ID: uc010yvj.1_intron_24_0_chr2_99193607_f.3p
GENE: INPP4A(25)
chr2:99197839-99198088+


(2)
AGO2.ip 		(3)
BRAIN 		(1)
BREAST 		(14)
CELL-LINE 		(2)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
LIVER 		(1)
OTHER 		(21)
SKIN

Sense strand
CTTCCTCTCATACCCGTTTCTGCATTTCATCTTTTCTTTCTATTGTGACTTCATTTCATTTTTTTTTAACCTTATCTTTTGTTTCTCTTGTTTATCCCATCCTTTTTGATAAAATCCATCGCATGTGTCTTCTTTTTTTCTTTATTTTCTTTCCTTTCCTTTTTCCTTTTTCTTTCTCCCAAACTTTTTCCTTTTCACAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGC
..........................................................................................((((((...........)))))).........................................................................................................................................
..........................................................................................91............................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR040042(GSM532927)
G428N. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
...............................................................................................CCCATCCTTTTTGATAAAAT.......................................................................................................................................20112.0012.00--------2.002.00-1.00---1.001.001.00---1.001.00----1.00-----1.00-----------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTCTTG.........................................................................................................................................................................345.000.00-1.004.00------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTTG...........................................................................................................................................................................3214.003.00-1.00-2.001.00----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTA................................................................................................................................................................................2713.003.002.001.00-------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTT............................................................................................................................................................................3113.003.003.00--------------------------------------------
...............................................................................................................................................ATTTTCTTTCCTTTCCTTCCAG.....................................................................................223.000.00-2.001.00------------------------------------------
.................................................................................................CATCCTTTTTGATAAAAT.......................................................................................................................................1822.502.50--------------------------1.00-----------1.00--0.50---
.................................................................................................................................................TTTCTTTCCTTTCCTTTTTCTTG..................................................................................232.000.00---1.001.00----------------------------------------
.......................................................................................................................................................................................................GCATTGGAACACGGGAGGTAGT.............................2212.002.00-------------------------1.00---1.00---------------
........................................................................................................................................................................................................CATTGGAACACGGGAGGTAGT.............................2112.002.00-------2.00-------------------------------------
...............................................................................................................................................................................................................................CCCAGAAGAACTTGAGCGGC.......2012.002.00------------------1.00---------1.00----------------
.....................................TTCTATTGTGACTTCATAGA.................................................................................................................................................................................................202.000.00-----------------------1.00----------------1.00----
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTTTT..........................................................................................................................................................................3312.002.001.00--1.00-----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTTTG..........................................................................................................................................................................331.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................................CAGAAGAACTTGAGCGGCCT.....2011.001.00----------------------------------1.00----------
...............................................................TTTTAACCTTATCTTTGACC.......................................................................................................................................................................201.000.001.00--------------------------------------------
.........................................................................................................................................................CTTTCCTTTTTCCTTTTAG..............................................................................191.000.00--1.00------------------------------------------
.......TCATACCCGTTTCTGCATTTCA.............................................................................................................................................................................................................................2211.001.00------1.00--------------------------------------
.................................................................TTAACCTTATCTTTTTTG.......................................................................................................................................................................181.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................................CAGAAGAACTTGAGCGGCCTGGTGC2511.001.00--------------1.00------------------------------
.............................................................................................................................................................................................................................CACCCAGAAGAACTTGAGC..........1911.001.00------1.00--------------------------------------
............................................................................................TATCCCATCCTTTTTGATAAAAT.......................................................................................................................................2311.001.00------------------------------------1.00--------
...............................................................................................................................................ATTTTCTTTCCTTTCCTCCAG......................................................................................211.000.001.00--------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTC............................................................................................................................................................................311.000.001.00--------------------------------------------
.............................................................................................................................................................................TTCTCCCAAACTTTTTTG...........................................................181.000.00--1.00------------------------------------------
.................................................................................................................................................................................................................ACGGGAGGTAGTCACCCAGAAGAACTT..............2711.001.00------1.00--------------------------------------
.................................................................................................................................................................................................................................CAGAAGAACTTGAGCGGCC......1911.001.00------1.00--------------------------------------
..................................................TCATTTCATTTTTTTTTAACCTTATCTTTTG.........................................................................................................................................................................3111.001.00--1.00------------------------------------------
..........................................................................................................................................................TTTCCTTTTTCCTTTTTCTTTCTCCCAAAC..................................................................3011.001.00------1.00--------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTCTCA.........................................................................................................................................................................341.000.00-1.00-------------------------------------------
