ID: uc010zoq.1_intron_2_0_chr2_242343348_f.5p
GENE: (3)
chr2:242343298-242343547+


(1)
AGO2.ip 		(7)
B-CELL 		(11)
BRAIN 		(16)
BREAST 		(17)
CELL-LINE 		(1)
HELA 		(1)
LIVER 		(4)
OTHER 		(5)
SKIN

Sense strand
TAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGGTAAGTGCTTATGACGTGCCCAGGCGTGGAGCCTTTGGGCCTGCTGTGATGACAGCCGCAAGATCTTTCATCATTGCCACATCATCAGCATTAAATGTTTTTGCTATTAAAATATATTCTTGTTAGCTGTAGAGAATATGTCTGCCTTTAATCCAAGCCTGAATTCACACTCTCCCTAAATGTGTTCTGTTTGTTAGCAC
...........................................................................................((((((((((......(((((((.....))).))))..))))).)))))....(((((((.......))))))).....................................................................................
.....................................................................................86.................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR029131(GSM416760)
MCF7. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029127(GSM416756)
A549. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782
..........................................................................................CTGCTGTGATGACAGTCCA.............................................................................................................................................1944.000.0018.001.005.001.001.002.00---2.002.00----1.00----1.001.002.00-------1.001.00----1.001.00-1.00-----1.00-------1.00--------
..........................................................................................CTGCTGTGATGACAGTCC..............................................................................................................................................1822.000.00-1.00-3.00--1.00-2.00---1.00--1.00--2.001.00-1.00--1.002.001.00-------1.001.00------1.00---------1.00--1.00------
..........................................................................................CTGCTGTGATGACAGTC...............................................................................................................................................1715.000.00-2.00--1.00-1.00-------2.00-----1.00-------------------1.001.00-1.00---1.001.00-1.00-----1.001.00----
..........................................................................................CTGCTGTGATGACAGTACA.............................................................................................................................................196.000.00-1.00--2.00-1.00----------------1.00-----------------------------------1.00--
.....................................................................CCAGGCGTGGAGCCTGCG...................................................................................................................................................................183.000.00--------1.00----1.00-------------------1.00----------------------------
..........................................................................................CTGCTGTGATGACAGTCAA.............................................................................................................................................192.000.00------1.00-----1.00-------------------------------------------------
..........................................................................................CTGCTGTGATGACAGCACT.............................................................................................................................................191.000.00-----------------------1.00--------------------------------------
.............CTTCGGGATGGAGTTTCAAAATACTCA..................................................................................................................................................................................................................2711.001.00---------------------------1.00----------------------------------
.................................ATACTCAGTCCTACTGG........................................................................................................................................................................................................1711.001.00----------------------------------------------1.00---------------
.....................................................................CCAGGCGTGGAGCCTGCGG..................................................................................................................................................................191.000.00----------------------------------------------------------1.00---
..........................................................................................CTGCTGTGATGACAGGGAA.............................................................................................................................................191.000.00---------------------------------------------------1.00----------
..........................................................................................CTGCTGTGATGACAGCGTA.............................................................................................................................................191.000.00-------------------1.00------------------------------------------
..................................................................................................................................................GTTTTTGCTATTAAATATA.....................................................................................191.000.00----------------1.00---------------------------------------------
............ACTTCGGGATGGAGTTTCAAAATACTC...................................................................................................................................................................................................................2711.001.00--------------------------------------------1.00-----------------
..................GGATGGAGTTTCAAAATACCCAG.................................................................................................................................................................................................................231.000.00-----------1.00--------------------------------------------------
..........................................................................................CTGCTGTGATGACAGGC...............................................................................................................................................171.000.00-1.00------------------------------------------------------------
..........................................................................................CTGCTGTGATGACAGTAT..............................................................................................................................................181.000.00-----1.00--------------------------------------------------------
.........................................................................................CCTGCTGTGATGACATTA...............................................................................................................................................181.000.00------------------------1.00-------------------------------------
...................GATGGAGTTTCAAAATACCCA..................................................................................................................................................................................................................211.000.00--------------------------------1.00-----------------------------
..........................................................................................CTGCTGTGATGACAGTCA..............................................................................................................................................181.000.00------------------------------------------------------1.00-------
...............TCGGGATGGAGTTTCAAAA........................................................................................................................................................................................................................1911.001.00---------1.00----------------------------------------------------
..........................................................................................CTGCTGTGATGACAGTTCA.............................................................................................................................................191.000.00-----1.00--------------------------------------------------------
.......TGACTACTTCGGGATGGAGTTT.............................................................................................................................................................................................................................2211.001.00--------------------------------------1.00-----------------------
..........................................................................................CTGCTGTGATGACAGTAC..............................................................................................................................................181.000.00---1.00----------------------------------------------------------
...................................................................................................................................................................ATATTCTTGTTAGCTGTAGAG..................................................................2111.001.00----------------------------1.00---------------------------------
...................................................................................................................................................................................................................................AAATGTGTTCTGTTTGTTAC...201.000.00-----------------------------1.00--------------------------------
................CGGGATGGAGTTTCAAAATACTCAGTC...............................................................................................................................................................................................................2711.001.00-------------1.00------------------------------------------------
..........................................................................................CTGCTGTGATGACAGGCA..............................................................................................................................................181.000.00--------------------------1.00-----------------------------------
..............................................................................................................................CCACATCATCAGCATTATTT........................................................................................................201.000.00-----------1.00--------------------------------------------------
..................................................................................................................................................................TATATTCTTGTTAGC.........................................................................1570.140.14------------------------------------------------------------0.14-
......................................................................................................................................................................................................................TCACACTCTCCCTAA.....................1580.120.12-------------------------------------------------------------0.12

Antisense strand
TAGAATGTGACTACTTCGGGATGGAGTTTCAAAATACTCAGTCCTACTGGGTAAGTGCTTATGACGTGCCCAGGCGTGGAGCCTTTGGGCCTGCTGTGATGACAGCCGCAAGATCTTTCATCATTGCCACATCATCAGCATTAAATGTTTTTGCTATTAAAATATATTCTTGTTAGCTGTAGAGAATATGTCTGCCTTTAATCCAAGCCTGAATTCACACTCTCCCTAAATGTGTTCTGTTTGTTAGCAC
...........................................................................................((((((((((......(((((((.....))).))))..))))).)))))....(((((((.......))))))).....................................................................................
.....................................................................................86.................................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR029131(GSM416760)
MCF7. (cell line)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR029127(GSM416756)
A549. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343334GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577740(Rovira)
total RNA. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		TAX577742(Rovira)
total RNA. (breast)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577745(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		TAX577746(Rovira)
total RNA. (breast)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)		SRR189786SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR038853(GSM458536)
MELB. (cell line)		TAX577453(Rovira)
total RNA. (breast)		GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782
................................................................................................................ATCTTTCATCATTGCGGA........................................................................................................................ 183.000.00-------1.00---------2.00--------------------------------------------
........................................................................................................................................AGCATTAAATGTTTTCCA................................................................................................ 182.000.00-------2.00------------------------------------------------------
..................................................................................................................CTTTCATCATTGCCACAGGCA................................................................................................................... 211.000.00----------------1.00---------------------------------------------
.................................................................................................................TCTTTCATCATTGCCACAGCTG................................................................................................................... 221.000.00-------------------------------------------------1.00------------
...AATGTGACTACTTCGGC...................................................................................................................................................................................................................................... 171.000.00----------1.00---------------------------------------------------