................................................................AAGGAGAGGACAGTGAGG..............1811.001.00----------1.00------------------------------------------------
...........................................................................................................................................TAGGGAGGCGAGATTGAGCCTT.........................................................................................2211.001.00-1.00---------------------------------------------------------
...................................................................................................................................................................................AAGCTCTGTCTGTGTCTCTAGTA................................................2311.0014.00-----------------------------------------------------1.00-----
....................................................................................................................................................................................................................................CAGTGAGGAAGATGAAGA....1811.001.00---------------1.00-------------------------------------------
...................................................................................................................TGGGGGAGCCCTTGGAGG.....................................................................................................................181.000.00---------------------------------------------------1.00-------
......................................GCAAGGGTGGCCGCACGG..................................................................................................................................................................................................181.000.00--------------------------------------1.00--------------------
...................................................................................................................................................................................................................................ACAGTGAGGAAGATGTAGG....191.000.00---------------------------1.00-------------------------------
..........................................................................................................................................TTAGGGAGGCGAGATTGAA.............................................................................................191.000.00---------------1.00-------------------------------------------
...................................................................................................................................................................................................................................ACAGTGAGGAAGATGAAGAT...2011.001.00------------------1.00----------------------------------------
........................................................................................................................................................................................................................CAAAGGAGAGGACAGTGAGG..............2011.001.00--------------------------1.00--------------------------------
.........................................................................................................................................CTTAGGGAGGCGAGATTGAGCCTTT........................................................................................2511.001.00-------------------------------------1.00---------------------
.........................................................................................................................................................................................................................AAAGGAGAGGACAGTGAGGAAGATGAAG.....2811.001.00---1.00-------------------------------------------------------
...........................................................................................................................................TAGGGAGGCGAGATTGAGC............................................................................................1911.001.00---------------------------------------------1.00-------------
................................................................................................................................................................................................................................AGGACAGTGAGGAAGATG........1840.250.25----------------------------------------------------------0.25

Antisense strand
GGTGAATGCGTTGAAAGCACATGATTCTAGCAGAGGGAGCAAGGGTGGCCGCAGCCCAGGGAATCAGGGCTGCCCAGGTGACTGAAGCAGGAGGGGAGTGAGGCCAGATGGGGGTTGGGGGAGCCCTTGGCTCTGGACTTAGGGAGGCGAGATTGAGCCTTTTGTGAGGTTACAAATTAAAGCTCTGTCTGTGTCTCTAGGAAGCCTCTTGACTCCCAAAGGAGAGGACAGTGAGGAAGATGAAGATACC
...........................................................................................................................................((((((.((.((((.((((..((((((....)))))).....)))).)))))).))))))...................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040023(GSM532908)
G575T. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577739(Rovira)
total RNA. (breast)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
.................................................................................................................................CTCAATCTCGCCTCCCTAAGTCCAGAGC............................................................................................. 2811.001.00-----1.00-----------------------------------------------------
................................GAGGGAGCAAGGGTGGCCGCAGCCCACGC............................................................................................................................................................................................. 291.000.00----------------------------------------1.00------------------
.........................................................................................................................................................................................................................................AGGAAGATGAAGATATTAG 191.000.00--------------------------------------------------------1.00--
.............CCCTCTGCTAGAATCATGTGCTTT..................................................................................................................................................................................................................... 2411.001.00--------------------------------------------------1.00--------
...................................................................................................................................................................................TAGAGACACAGACAGAGCTT................................................... 2011.001.00----------------------------------------------------1.00------
.................................................................................................................................TCAATCTCGCCTCCCTAAGTCCAGAGC.............................................................................................. 2711.001.00-----1.00-----------------------------------------------------
.......TCTGCTAGAATCATGTGCTTTCAACGC........................................................................................................................................................................................................................ 2711.001.00-----1.00-----------------------------------------------------