ID: uc010zyo.2
GENE: RNF114(3)
chr20:48562473-48562722+


(1)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(3)
BRAIN 		(15)
BREAST 		(24)
CELL-LINE 		(2)
CERVIX 		(5)
HEART 		(6)
HELA 		(1)
KIDNEY 		(5)
LIVER 		(1)
OTHER 		(2)
RRP40.ip 		(14)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189782DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR343336SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................83139.0039.0034.00-3.00----2.00-------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................84122.0022.0020.00-2.00------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGA....................................................................................21115.0015.00-1.00-2.00-4.00--1.00-2.00-------------1.001.001.00---------------------------1.00--------1.00-----------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................83114.0014.0013.00-----1.00--------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAA...................................................................................22113.0013.00---2.002.00---1.00--3.00----------2.00-1.00--------------------------1.00---------------1.00-------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAA..................................................................................22110.0010.00--------1.00-------2.00----1.00----------------1.00--1.00--1.00---------------1.00-1.00---1.00--------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAA...................................................................................2119.009.00-------------------------------2.001.00-----------------1.00--1.00--------------1.00--------------1.00----1.00-1.00--
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAG..................................................2119.009.00-8.00--------------------------------------------------------------------1.00----------------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGT.................................................888.000.006.00-----2.00--------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8617.007.00--7.00------------------------------------------------------------------------------------------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTT......................................................8217.007.007.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAG..................................................2017.007.00-6.00------------1.00------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAA.................................................................................2216.006.00--------1.00------1.00------------------2.00----1.00---------------------------------------------1.00-------
..................................................................................................................................................AATGGAAAGGTACTCACAGA....................................................................................2016.006.00---------1.00------1.00----1.00-------------------------1.00-------------------------------1.00--1.00----------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGT.................................................2116.007.00-4.00----------------------------------------1.00-----------------------------------------1.00--------
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8116.006.00--6.00------------------------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAA..................................................................................2315.005.00----1.00----------1.00----------1.00------------------------------------------------1.00---------------1.00-
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTC.....................................................8215.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAG..................................................8515.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCA...................................................8415.005.005.00--------------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGT...............................................................................2414.004.00-----3.00---------------------------------------------------------------------------------1.00-----
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGT...............................................................................2314.004.00---------------------------2.00------------------1.00--------------------------1.00-------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTT..............................................................................2414.004.00----------1.00------------1.00-----2.00---------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGA.................................................2114.007.00------------------------------------------------1.001.00------------------------------------1.00-----1.00
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................8214.004.004.00--------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................CCAAACCGTTACACCTTTCCTTG....................2313.003.00-------------------2.00-------------------------1.00-----------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAG.....................................................................................2013.003.00-2.00--1.00----------------------------------------------------------------------------------------
........................................TTATTTTCACAACACTATG...............................................................................................................................................................................................193.000.00------------3.00--------------------------------------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGAA...................................................................................2313.003.00---3.00-----------------------------------------------------------------------------------------
................................................................................................................................................TTAATGGAAAGGTACTCACAGA....................................................................................2213.003.00---3.00-----------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8013.003.003.00--------------------------------------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAA...................................................................................2013.003.00---------------1.00---------1.00--------------------------1.00----------------------------------------
.....................................................................................................................................................................................CCTGTGTTTCACCTTCCAG..................................................1913.003.00-3.00-------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAA.................................................................................2113.003.00-------------------------------------------1.00-------------1.001.00----------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAG.....................................................................................1813.003.00-------------2.001.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCAGTT................................................2212.007.00--------------------------------1.00------------------------------------1.00-----------------------
..........................................................................................................................TGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCC....................................................7612.002.00------2.00--------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAA..................................................................................2012.002.00-------------------------------------1.00-----------------------1.00-------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................8612.005.002.00--------------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTT.............................................................................2512.002.00---------2.00-----------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGA.................................................2212.009.00------------------------------------------------------------------------1.00----------------1.00---
..................................................................................................................CTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACC........................................................8012.002.00-------2.00-------------------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAG.....................................................................................1912.002.00-1.00---------------------------------------------------------------------------1.00---------------
.........................................................................................................................................................................................................................ACACCTTTCCTTGTCCTTACTGTCCG.......261.000.00------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGAAAAGTTT.............................................................................2611.001.00---------------------------------1.00-----------------------------------------------------------
................................................................................................................TGCTCCTTTTTGGAGTGTACTGTGGTTG..............................................................................................................2811.001.00----1.00----------------------------------------------------------------------------------------
............................................................................................................................GAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTG...............................................................6311.001.00-------1.00-------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ACCTTTCCTTGTCCTACTG............191.000.00--------------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAAT.................................................221.000.00----1.00----------------------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAA.....................................................................................191.000.00--------------------1.00------------------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAGA..................................................................................2311.0015.00---------1.00-----------------------------------------------------------------------------------
....................................................................................................................CCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGA.................................................851.000.00-------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAGTTTTCTT.........................................................................2911.001.00------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................TAATGGAAAGGTACTCACAGAAAA.................................................................................2411.001.00--------1.00------------------------------------------------------------------------------------
