ID: uc011adk.1_intron_5_0_chr21_32508360_r.5p
GENE: TIAM1(20)
chr21:32513236-32513485-


(1)
B-CELL
(3)
BRAIN
(4)
BREAST
(8)
CELL-LINE
(2)
CERVIX
(1)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(3)
LIVER
(2)
OTHER
(15)
SKIN
(1)
TESTES

Sense strand
GGGCTGTGTTTGACCAGCTGATTGCTGAACAGACTGGTGAGAAAAAAGAGGTGAGGGTCCCCATCTTCTCAGGACATCTGTCAGGAAAGCCGAGTTTGAGTTTGCTTTTATTTATTTATTTATTTTTTAAAAAGGTGTTACTTGTAAGTAAAATAGTTAGGATGCTGTTGTTTTTCTTAGTGGAACATCTGTGCTTTATCCAAGGCTGCAATGTGAATTTTCTTCCTCAGCTGGACTATTTCTTCCTGTA
.......................................................................................................(((((((.((((((((((((........(((......)))))))))))).))).))))).)).....................................................................................
...................................................................................................100......................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
........................................................................................................CTTTTATTTATTTATTTATTTTTTAAAAAG....................................................................................................................30112.0012.001.005.004.00-2.00--------------------------------------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAAAAG.....................................................................................................................289.000.004.002.003.00----------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTTCAAG........................................................................................................................267.000.003.001.001.00-2.00--------------------------------------
..............................AGACTGGTGAGAAAAAAGAG........................................................................................................................................................................................................2015.005.00------5.00------------------------------------
......................TGCTGAACAGACTGGTGAGAAAAAAGAGGTTGC...................................................................................................................................................................................................335.000.00---5.00---------------------------------------
........................................................................................................CTTTTATTTATTTATTTATCTAG...........................................................................................................................234.000.004.00------------------------------------------
..............................................................................................................................................................AGGATGCTGTTGTTTTTCTTAGCGGA..................................................................263.000.00---------3.00---------------------------------
...............................................................................................................TTATTTATTTATTTTTTAAACTTG...................................................................................................................243.000.00-2.001.00----------------------------------------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAACG......................................................................................................................272.000.00--2.00----------------------------------------
......................TGCTGAACAGACTGGTGAGAAAAAAGAGG.......................................................................................................................................................................................................2912.002.00----------------1.00-------------------1.00------
..................TGATTGCTGAACAGACTGGT....................................................................................................................................................................................................................2012.002.00-----------2.00-------------------------------
...............................GACTGGTGAGAAAAAAGAGGTTG....................................................................................................................................................................................................232.000.00--------------2.00----------------------------
....................ATTGCTGAACAGACTGGTGA..................................................................................................................................................................................................................2012.002.00-------------2.00-----------------------------
.......................GCTGAACAGACTGGTGAGAAAAAAGAGGTTG....................................................................................................................................................................................................312.000.00---1.00---1.00-----------------------------------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAAACTTG...................................................................................................................302.000.00-1.001.00----------------------------------------
...............AGCTGATTGCTGAACAGACT.......................................................................................................................................................................................................................2011.001.00--------1.00----------------------------------
................GCTGATTGCTGAACAGACTGGTGAGA................................................................................................................................................................................................................2611.001.00--------1.00----------------------------------
....................................................................................................................................................TAAAATAGTTAGGATGTTGG..................................................................................201.000.00---1.00---------------------------------------
...............................................................................GTCAGGAAAGCCGAGAGA.........................................................................................................................................................181.000.00---------------------------------1.00---------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAAAAAG....................................................................................................................2911.001.00-1.00-----------------------------------------
.....................TTGCTGAACAGACTGGTGAGA................................................................................................................................................................................................................2111.001.00----------1.00--------------------------------
............................ACAGACTGGTGAGAAAAAAGAG........................................................................................................................................................................................................2211.001.00------------------1.00------------------------
........................................................................................................CTTTTATTTATTTATTTATTTTTTATTG......................................................................................................................281.000.00--1.00----------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTTCGT.........................................................................................................................251.000.00-----1.00-------------------------------------
........TTTGACCAGCTGATTTGG................................................................................................................................................................................................................................181.000.00----------------------1.00--------------------
