ID: uc010zvt.1_intron_21_0_chr20_35717526_r.3p
GENE: (1)
chr20:35717476-35717725-


(2)
BREAST 		(4)
CELL-LINE 		(1)
CERVIX 		(1)
LIVER 		(3)
OTHER 		(2)
SKIN

Sense strand
CACAGAACTAAGAGTAAGGAGTTTTATACCCATTACTGCAACTAACAGCTTTGTGACCTTGGGCAAATATCTTCACTTCTCTGGCCCTTTATCTACATAAGGAAAATTGAGACCAGATAATTCTACATCTCTTGTTTCTAGAATTAAAGCATTTTAACATAATATTATACCTGTTTTGCTGTTTGTCTTTTGCTTGCCAGGGAGAAGTTACACACTGGTTGGCATGTTCATTATATGTTGCATGCCGCAA
..............................................................((((((...........(((((..((((((....))))))......((((..(((....)))...))))......))))).....((((....((((............)))).))))))))))................................................................
.............................................................62..........................................................................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189782SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189787SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
.....................................................................................................................................................................TATACCTGTTTTGCTTG....................................................................17133.000.00133.00------------
.....................................................................................................................................................................TATACCTGTTTTGCTTGA...................................................................1872.000.0046.0024.00--1.00-----1.00--
.....................................................................................................................................................................TATACCTGTTTTGCTTGAT..................................................................1940.000.0027.0011.00--2.00--------
.....................................................................................................................................................................TATACCTGTTTTGCTTGAA..................................................................192.000.001.001.00-----------
.............................................................................................................................................................................TTTTGCTGTTTGTCTTGAG..........................................................192.000.00-----2.00-------
....................................................................................................................................................................TTATACCTGTTTTGCTTG....................................................................182.000.002.00------------
..................................................................ATATCTTCACTTCTCAAG......................................................................................................................................................................182.000.00---2.00---------
.....................................................................................................................................................................TATACCTGTTTTGCTTGT...................................................................182.000.002.00------------
.......................................................................................................................................................................................................................TGGTTGGCATGTTCATAATG...............201.000.00------1.00------
.....................................................................................................................................................................TATACCTGTTTTGCTTTAT..................................................................191.000.001.00------------
.............................................................................................................................................................................................................AGTTACACACTGGTTGGC...........................1811.001.00-------1.00-----
............................................................................................................................................................................................................AAGTTACACACTGGTTGGCATGTTCA....................2611.001.00-----------1.00-
................................................CTTTGTGACCTTGGGCAAATATCTTCAC..............................................................................................................................................................................2811.001.00------------1.00
.....................................................................................................................................................................TATACCTGTTTTGCTCG....................................................................171.000.001.00------------

Antisense strand
CACAGAACTAAGAGTAAGGAGTTTTATACCCATTACTGCAACTAACAGCTTTGTGACCTTGGGCAAATATCTTCACTTCTCTGGCCCTTTATCTACATAAGGAAAATTGAGACCAGATAATTCTACATCTCTTGTTTCTAGAATTAAAGCATTTTAACATAATATTATACCTGTTTTGCTGTTTGTCTTTTGCTTGCCAGGGAGAAGTTACACACTGGTTGGCATGTTCATTATATGTTGCATGCCGCAA
..............................................................((((((...........(((((..((((((....))))))......((((..(((....)))...))))......))))).....((((....((((............)))).))))))))))................................................................
.............................................................62..........................................................................................................................186..............................................................
SizePerfect hitTotal NormPerfect NormSRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189782SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR189787SRR189784DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
...................................................................................................................................................AGCATTTTAACATAATC...................................................................................... 174.000.00--4.00----------
...................................CTGCAACTAACAGCTTAAT.................................................................................................................................................................................................... 191.000.00--------1.00----
......................................................................................................................................................................................TTGTCTTTTGCTTGCCGTC................................................. 191.000.00---------1.00---
..........................................................................................................................................................................................................................TTGGCATGTTCATTATAAT............. 191.000.00---1.00---------