....................................................................................................................................TTTTTTTCTTTATTTTCTTTCATC..............................................................................................241.000.001.00--------------------------------------------
..............................................................................................................................................................CTTTTTCCTTTTTCTTTATG........................................................................201.000.00-1.00-------------------------------------------
.................................................................................................................................................................................................................ACGGGAGGTAGTCACCCAGAAGAACTTGAGC..........3111.001.00-------------------------------1.00-------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTCG...........................................................................................................................................................................321.000.00-1.00-------------------------------------------
...................................................................................................................................................................................CAAACTTTTTCCTTTTCCCC...................................................201.000.00------------1.00--------------------------------
................................................CTTCATTTCATTTTTTTTTAACCTTATCTTTTT.........................................................................................................................................................................331.000.00----1.00----------------------------------------
..................................................TCATTTCATTTTTTTTGTG.....................................................................................................................................................................................191.000.00-1.00-------------------------------------------
..........................................TTGTGACTTCATTTCATTTTTTTTT.......................................................................................................................................................................................2511.001.00-----1.00---------------------------------------
...................................................................................................................................................................................CAAACTTTTTCCTTTCCCT....................................................191.000.00------------1.00--------------------------------
............................................................................................................................................TTTATTTTCTTTCCTTTTCAG.........................................................................................211.000.00--1.00------------------------------------------
......................................................................................................................................TTTTTCTTTATTTTCTTTCCTTTCCC..........................................................................................261.000.00----------1.00----------------------------------
........................................................................................................................................................................................................................GTAGTCACCCAGAAGAACTTGAG...........2311.001.00-----------1.00---------------------------------
.............................................................................................................................TGTCTTCTTTTTTTCGAG...........................................................................................................181.000.00-----1.00---------------------------------------
...............................................ACTTCATTTCATTTTTTTTTTACC...................................................................................................................................................................................241.000.001.00--------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATTTTG...........................................................................................................................................................................321.000.00----1.00----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTGTTG.........................................................................................................................................................................341.000.00---1.00-----------------------------------------
................................................CTTCATTTCATTTTTTTTTAACCTTATCTTG...........................................................................................................................................................................311.000.00----1.00----------------------------------------
....................................................................................................................................TTTTTTTCTTTATTTTCTTCCA................................................................................................221.000.001.00--------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTTG...............................................................................................................................................................................281.000.00--1.00------------------------------------------
..........................................................................................................................................................................................................TTGGAACACGGGAGGTAGTCACC.........................2311.001.00------1.00--------------------------------------
.....................................................................................................................................TTTTTTCTTTATTTTCTTTCCTTTCTCT.........................................................................................281.000.00-----1.00---------------------------------------
........................................................................................................................................................................................................CATTGGAACACGGGAGGTCGT.............................211.000.00-------1.00-------------------------------------
...................................................CATTTCATTTTTTTTTAACCTTATCTTTTG.........................................................................................................................................................................3011.001.00---1.00-----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCATA................................................................................................................................................................................271.000.001.00--------------------------------------------
...................................................................................................................................................TCTTTCCTTTCCTTTTTCAATG.................................................................................221.000.00---1.00-----------------------------------------
................................................................................................CCATCCTTTTTGATAAAAT.......................................................................................................................................1911.001.00------------------------------1.00--------------
........................................................................................................................................................................................................CATTGGAACACGGGAGGTAG..............................2011.001.00-----------------------------------1.00---------
............................................................................................................................................................TCCTTTTTCCTTTTTCGAG...........................................................................191.000.00-----1.00---------------------------------------
...........................................................................................................................................................TTCCTTTTTCCTTTTTCTTTCTAG.......................................................................241.000.00--1.00------------------------------------------
...........................................................................................................................................................TTCCTTTTTCCTTTTTCTGGC..........................................................................211.000.00-----1.00---------------------------------------
..................................TCTTTCTATTGTGACGATC.....................................................................................................................................................................................................191.000.00---1.00-----------------------------------------
