ID: uc010zlz.1_intron_3_0_chr2_230664046_r.3p
GENE: TRIP12(4)
chr2:230663996-230664245-


(2)
AGO2.ip 		(6)
B-CELL 		(7)
BRAIN 		(6)
BREAST 		(20)
CELL-LINE 		(1)
CERVIX 		(1)
FIBROBLAST 		(6)
HEART 		(2)
HELA 		(9)
LIVER 		(3)
OTHER 		(15)
SKIN 		(1)
TESTES 		(2)
UTERUS 		(1)
XRN.ip

Sense strand
GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGACAGTATTTTATTACTCCCTGTTTCTGCCATTTTAGTTTGCTTTTTCAGTGAGTGAAGATATAAAACAGTGGTAATTGCTAAACTTATCTCATATTTTCCCATGGACAGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACAATCAAGGTA
.........................................................................................................................................................(((....((((....))))....)))...........((((.....))))...............................................
....................................................................................................................................................149......................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGACAA........2118.008.00--2.00---------3.00--3.00------------------------------------------------------------------
...........................................................................................................................................................TGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAG............8318.008.00-8.00--------------------------------------------------------------------------------
..............................................................................................................................................................................CGACTGCCAAAACGAGGGCCAAGAAGATC...............................................296.000.00---------6.00------------------------------------------------------------------------
........................................................................................................................................................................................AACGAGGGCCAAGAAGGC................................................1816.006.00--------6.00-------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGATGATGACAAAGTAGACAATA......255.000.004.00-----1.00---------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACA.........1815.005.00-------1.00-----1.002.00-----------------------------------------------------1.00-------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGACAAT.......2514.004.00---1.00-------2.00-------------------------------------------1.00--------------------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGAC..........2214.004.00---2.00-----------------------------------------------------------------1.00--1.00---------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGACA.........2314.004.001.00-------------------------------------------------------------1.001.00---------1.00--------
.........................................................................................................................................................AGTGATGTTCTAAAGAGA...............................................................................1813.003.00---------------------3.00------------------------------------------------------------
.....................................................................................................................................................................................................................................ACAAAGTAGACAATCAAG...1813.003.00------------------------------2.00----------------------------1.00----------------------
...........................................................................................................................................................................................................................AGAGATGATGACAAAGTAGACAATCAAG...2813.003.001.00-----1.00-------------------1.00-------------------------------------------------------
............................................................................................................................................................................................AGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACAATCAAGCT.613.000.00-3.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGATGATGACAAAGTAGAC..........2113.003.00-----------1.00-----1.00-------------------------------1.00--------------------------------
.............................................................................................................................................................................ACGACTGCCAAAACGAGGGCC........................................................2113.003.00--3.00-------------------------------------------------------------------------------
.................................................................................................................................................................................................CAAGAAGGCCAAAGTACTCAC....................................2112.002.00------------------------2.00---------------------------------------------------------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGACAAT.......2212.002.00----------------2.00-----------------------------------------------------------------
........................................................................................................................................................................................................................CCAAGAGATGATGACAAAGTAGAC..........2412.002.00------------------2.00---------------------------------------------------------------
..............................................................................................................................................................................................................................GATGATGACAAAGTAGACAAT.......2112.002.001.00------1.00--------------------------------------------------------------------------
............................................................................................................................................................................AACGACTGCCAAAACGAGGG..........................................................2012.002.00--1.00---------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................AGAGATGATGACAAAGTAGACA.........2212.002.00------2.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGACAATC......2312.002.00---1.00---------------1.00--------------------------------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACA.........2112.002.00---2.00------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGACAATC......2612.002.00-------------------1.00---------------------------------------------------------1.00----
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACAA........1912.002.00----1.00-----------------------------------------------------------------------1.00-----
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAG...............2012.002.00----2.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................GCCAAGAAGGCCAAAGTACTCAC....................................2312.002.00-----------------2.00----------------------------------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACAATCA.....2512.002.00---1.00-------------------------------------------------1.00----------------------------
......................................................................................................................................................................AGAGAAAACGACTGCCAAA.................................................................1911.001.00--1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAGAC..........2511.001.00----------1.00-----------------------------------------------------------------------
....................CCACCGCGCCCGGCCTGACAGCATC.............................................................................................................................................................................................................251.000.00-----1.00----------------------------------------------------------------------------
.................................................................................................................................................................TCTAAAGAGAAAACGACTGC.....................................................................2011.001.00-------------------------------1.00--------------------------------------------------
...........................................................................................................................................................................................................................AGAGATGATGACAAAGTAGACAA........2311.001.00----1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................ATGACAAAGTAGACAATCAAG...2111.001.00---------------------------------------------------------------------------1.00------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGACA.........2011.001.00----1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................AAAACGACTGCCAAAACGAGGGC.........................................................2311.001.00------------------------------------1.00---------------------------------------------
........................................................................................................................................................................AGAAAACGACTGCCAAAACGAGGG..........................................................2411.001.001.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................AGAAGGCCAAAGTACTCA.....................................1811.001.00-------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................AAAACGAGGGCCAAGAAG..................................................1811.001.00----------------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................AGAAGGCCAAAGTACTCAC....................................1911.001.00------------------------------------------------------------1.00---------------------