................GCTGATTGCTGAACAGACTG......................................................................................................................................................................................................................2011.001.00----------------------------------1.00--------
.........................................................................................................................................................................................................................TTTTCTTCCTCAGCTGCTG..............191.000.00---------------------1.00---------------------
...............AGCTGATTGCTGAACA...........................................................................................................................................................................................................................1611.001.00--------------------1.00----------------------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAAATG.....................................................................................................................281.000.001.00------------------------------------------
....................................................................................................TTTGCTTTTATTTATTTATTTATTTTTTAAAAAG....................................................................................................................3411.001.00-1.00-----------------------------------------
.......................GCTGAACAGACTGGTGAGG................................................................................................................................................................................................................191.000.00--------------------------------1.00----------
...............AGCTGATTGCTGAACAGACTGGTGA..................................................................................................................................................................................................................2511.001.00--------1.00----------------------------------
.......................................................................................................GCTTTTATTTATTTATTTATTTTCTTG........................................................................................................................271.000.00-----1.00-------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTTCTAG........................................................................................................................261.000.00--1.00----------------------------------------
......................TGCTGAACAGACTGGTGAGATA..............................................................................................................................................................................................................221.000.00------------1.00------------------------------
........................................................................................................CTTTTATTTATTTATTTATCG.............................................................................................................................211.000.00----1.00--------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTTCATG........................................................................................................................261.000.00----1.00--------------------------------------
...................GATTGCTGAACAGACTGGTG...................................................................................................................................................................................................................2011.001.00----------1.00--------------------------------
...............................................................................GTCAGGAAAGCCGAGTGGC........................................................................................................................................................191.000.00-------------------------------1.00-----------
.................CTGATTGCTGAACAGACTGG.....................................................................................................................................................................................................................2011.001.00-----------------------------------1.00-------
......................TGCTGAACAGACTGGTGAGAAAAAAGAG........................................................................................................................................................................................................2811.001.00---------------------------1.00---------------
......................TGCTGAACAGACTGGTG...................................................................................................................................................................................................................1711.001.00-----------------1.00-------------------------
.........................TGAACAGACTGGTGAGAAAAAAGAGGTT.....................................................................................................................................................................................................281.000.00-----------------------------1.00-------------
.....................TTGCTGAACAGACTGGTGAG.................................................................................................................................................................................................................2011.001.00-------1.00-----------------------------------
.....................TTGCTGAACAGACTGGTGAGAA...............................................................................................................................................................................................................2211.001.00------------------------------1.00------------
.....................................................................................................TTGCTTTTATTTATTTATTTATTTTAC..........................................................................................................................271.000.00-----1.00-------------------------------------
..................TGATTGCTGAACAGACTGGTGAGAAAAAAGAGG.......................................................................................................................................................................................................3311.001.00--------------------------------------1.00----
.......................GCTGAACAGACTGGTGAGAAAAAAGAGGTT.....................................................................................................................................................................................................301.000.00-------1.00-----------------------------------
.....................TTGCTGAACAGACTGGTGAGAAAAAAGAGGTT.....................................................................................................................................................................................................321.000.00---1.00---------------------------------------
......................TGCTGAACAGACTGGTGTTGT...............................................................................................................................................................................................................2111.001.00-----------------------1.00-------------------
......................TGCTGAACAGACTGGTGAGAAA..............................................................................................................................................................................................................2211.001.00------------1.00------------------------------
.............................CAGACTGGTGAGAAAAAAGAGGTTGC...................................................................................................................................................................................................261.000.00----------------------------1.00--------------