...................................................................................................................TCCTTTTTGGAGTGTACT.....................................................................................................................1811.001.00-------------1.00-------------------------------------------------------------------------------
........................................................................................................................................................................AGTTTTCTTTTTTCCGGTT...............................................................191.000.00----------------------------1.00----------------------------------------------------------------
.............AACCACCACGCCCGGCCAGCTCCAC....................................................................................................................................................................................................................251.000.00-----------------------------------------------------------------1.00---------------------------
.................................................................................................................................................TAATGGAAAGGTACTCATAGA....................................................................................211.000.00-----1.00---------------------------------------------------------------------------------------
.................................................................................................................GCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCT.......................................................8211.001.00------1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGA...2011.001.00---1.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTC.........1911.001.00--------------------------------------------------------------------------------1.00------------
......................GCCCGGCCAGCTGAGGCGG.................................................................................................................................................................................................................191.000.00-----------------------1.00---------------------------------------------------------------------
................................CTGAGCTGTTATTTTGGGG.......................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------------1.00-----------
...................................................................................................................................................................................................................................TTGTCCTTACTGTCCTGAGAAG.2211.001.00-----------------------------------------------------------------------1.00---------------------
...................................................................................................................................................ATGGAAAGGTACTCACAGA....................................................................................1911.001.00------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAAAA................................................................................241.000.00--------------------------------------------------------------------------1.00------------------
...................................................................................................................................................................................TTCCTGTGTTTCACCTTCCAGT.................................................2211.009.00-1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AAACCGTTACACCTTTCCTTGTCC.................2411.001.00------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................AATGGAAAGGTACTCACAGAAG..................................................................................2211.009.00------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAAAAG................................................................................2211.001.00---------1.00-----------------------------------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGAA...................................................................................1911.001.00----1.00----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TTTCCTTGTCCTTACTGTCCTGA.....2311.001.00--------------------------------------------------------1.00------------------------------------
.........................................................................................................................................................................................................AATGTTCCAAACCGTTACACCTTTCC.......................2611.001.00-----------------------------------------------------------1.00---------------------------------
..................................................................................................................................................................................TTTCCTGTGTTTCACCTTCCAGT.................................................231.000.00----1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TTCCTTGTCCTTACTGTCCTGAGAAGA2711.001.00----------------------------------------------------------------------------1.00----------------
...TACAGGCGTAAACCACCACGCCCGGCCC...........................................................................................................................................................................................................................281.000.00----------------------------1.00----------------------------------------------------------------
.............................................................................................................................................................................................................TTCCAAACCGTTACACCTTTCCTTGA...................261.000.00-----------------------------------1.00---------------------------------------------------------
....................................................................................................................................................TGGAAAGGTACTCACAGA....................................................................................1811.001.00-------------------------------------------------------1.00-------------------------------------
....................................................................................................................................................................................TCCTGTGTTTCACCTTCCA...................................................1920.500.50------------------0.50--------------------------------------------------------------------------
.......................................................................................................................................................................................................................TTACACCTTTCCTTG....................1590.220.22-------------------0.11---------------0.11---------------------------------------------------------

Antisense strand
GATTACAGGCGTAAACCACCACGCCCGGCCAGCTGAGCTGTTATTTTCACAACACTTGACCTGAGTCTGAAGTGATCATCAGCATCCTTATCATTACACATTTGGTGAGCTTTGCTCCTTTTTGGAGTGTACTGTGGTTGAAGTTTAATGGAAAGGTACTCACAGAAAAGTTTTCTTTTTTCCTGTGTTTCACCTTCCAGGAATGTTCCAAACCGTTACACCTTTCCTTGTCCTTACTGTCCTGAGAAGA
....................................................................................................................................................(((.(((((...((((((((((......)))))).))))....))))))))...................................................
............................................................................................................................................141........................................................200................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR189782DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR343336SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR189785TAX577739(Rovira)
total RNA. (breast)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR040043(GSM532928)
G428T. (cervix)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334SRR189784SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)		SRR038858(GSM458541)
MEL202. (cell line)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029130(GSM416759)
DLD2. (cell line)		SRR189786SRR029132(GSM416761)
MB-MDA231. (cell line)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR444066(SRX128914)
Sample 23cDNABarcode: AF-PP-339: ACG CTC TTC . (cell line)		SRR343335SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		TAX577746(Rovira)
total RNA. (breast)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR191613(GSM715723)
66genomic small RNA (size selected RNA from t. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577589(Rovira)
total RNA. (breast)		TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038856(GSM458539)
D11. (cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
............AAACCACCACGCCCGTGT............................................................................................................................................................................................................................ 182.000.00-----------------2.00---------------------------------------------------------------------------
............AAACCACCACGCCCGTGG............................................................................................................................................................................................................................ 181.000.00---------------------------------1.00-----------------------------------------------------------
............AAACCACCACGCCCGCGG............................................................................................................................................................................................................................ 181.000.00----------------------------------------1.00----------------------------------------------------
............AAACCACCACGCCCGGGTG........................................................................................................................................................................................................................... 191.000.00-----------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................GGAAAGGTGTAACGG....................... 1511.001.00----------------------------------------------------------------1.00----------------------------
....................................................................................................................................................................................................................................TGTCCTTACTGTCCTGCA.... 181.000.00------------------------------------------------------------------------------1.00--------------
..................................................................................................................................ACTGTGGTTGAAGTTCTAA..................................................................................................... 191.000.00--------------------1.00------------------------------------------------------------------------