......................................................................................................................................................................................................................CTCCAAGAGATGATGACAAAGTAGAC..........2611.001.00--------------1.00-------------------------------------------------------------------
.........................................................................................................................................................................................................................CAAGAGATGATGACAAAGTAGACAATCAAG...3011.001.00----------------------------------------------------------------1.00-----------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAGACAATA......291.000.001.00---------------------------------------------------------------------------------
........................................................................................................................................................................................................................................AAGTAGACAATCAAGCTA181.000.00-------1.00--------------------------------------------------------------------------
......................................................................................................................................................................AGAGAAAACGACTGCCAAAACGAGGG..........................................................2611.001.00----------------------------1.00-----------------------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACAATCAAG...2711.001.00-------------1.00--------------------------------------------------------------------
................................................................................................................................................................................................................................TGATGACAAAGTAGACAATCA.....2111.001.00-------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................................................CTCCAAGAGATGATGACAAAG...............2111.001.00------------------------------------------------1.00---------------------------------
..............................................................................................................................................................................CGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGAC..........6611.001.00-------------------------------------------------------------------------------1.00--
....................................................................................................................................................................AAAGAGAAAACGACTGCC....................................................................1811.001.00---------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACAA........2211.001.00-----------1.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACAATCAAGCT.261.000.00-----------------------------------1.00----------------------------------------------
.......................................................................................................................................................TAAGTGATGTTCTAAAGAGAAAACG..........................................................................2511.001.00----------------------------------------------1.00-----------------------------------
.........................................................................................................................................................AGTGATGTTCTAAAGAGAAAACG..........................................................................2311.001.00--1.00-------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACAATCAAGCTA271.000.00-------------------------------------------1.00--------------------------------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAGA...........2411.001.00--------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................................GCCAAGAAGGCCAAAGTACTCACC...................................2411.001.00------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAG............2011.001.00--------------------------------1.00-------------------------------------------------
..................................................................................................................................................................CTAAAGAGAAAACGACTGCCAAAACGA.............................................................2711.001.00--------------------------------------------------------------------------------1.00-
....................................................................................................................................................................................................................ACCTCCAAGAGATGATGACAAAGT..............2411.001.00----1.00-----------------------------------------------------------------------------
...........................................................................................................................................................................AAACGACTGCCAAAACGAGGA..........................................................211.000.00--------------------------------------1.00-------------------------------------------
.................................................................................................................................................................TCTAAAGAGAAAACGACTGCCAAAACG..............................................................2711.001.00-------------------------------------------------------------1.00--------------------
.........ACAGGCGTGAGCCACCGCGCGGCA.........................................................................................................................................................................................................................241.000.00-----1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGATA.........211.000.00------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................CTCCAAGAGATGATGA....................1631.001.00-----------------------------------------------------------------1.00----------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAGACAATCA.....3011.001.00----------1.00-----------------------------------------------------------------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTA.............2211.001.001.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GATGACAAAGTAGACAATCAAG...2211.001.00----------------------------------------------------------1.00-----------------------
....................................................................................................................................................................AAAGAGAAAACGACTGCCAAA.................................................................2111.001.00-------1.00--------------------------------------------------------------------------
........................................................................................................................................................................................................................CCAAGAGATGATGACAAAGTAGACAA........2611.001.00---------------------------------------1.00------------------------------------------
.........................................................................................................................................................................................................................CAAGAGATGATGACAAAG...............1811.001.00------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................ACGACTGCCAAAACGAGG...........................................................1811.001.00--1.00-------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAGACAATCAA....3111.001.00---------------------------------1.00------------------------------------------------
.............................................................................................................................................................................ACGACTGCCAAAACGAGGGC.........................................................2011.001.00--------------------------------------------1.00-------------------------------------
..............................................................................................................................................................................CGACTGCCAAAACGAGGGCCAAGAA...................................................2511.001.00-------------------------1.00--------------------------------------------------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACAATCAAGAA.2911.001.00-------------------------------------------------------------------1.00--------------
............................................................................................................................................................................................................................GAGATGATGACAAAGTAGACAAT.......2311.001.00-------------------1.00--------------------------------------------------------------