...............................................................................................................................................ATTTTCTTTCCTTTCCTTTTG......................................................................................211.000.00--1.00------------------------------------------
....................................................ATTTCATTTTTTTTTAACCTTATCTT............................................................................................................................................................................2611.001.001.00--------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTAA................................................................................................................................................................................271.000.00--1.00------------------------------------------
...................................................................................................................................................TCTTTCCTTTCCTTTTTCCCCC.................................................................................221.000.00--1.00------------------------------------------
.......................................................................................................................................TTTTCTTTATTTTCTTTACC...............................................................................................201.000.00-----1.00---------------------------------------
....................................................................................................................................................CTTTCCTTTCCTTTTTCCAG..................................................................................201.000.00-1.00-------------------------------------------
....................................................................ACCTTATCTTTTGTTTCTCTTGTTTATCCC........................................................................................................................................................3011.001.00-----1.00---------------------------------------
..........................................................................................................................................................TTTCCTTTTTCCTTTTGCG.............................................................................191.000.001.00--------------------------------------------
.........................................................ATTTTTTTTTAACCTTATCTTG...........................................................................................................................................................................221.000.00-1.00-------------------------------------------
....................................................................................................................................................CTTTCCTTTCCTTTTTCCTCCAG...............................................................................231.000.001.00--------------------------------------------
...............GTTTCTGCATTTCATCTTTTCTTTCTATTG.............................................................................................................................................................................................................3011.001.001.00--------------------------------------------
.................................................TTCATTTCATTTTTTTTTAATTAT.................................................................................................................................................................................241.000.00-1.00-------------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCTTTTA.........................................................................................................................................................................3411.002.00---1.00-----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTTTAC...................................................................................................................................................................................241.000.00----------1.00----------------------------------
................................................CTTCATTTCATTTTTTTTTAACCTTATCTTT...........................................................................................................................................................................3111.001.00----1.00----------------------------------------
...................................................................................................................................CTTTTTTTCTTTATTTTCTTTTCAT..............................................................................................251.000.00-1.00-------------------------------------------
...................................................CATTTCATTTTTTTTTAACCTTATCTTTTT.........................................................................................................................................................................301.000.00----1.00----------------------------------------
...............................................ACTTCATTTCATTTTTTTTTAACCTTATCCTTT..........................................................................................................................................................................331.000.00-1.00-------------------------------------------
...............................................ACTTCATTTCATTTTTTTTAAT.....................................................................................................................................................................................221.000.001.00--------------------------------------------
..................................................................................................ATCCTTTTTGATAAAAT.......................................................................................................................................1740.750.75--------0.25----------------------------------0.250.25

Antisense strand
CTTCCTCTCATACCCGTTTCTGCATTTCATCTTTTCTTTCTATTGTGACTTCATTTCATTTTTTTTTAACCTTATCTTTTGTTTCTCTTGTTTATCCCATCCTTTTTGATAAAATCCATCGCATGTGTCTTCTTTTTTTCTTTATTTTCTTTCCTTTCCTTTTTCCTTTTTCTTTCTCCCAAACTTTTTCCTTTTCACAGCATTGGAACACGGGAGGTAGTCACCCAGAAGAACTTGAGCGGCCTGGTGC
..........................................................................................((((((...........)))))).........................................................................................................................................
..........................................................................................91............................................................................169...............................................................................
SizePerfect hitTotal NormPerfect NormSRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343335SRR040042(GSM532927)
G428N. (cervix)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040035(GSM532920)
G001T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................CCTTTTTCTTTCTCCCGTTT.................................................................. 201.000.00--------------------1.00------------------------
...................................................................................................................................................TCTTTCCTTTCCTTTTCGA.................................................................................... 191.000.00-------------------1.00-------------------------
...................................................AAAAAAAATGAAATG........................................................................................................................................................................................ 1501.001.00-------------------------------------1.00-------
...................................................................AACCTTATCTTTTGTGAA..................................................................................................................................................................... 181.000.00-------------1.00-------------------------------
........................................................................................................................................................................TTTCTTTCTCCCAAACTTGA.............................................................. 201.000.00---------------------------------------1.00-----
....................................................................................................................................................................CCTTTTTCTTTCTCCCCTT................................................................... 191.000.00------------------------1.00--------------------
................................................................................................................................................TTTTCTTTCCTTTCCTTTTGGCG................................................................................... 231.000.00--------------------------------1.00------------
.........................................................................................................................................................................................................CCTCCCGTGTTCCAAT................................. 1630.330.33------------------------------------------0.33--