ID: uc010zcz.1_intron_20_0_chr2_166908499_r.3p
GENE: (5)
chr2:166908449-166908698-


(2)
B-CELL
(1)
BREAST
(9)
CELL-LINE
(2)
FIBROBLAST
(8)
HEART
(1)
KIDNEY
(9)
OTHER
(29)
SKIN

Sense strand
TTCATTTCATTGTTTAAATCATTACATTTCTGGAGTTTATCTTCATAAGTTCTTCCCCTTCAATGAAGTGTTGCTTCTCCACTAGCGTTGCAAACATTCTTGGATTTATGAATGAAATCTATGTTTTCAAGAAAATTGTGTGAAGCTTTTATTATTTCACACGTGTTAAGTCTTCATAGTAATAGACTTCTTTCTTTCAGGCCTGAAAACCATTGTGGGAGCCCTGATCCAGTCTGTGAAGAAGCTCTCA
................................................................................................((((((((..(((((......)).)))..))))))))...(((((((((.........))))))))).......................................................................................
..........................................................................................91..........................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189785SRR343335SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR343334SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR343337SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
...............................................................................................ATTCTTGGATTTATGAA..........................................................................................................................................17223.0023.001.000.502.500.500.502.500.500.50-2.000.50-2.00--1.500.50-0.501.001.00-----1.00-0.500.50---0.500.500.500.500.500.500.50---------------------
...............................................................................................ATTCTTGGATTTATGA...........................................................................................................................................16321.0021.004.00-3.000.671.330.331.671.670.33-1.00------0.330.33----1.00---0.67--0.330.330.33-------0.330.33-0.330.330.330.330.330.330.330.330.33---------
................................................................................................TTCTTGGATTTATGAA..........................................................................................................................................1684.004.000.88-1.000.250.38-0.120.25--0.12-------0.12----------0.12-0.120.25---------0.120.12---------------0.12-
...................................................................................................TTGGATTTATGAATGACGA....................................................................................................................................193.000.00-1.00-2.00---------------------------------------------------------
...............................................................................................ATTCTTGGATTTATG............................................................................................................................................1572.432.430.86--0.140.14-0.14-----------0.14-----------0.290.14---------0.14-----------0.14-0.140.14----
...............................................................................................ATTCTTGGATTTATGAAGAC.......................................................................................................................................2022.0023.00-----------2.00-------------------------------------------------
................................................................................................................................................GCTTTTATTATTTCATCGC.......................................................................................191.000.00-----------------1.00-------------------------------------------
.............................................................................................ACATTCTTGGATTTATGAAAGAC......................................................................................................................................2311.001.00-1.00-----------------------------------------------------------
.................................................................................................TCTTGGATTTATGAATGATGAA...................................................................................................................................221.000.00--------------1.00----------------------------------------------
....................................................................................................TGGATTTATGAATGACG.....................................................................................................................................171.000.001.00------------------------------------------------------------
...............................................................................................ATTCTTGGATTTATGAATGACGA....................................................................................................................................231.000.00--------1.00----------------------------------------------------
.................................................................................................TCTTGGATTTATGAATGACG.....................................................................................................................................201.000.00----1.00--------------------------------------------------------
...............................................................................................ATTCTTGGATTTATGAATGACG.....................................................................................................................................221.000.00--------------1.00----------------------------------------------
..............................................................................................CATTCTTGGATTTATGAAA.........................................................................................................................................191.000.001.00------------------------------------------------------------
.............................................................................................ACATTCTTGGATTTATGAAAG........................................................................................................................................2111.001.00-1.00-----------------------------------------------------------
..CATTTCATTGTTTAAATGAGA...................................................................................................................................................................................................................................211.000.00----------------------1.00--------------------------------------
.................................................................................................TCTTGGATTTATGAAGACG......................................................................................................................................191.000.00---1.00---------------------------------------------------------
.............................................................................................ACATTCTTGGATTTATGAAAGA.......................................................................................................................................2211.001.00-1.00-----------------------------------------------------------
................................................................................................TTCTTGGATTTATGAATGACGA....................................................................................................................................221.000.00--------1.00----------------------------------------------------
...................................................................................................TTGGATTTATGAATGACG.....................................................................................................................................181.000.00-1.00-----------------------------------------------------------