....................................................................................................................................................GATTAAGTGATGTTCTAAAGAGAAAACG..........................................................................2811.001.00------------------1.00---------------------------------------------------------------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGAC..........1911.001.00------------------------------------------------------------------1.00---------------
......ATTACAGGCGTGAGCCACCGCGCCCGGGTC......................................................................................................................................................................................................................301.000.00-----1.00----------------------------------------------------------------------------
...................................................................................................................................................................TAAAGAGAAAACGACTGCCAAAACGAG............................................................2711.001.00--------------------------1.00-------------------------------------------------------
........................................................................................................................................................................................................................CCAAGAGATGATGACAAA................1811.001.001.00---------------------------------------------------------------------------------
.............................................................................................................................................................................ACGACTGCCAAAACGAGAACC........................................................211.000.00--1.00-------------------------------------------------------------------------------
......................................................................................................................................................................................AAAACGAGGGCCAAGAAGG.................................................1911.001.00-------------1.00--------------------------------------------------------------------
.....................................................................................................................................................................................................................CCTCCAAGAGATGATGACAAAGTAGA...........2611.001.00---------------------------1.00------------------------------------------------------
........................CGCGCCCGGCCTGACAGTATTTTA..........................................................................................................................................................................................................2411.001.00------1.00---------------------------------------------------------------------------
..........................................................................................................................................................................AAAACGACTGCCAAAACGAGGGCCAAGA....................................................2811.001.00-----------------------------------------1.00----------------------------------------
..............................................................................................................................................................................................................................GATGATGACAAAGTAGACAATCAAGC..261.000.00-----------------------------------------------1.00----------------------------------
............................................................................................................................................................................AACGACTGCCAAAACGAGG...........................................................1911.001.00--------------------------------------------------1.00-------------------------------
...................................................................................................................................................................................................AGAAGGCCAAAGTACTCACCTCC................................2311.001.00-------------1.00--------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACAATCAA....2311.001.00--------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................................CCAAGAGATGATGACAAAGTAG............2211.001.00--------------------------------------------------------1.00-------------------------
....................................................................................................................................................................................................................ACCTCCAAGAGATGATGACAAAGTA.............2511.001.00---1.00------------------------------------------------------------------------------
...........................................................................................................................................................................AAACGACTGCCAAAACGAGGGCCAAGAAGG.................................................3011.001.00-----------------------------------------------------------------------1.00----------
......................................................................................................................................................................................................................CTCCAAGAGATGATGACAAAATA.............231.000.001.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCTCCAAGAGATGATGAC...................1811.001.00-------------------------------------1.00--------------------------------------------
.......................................................................................................................................................................................................................TCCAAGAGATGATGACAAAGTAA............2311.001.00----1.00-----------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGA...........1811.001.00---------------------------1.00------------------------------------------------------
..............................CGGCCTGACAGTATTTTA..........................................................................................................................................................................................................1811.001.00--------------------1.00-------------------------------------------------------------
.........................................................................................................................................................................GAAAACGACTGCCAAAACGAGG...........................................................2211.001.00----------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGACAATCA.....2211.001.00----------------------------------------------------1.00-----------------------------
.......................................................................................................................................................TAAGTGATGTTCTAAAGA.................................................................................1811.001.00----------------1.00-----------------------------------------------------------------
..............................................................................................................................................................................................................................GATGATGACAAAGTAGACAATCAA....2411.001.00----------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................CAAAGTACTCACCTCTTG..............................181.000.00---------------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGACAA........2411.001.001.00---------------------------------------------------------------------------------
..........................................................................................................................................................................AAAACGACTGCCAAAACGAGAGC.........................................................231.000.00--------------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................AAGAAGGCCAAAGTACTCACCT..................................2211.001.001.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AAGAGATGATGACAAAGTAGACAATCAAG...2911.001.00---------------------------------------------------------1.00------------------------
.............................................................................................................................................................................................................................AGATGATGACAAAGTAGACTT........2111.001.00----1.00-----------------------------------------------------------------------------
..........................................................................................................................................................................AAAACGACTGCCAAAACGAGGGA.........................................................231.000.00----------------------------------------1.00-----------------------------------------
....................................................................................................................................................................AAAGAGAAAACGACTGCCA...................................................................1911.001.001.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GATGACAAAGTAGACAATC......1911.001.00----------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................CCAAGAGATGATGACAAAGTAGACA.........2511.001.00--------------------1.00-------------------------------------------------------------
