ID: uc010zpc.1_intron_9_0_chr2_242690804_f.3p
GENE: D2HGDH(10)
chr2:242693846-242694095+


(2)
B-CELL
(7)
CELL-LINE
(1)
CERVIX
(1)
HEART
(1)
HELA
(2)
LIVER
(2)
OTHER
(7)
SKIN
(1)
TESTES

Sense strand
CCCAGGAGTTTGAGACGAGCCTGGGCAACATCGGGAGACTTCAAAAAAACAAAAAATTGATGGTGGGGAAATGCGGGAATTTTGGGCGCCGGCCGGATTCCCAGTGGTGGCGAGGAGGTGGTATTTTTTTAAGTGTCAGTGTGGCATTGTGGTTGCCTCAATAAAACAGAGTCTTTTTTTGTCTTTTTTTTTTGAGACAGGGTCTCGCTCTCACCCAGGCTGGAGTGCAGTGACACAGTTGCAGCTCACT
...................................................................................(((((((.((((..((((..((....))..)))).)))).........((((((.....))))))..))).)))).....................((((((........))))))...................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040030(GSM532915)
G013N. (cervix)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786
.......................................................................................GCCGGCCGGATTCCC....................................................................................................................................................1518.008.00--5.001.00--------1.00----------1.00--
.............................................................................................................................................................................TTTTTTTGTCTTTTTTTTTTGGTAG....................................................255.000.002.003.00------------------------
................................................................................................................................................................................TTTTGTCTTTTTTTTTTAAGC.....................................................213.000.003.00-------------------------
.......................................................................................GCCGGCCGGATTCCCGTC.................................................................................................................................................1813.008.00--------------1.00----1.00-1.00----
.....................................................................................................................................................................................................................CCCAGGCTGGAGTGCAGTGACACACCGC.........282.000.002.00-------------------------
................................................................................................................................................................................................................TCTCACCCAGGCTGGAGTGCAGTGACGCG.............292.000.001.001.00------------------------
...............................................................................................................................................................................................................CTCTCACCCAGGCTGGAGGGGA.....................221.000.001.00-------------------------
.........................................................................................................................................................................AGTCTTTTTTTGTCTTTTTTTTTCTTC......................................................271.000.00-1.00------------------------
..................................................................................................................................................................................................................TCACCCAGGCTGGAGTGCAGTGACTGT.............271.000.00--------------------1.00-----
....................................................................................................................................................................................................ACAGGGTCTCGCTCTCACCCAGGCCGG...........................271.000.001.00-------------------------
...........................................................................................................................................................................TCTTTTTTTGTCTTTTTTTTG..........................................................211.000.00-----------1.00--------------
..............ACGAGCCTGGGCAACGGCG.........................................................................................................................................................................................................................191.000.001.00-------------------------
....................................................AAAATTGATGGTGGGACAA...................................................................................................................................................................................191.000.00-----1.00--------------------
..................................................................................................................................................................................................AGACAGGGTCTCGCTCTCATCC..................................221.000.001.00-------------------------
.....................................................................................................................................................................................TCTTTTTTTTTTGAGACAGGGTCTGGT..........................................271.000.00-1.00------------------------
.............................................................................................CGGATTCCCAGTGGTGGCGAGGAGGTGG.................................................................................................................................2811.001.00----1.00---------------------
..........TGAGACGAGCCTGGGCAACAGTG.........................................................................................................................................................................................................................231.000.001.00-------------------------
.....................................................................................................................................................................................................................CCCAGGCTGGAGTGCAGTGACACAGGA..........271.000.00-----------------1.00--------
.............................................................................................................................................................................TTTTTTTGTCTTTTTTTTCTAT.......................................................221.000.00------1.00-------------------
.........................................................................................................................................................................................TTTTTTTTGAGACAGGGTCTCGCCG........................................251.000.001.00-------------------------
..................................................................................................................................................................................................................TCACCCAGGCTGGAGTGCAGTGACACAGTTGC........3211.001.00---1.00----------------------
................................................................................................................................................................................TTTTGTCTTTTTTTTTTGCCCC....................................................221.000.001.00-------------------------
...........................................................................................................................................................................TCTTTTTTTGTCTTTTTTTTTGAAG......................................................251.000.001.00-------------------------
.....................................................................................................................................................................................TCTTTTTTTTTTGAGACAGGCTGA.............................................241.000.00-1.00------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTCTGG......................................................221.000.001.00-------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTCGTT.......................................................211.000.00------1.00-------------------