.............................................................................................ACATTCTTGGATTTATGATTT........................................................................................................................................211.000.00-------------1.00-----------------------------------------------
...............................................................................................ATTCTTGGATTTATGAATGACGAA...................................................................................................................................241.000.00-1.00-----------------------------------------------------------
.............................................................................................ACATTCTTGGATTTATTG...........................................................................................................................................181.000.00----------------1.00--------------------------------------------
........................................................................................TGCAAACATTCTTGGCTGG...............................................................................................................................................191.000.00-------------------------1.00-----------------------------------
.............................................................................................ACATTCTTGGATTTATGAAAGAA......................................................................................................................................2311.001.00-------------1.00-----------------------------------------------
.............................................................................................ACATTCTTGGATTTATGAACGA.......................................................................................................................................2211.001.00-1.00-----------------------------------------------------------
.............................................................................................ACATTCTTGGATTTATGAA..........................................................................................................................................1911.001.00------------------------1.00------------------------------------
..................................................................................................CTTGGATTTATGAATGA.......................................................................................................................................1720.500.50----------0.50--------------------------------------------------
..............................................................................................................................................................................................................................CCTGATCCAGTCTGTGAA..........1830.330.33------------------------------------------0.33------------------
...............................................................................................ATTCTTGGATTTATGATAG........................................................................................................................................1930.3321.00-0.33-----------------------------------------------------------
...............................................................................................ATTCTTGGATTTATGGATC........................................................................................................................................1970.292.43----------------------------------------------------0.29--------
...............................................................................................ATTCTTGGATTTATGGA..........................................................................................................................................1770.292.43---------------------------------------------------------0.140.14--
...............................................................................................ATTCTTGGATTTATGGAAG........................................................................................................................................1970.292.43---0.14------------------------------------0.14--------------------
...............................................................................................ATTCTTGGATTTATGG...........................................................................................................................................1670.292.43---------0.14------------------0.14--------------------------------
...............................................................................................ATTCTTGGATTTATGTAAG........................................................................................................................................1970.142.43------0.14------------------------------------------------------
...............................................................................................ATTCTTGGATTTATGGAA.........................................................................................................................................1870.142.43------------------------------------------------------0.14------
................................................................................................TTCTTGGATTTATGAAGAC.......................................................................................................................................1980.124.00--0.12----------------------------------------------------------
................................................................................................TTCTTGGATTTATGAAGACG......................................................................................................................................2080.124.00----0.12--------------------------------------------------------
................................................................................................TTCTTGGATTTATGAAGG........................................................................................................................................1880.124.00------------------------------------------------------------0.12

Antisense strand
TTCATTTCATTGTTTAAATCATTACATTTCTGGAGTTTATCTTCATAAGTTCTTCCCCTTCAATGAAGTGTTGCTTCTCCACTAGCGTTGCAAACATTCTTGGATTTATGAATGAAATCTATGTTTTCAAGAAAATTGTGTGAAGCTTTTATTATTTCACACGTGTTAAGTCTTCATAGTAATAGACTTCTTTCTTTCAGGCCTGAAAACCATTGTGGGAGCCCTGATCCAGTCTGTGAAGAAGCTCTCA
................................................................................................((((((((..(((((......)).)))..))))))))...(((((((((.........))))))))).......................................................................................
..........................................................................................91..........................................................................167.................................................................................
SizePerfect hitTotal NormPerfect NormSRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189784SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR189785SRR343335SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR189783SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR343334SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR343337SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363675(GSM830252)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR189786SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
................................................................................................................TGAAATCTATGTTTTCAAAT...................................................................................................................... 201.000.00---------------------1.00---------------------------------------