....................................................................................................TTTGCTTTTATTTATTTATTTATTTTC...........................................................................................................................271.000.00-----1.00-------------------------------------
...............................................................................GTCAGGAAAGCCGAGACGC........................................................................................................................................................191.000.00--------------------------1.00----------------
...............................................................................GTCAGGAAAGCCGAGAGG.........................................................................................................................................................181.000.00---------------------------------------1.00---
..........................................................................................................................................................................................................AGGCTGCAATGTGAATTTTCTTCC........................2411.001.00--------1.00----------------------------------
...............AGCTGATTGCTGAACAGACTGGTGAGAAAAAA...........................................................................................................................................................................................................3211.001.00-------1.00-----------------------------------
.................................CTGGTGAGAAAAAAGAGGT......................................................................................................................................................................................................1911.001.00-------------------------1.00-----------------
.........................................................................................................TTTTATTTATTTATTTATTTTTTAATTG.....................................................................................................................281.000.00-1.00-----------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTCAAG.........................................................................................................................251.000.001.00------------------------------------------
..........................................................................................................................................................AGTTAGGATGCTGTTGTTTTTCCT........................................................................241.000.00-----1.00-------------------------------------
.............................................................................................................ATTTATTTATTTATTTTTTAAACTTG...................................................................................................................261.000.00-1.00-----------------------------------------
............................................................................................................TATTTATTTATTTATTTTTTAAACTTG...................................................................................................................271.000.00--1.00----------------------------------------
.....................................................................................................TTGCTTTTATTTATTTATTTATATTG...........................................................................................................................261.000.00-1.00-----------------------------------------
........................................................................................................CTTTTATTTATTTATTTATTTCTAA.........................................................................................................................251.000.001.00------------------------------------------
....................................................................................................................................................TAAAATAGTTAGGATGTTTG..................................................................................201.000.00---1.00---------------------------------------
........................................................................................................CTTTTATTTATTTATTTATCTTG...........................................................................................................................231.000.00----1.00--------------------------------------
........................CTGAACAGACTGGTG...................................................................................................................................................................................................................1530.330.33----------------------------------------0.33--
......................TGCTGAACAGACTGG.....................................................................................................................................................................................................................1590.110.11------------------------------------------0.11

Antisense strand
GGGCTGTGTTTGACCAGCTGATTGCTGAACAGACTGGTGAGAAAAAAGAGGTGAGGGTCCCCATCTTCTCAGGACATCTGTCAGGAAAGCCGAGTTTGAGTTTGCTTTTATTTATTTATTTATTTTTTAAAAAGGTGTTACTTGTAAGTAAAATAGTTAGGATGCTGTTGTTTTTCTTAGTGGAACATCTGTGCTTTATCCAAGGCTGCAATGTGAATTTTCTTCCTCAGCTGGACTATTTCTTCCTGTA
.......................................................................................................(((((((.((((((((((((........(((......)))))))))))).))).))))).)).....................................................................................
...................................................................................................100......................................................................172............................................................................
SizePerfect hitTotal NormPerfect NormSRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
TAX577738(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040035(GSM532920)
G001T. (cervix)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
.........................................AAAAAAGAGGTGAGGTTG............................................................................................................................................................................................... 182.000.002.00------------------------------------------
......................................................................................................................................................................................................................GAATTTTCTTCCTCAGCCAC................ 201.000.00-------------------------------------1.00-----
................................................................................................................................................................................................................CAATGTGAATTTTCTTCGTT...................... 201.000.00---------------1.00---------------------------
.................................CCTCTTTTTTCTCACCAG....................................................................................................................................................................................................... 1811.001.00----1.00--------------------------------------
.............................................................................................................................TTTAAAAAGGTGTTATCGG.......................................................................................................... 191.000.00------------------------1.00------------------
.........................................................TCCCCATCTTCTCAGAAAA.............................................................................................................................................................................. 191.000.00-------------------1.00-----------------------
........................................CCTCACCTCTTTTTTC.................................................................................................................................................................................................. 1690.110.11-----------------------------------------0.11-