...............................................................................................................................................................................................................CTCTCACCCAGGCTGGAGTGCAGTGACGCG.............301.000.001.00-------------------------
...AGGAGTTTGAGACGAGCCTGGGCATGGC...........................................................................................................................................................................................................................281.000.001.00-------------------------
........................................................TTGATGGTGGGGAAATGGCG..............................................................................................................................................................................201.000.00--------1.00-----------------
....................................................................................................................................................................................................ACAGGGTCTCGCTCTCACCCAGGCTG............................2621.001.00-1.00------------------------
..........................................................................................................................ATTTTTTTAAGTGTCAGTTCAG..........................................................................................................221.000.00-1.00------------------------
..................................................................................................................................................................................................AGACAGGGTCTCGCTCTCACCCAGG...............................2521.001.000.500.50------------------------
...AGGAGTTTGAGACGAGATTC...................................................................................................................................................................................................................................201.000.00---------1.00----------------
.........................................................................................CGGCCGGATTCCCAGGACT..............................................................................................................................................191.000.00----------1.00---------------
.............................................................................AATTTTGGGCGCCGGCCGGATTCCCA...................................................................................................................................................2611.001.00---------------1.00----------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTAGC.......................................................211.000.001.00-------------------------
............................................................................................................................................................................CTTTTTTTGTCTTTTTTTTTTAAC......................................................241.000.00-------1.00------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTGGAGA....................................................241.000.001.00-------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTCTGG.....................................................231.000.001.00-------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTGAGAGC...................................................251.000.00-1.00------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTGGTAG....................................................241.000.001.00-------------------------
..................................................................................................................................................................................................................TCACCCAGGCTGGAGTGCAGTGACCTTG............281.000.001.00-------------------------
..........TGAGACGAGCCTGGGCAACGGC..........................................................................................................................................................................................................................221.000.00-1.00------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTCGG......................................................221.000.001.00-------------------------
.............................................................................................................................................................................TTTTTTTGTCTTTTTTTTTTGGGAG....................................................251.000.001.00-------------------------
...............................................................................................................................................................................TTTTTGTCTTTTTTTTAAAG.......................................................201.000.00-------1.00------------------
....................................................................................................................................................................................................................ACCCAGGCTGGAGTGCAGTGACACCGC...........271.000.001.00-------------------------
.............................................................................................................................................................................TTTTTTTGTCTTTTTTTTTTGGTA.....................................................241.000.00-1.00------------------------
..................................................................................................................................................................................................AGACAGGGTCTCGCTCTCACCCAG................................2421.001.001.00-------------------------
................................................................................................................................................................................TTTTGTCTTTTTTTTTTGCC......................................................201.000.001.00-------------------------
....................................................AAAATTGATGGTGGGACA....................................................................................................................................................................................181.000.00-----1.00--------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTAGC........................................................201.000.00-1.00------------------------
....................................................................................................................................................................................................ACAGGGTCTCGCTCTCACCCAGGCTGGAG.........................2911.001.001.00-------------------------
........TTTGAGACGAGCCTGGGCAACAGTG.........................................................................................................................................................................................................................251.000.00-1.00------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTGGGC.....................................................231.000.00-1.00------------------------
..............................................................................................................................................................................TTTTTTGTCTTTTTTTTTTAAGC.....................................................231.000.001.00-------------------------
.........................................................................CGGGAATTTTGGGCGC.................................................................................................................................................................1611.001.00----1.00---------------------
.............................................................................................................................................................................TTTTTTTGTCTTTTTTTTACGG.......................................................221.000.00-1.00------------------------