..............................................................................................................................................................TGTTCTAAAGAGAAAACGACTGCCAAAACG..............................................................3011.001.00-------------------------------1.00--------------------------------------------------
...............................................................................................................................................................GTTCTAAAGAGAAAACGACT.......................................................................2011.001.00----------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................CTCCAAGAGATGATGACAAAGT..............2211.001.001.00---------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATGATGACAAAGTAGAC..........1711.001.00----------------------1.00-----------------------------------------------------------
.........................................................................................................................................................AGTGATGTTCTAAAGAGAAA.............................................................................2011.001.00-------------------------1.00--------------------------------------------------------
................................................................................................................................................................................................................................TGATGACAAAGTAGACAA........1811.001.00----------------------------------1.00-----------------------------------------------
.................................................................................................................................................GTCGATTAAGTGATG..........................................................................................1520.500.50----------0.50-----------------------------------------------------------------------
.............................................................................................................................................................ATGTTCTAAAGAGAAAAC...........................................................................1820.500.50---------------------------------0.50------------------------------------------------
......................................................................................................................................................................AGAGAAAACGACTGC.....................................................................1520.500.50----------------------------------0.50-----------------------------------------------
..........................................................................................................................................................GTGATGTTCTAAAGAG................................................................................1640.250.25-----------------------------------0.25----------------------------------------------
.................................................................................................................................................................................................................................GATGACAAAGTAGAC..........1550.200.20---------------------------------------------------------------------------------0.20
...............................................................................................................................................................................................................................ATGATGACAAAGTAGA...........1670.140.14--------------0.14-------------------------------------------------------------------

Antisense strand
GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCTGACAGTATTTTATTACTCCCTGTTTCTGCCATTTTAGTTTGCTTTTTCAGTGAGTGAAGATATAAAACAGTGGTAATTGCTAAACTTATCTCATATTTTCCCATGGACAGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACAATCAAGGTA
.........................................................................................................................................................(((....((((....))))....)))...........((((.....))))...............................................
....................................................................................................................................................149......................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR189784SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037935(GSM510473)
293cand3. (cell line)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		GSM532880(GSM532880)
G659T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033724(GSM497069)
L428 cell line (L428). (B cell)		SRR189782SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)		TAX577740(Rovira)
total RNA. (breast)		SRR189785SRR038855(GSM458538)
D10. (cell line)		SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		TAX577739(Rovira)
total RNA. (breast)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR038854(GSM458537)
MM653. (cell line)		SRR038861(GSM458544)
MM466. (cell line)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR038852(GSM458535)
QF1160MB. (cell line)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
............GGCGTGAGCCACCGCGCCCGGCCTGT.................................................................................................................................................................................................................... 262.000.00-----2.00----------------------------------------------------------------------------
.........................................................................................................GTGGTAATTGCTAAAATTG.............................................................................................................................. 192.000.00-----------------------2.00----------------------------------------------------------
...............GTGAGCCACCGCGCCCGGCCCAAA................................................................................................................................................................................................................... 241.000.00------------------------------------------1.00---------------------------------------
...........AGGCGTGAGCCACCGCGCCCGGCCTCC.................................................................................................................................................................................................................... 271.000.00-----1.00----------------------------------------------------------------------------
..............CGTGAGCCACCGCGCCCGGCCTGTG................................................................................................................................................................................................................... 251.000.00-----1.00----------------------------------------------------------------------------
....................CCACCGCGCCCGGCCTGAGCA................................................................................................................................................................................................................. 211.000.00-----------------------------1.00----------------------------------------------------
..............CGTGAGCCACCGCGCCCGGCCTGACAGTCG.............................................................................................................................................................................................................. 301.000.00-----------------------------1.00----------------------------------------------------
...................................................................................CAGTGAGTGAAGATACATA.................................................................................................................................................... 191.000.00------------------------------------------------------1.00---------------------------
...........AGGCGTGAGCCACCGCGCCCGGCAA...................................................................................................................................................................................................................... 251.000.00-------1.00--------------------------------------------------------------------------
..........CAGGCGTGAGCCACCGCGACA........................................................................................................................................................................................................................... 211.000.00------------------------------------------------------------------------------1.00---
..............CGTGAGCCACCGCGCCCGGCCTAA.................................................................................................................................................................................................................... 241.000.00----------------------------------------------------------------------1.00-----------
.......................................................CTGTTTCTGCCATTTTAGTTTA............................................................................................................................................................................. 221.000.00---1.00------------------------------------------------------------------------------
........TACAGGCGTGAGCCACCGCGCCCGGCCTCCC................................................................................................................................................................................................................... 311.000.00-----1.00----------------------------------------------------------------------------