............AGACGAGCCTGGGCAGGG............................................................................................................................................................................................................................181.000.00------------------1.00-------
.....................................................................AATGCGGGAATTTTGGGCGCCGGC.............................................................................................................................................................2411.001.00----------------------1.00---
.......................................................................................GCCGGCCGGATTCCCGTCG................................................................................................................................................1911.008.00----------------1.00---------
............................................................................................................................................................................CTTTTTTTGTCTTTTTTTAAAG........................................................221.000.00------------------------1.00-
..................................................................................................................................................................................................AGACAGGGTCTCGCTCTCACCCAGGCTGATG.........................311.000.00-1.00------------------------
.....................................................................................................................................................................................TCTTTTTTTTTTGAGACAGGGGG..............................................231.000.001.00-------------------------
...............................................................................................................................................................................................TTGAGACAGGGTCTCGCTCTCACCC..................................2530.670.670.33------------------------0.33
................................................................................................................................................................................................TGAGACAGGGTCTCGCTCTCACCCAGG...............................2720.500.500.50-------------------------
......................................................................................................................................................................................................AGGGTCTCGCTCTCACCCAGGCTGGAGTGC......................3020.500.500.50-------------------------
............................................................................................................................................................................CTTTTTTTGTCTTTTTTTTTTGAG......................................................2420.500.500.50-------------------------
................................................................................................................................................................................................TGAGACAGGGTCTCGCTCTCACCCAGGG..............................2820.500.50-0.50------------------------
...............................................................................................................................................................................................TTGAGACAGGGTCTCGCTCTCACCCA.................................2620.500.50--------0.50-----------------

Antisense strand
CCCAGGAGTTTGAGACGAGCCTGGGCAACATCGGGAGACTTCAAAAAAACAAAAAATTGATGGTGGGGAAATGCGGGAATTTTGGGCGCCGGCCGGATTCCCAGTGGTGGCGAGGAGGTGGTATTTTTTTAAGTGTCAGTGTGGCATTGTGGTTGCCTCAATAAAACAGAGTCTTTTTTTGTCTTTTTTTTTTGAGACAGGGTCTCGCTCTCACCCAGGCTGGAGTGCAGTGACACAGTTGCAGCTCACT
...................................................................................(((((((.((((..((((..((....))..)))).)))).........((((((.....))))))..))).)))).....................((((((........))))))...................................................
..................................................................................83...................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189782SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR040030(GSM532915)
G013N. (cervix)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR553576(SRX182782)
source: Testis. (testes)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189786
.............................................................................................................................................................................................................CGCTCTCACCCAGGCTGGAGTGCAGTCG................. 281.000.001.00-------------------------
........................................TCAAAAAAACAAAAAATCGT.............................................................................................................................................................................................. 201.000.00-1.00------------------------
.........................................................................................................................................................................................................................GGCTGGAGTGCAGTGACACAGGCG......... 241.000.001.00-------------------------
.......................................................................................................................................................................................................................CAGGCTGGAGTGCAGTGACACAGTAGCG....... 281.000.001.00-------------------------
.........................................................................................................................................................................................................................GGCTGGAGTGCAGTGACACAGTGGCG....... 261.000.00-1.00------------------------
.........................................................................................................................................................................................................................GGCTGGAGTGCAGTGACACAGTCAGG....... 261.000.00-1.00------------------------
.........................................................................................................................................................................................................................GGCTGGAGTGCAGTGACACAGGGC......... 241.000.001.00-------------------------
.........................................................................................................................................................................................................................GGCTGGAGTGCAGTGACACAGTGGGC....... 261.000.00-1.00------------------------
.................................................................................................................................................................................................GAGACAGGGTCTCGCTCTCACCCAGGCTC............................ 291.000.001.00-------------------------
...................................................................................................................................................................................................................AACTGTGTCACTGCACTCCAGCCTGGGTG.......... 2921.001.00-1.00------------------------
........TTTGAGACGAGCCTGAA................................................................................................................................................................................................................................. 171.000.00-------------1.00------------
.....................................................................................................................................................................................................AGCCTGGGTGAGAGCGAGACCCTG............................. 2430.330.330.33-------------------------