ID: uc010yvc.1_intron_29_0_chr2_98169835_r.3p
GENE: ANKRD36B(14)
chr2:98169785-98170034-


(1)
AGO2.ip
(15)
B-CELL
(1)
BRAIN
(38)
BREAST
(11)
CELL-LINE
(9)
CERVIX
(2)
FIBROBLAST
(1)
HEART
(2)
LIVER
(1)
OTHER
(1)
OVARY
(7)
SKIN
(2)
UTERUS
(1)
XRN.ip

Sense strand
AGGAATGTATCGTGACACATCTATTTCTGTTTTCTTTAGTATATTTGTGTCATGCTCCTGGCTTAAGACATAAAGTAGAAAACATCAAAGCCTACACTAATACAGGCAGGCGGATACAGCTTGATGCTAACACCGCATGAATGTATGGAAAATGTATCATATTTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAACAACAAGCCTTGAAGGTAATTGAACTCTCATTTATG
..................................................................................(((((..((((..........)))).(((.......))))))))............................................................................................................................
...............................................................64............................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR040018(GSM532903)
G701N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM379265(GSM379265)
Small RNA from endometrioid ovarian cancer tissue. (ovary)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
....................................................................CATAAAGTAGAAAACACTA...................................................................................................................................................................19339.000.00267.002.005.003.004.001.003.002.003.004.002.001.002.00-3.001.003.002.001.001.00-2.002.001.00---1.00-1.001.001.00-1.00-1.00------1.00--1.00-------1.001.001.001.001.00----1.00-1.001.00-1.00-----1.00-1.001.001.00-----1.00-1.001.00-------
....................................................................CATAAAGTAGAAAACACTAC..................................................................................................................................................................20139.000.0081.0015.002.001.00-1.001.001.00--1.003.002.003.00-2.00-1.002.001.003.00--1.00-----1.00-1.00--1.00-----1.001.00-1.001.00--1.001.00-1.00-1.00-----1.00----1.00-----1.001.00----------1.001.00-1.00---------
....................................................................CATAAAGTAGAAAACACTAA..................................................................................................................................................................2035.000.0015.004.002.004.001.001.00-------------1.00------2.00---1.00---------------1.00-------------1.00-----------------1.00-1.00-------------
....................................................................CATAAAGTAGAAAACACTAT..................................................................................................................................................................2011.000.009.00----1.00-1.00--------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACAATA...................................................................................................................................................................194.000.001.00---2.00-1.00---------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACTCC..................................................................................................................................................................203.000.003.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATTA...................................................................................................................................................................192.000.001.00------------------------------------------------------------1.00--------------------------------
....................................................................CATAAAGTAGAAAACACGA...................................................................................................................................................................192.000.00---------------------------1.00----------------------------------------------1.00-------------------
...............................................................................................................................................................................................................TCAGAAACAACAAGCCTTGAAG.....................2212.002.00----------------------------2.00-----------------------------------------------------------------
..................................................................GACATAAAGTAGAAAGCA......................................................................................................................................................................182.000.00--------------------------------------1.00---------------------------------1.00---------------------
....................................................................CATAAAGTAGAAAACACGAC..................................................................................................................................................................202.000.001.001.00--------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATTAC..................................................................................................................................................................202.000.002.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATT....................................................................................................................................................................182.000.002.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACTCT..................................................................................................................................................................202.000.00--1.00--1.00----------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATTACT.................................................................................................................................................................212.000.002.00---------------------------------------------------------------------------------------------
.......................................................................................................AGGCAGGCGGATACATCAA................................................................................................................................191.000.00-----------------------------------------------------------1.00----------------------------------
....................................................................CATAAAGTAGAAAACACTC...................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACCAA..................................................................................................................................................................201.000.00-----1.00----------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAAC.......................................................................................................................................................................1501.001.00-----------------------------------------------------------------------1.00----------------------
.....................................................................................................................................................................................................CAGTGTCTTCTCAGAACT...................................181.000.00-------------------------1.00--------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATTAT..................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATAAC..................................................................................................................................................................201.000.00---1.00------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACAATAC..................................................................................................................................................................201.000.00------------------------------------------------------------------1.00---------------------------
....................................................................CATAAAGTAGAAAACACCAC..................................................................................................................................................................201.000.00-1.00--------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACAATC...................................................................................................................................................................191.000.00--------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGTGTCTTCTCAGACCTT..................................191.000.00-------------------------1.00--------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACCCTC...................................................................................................................................................................1901.001.00--1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................TCTCAGAAACAACAAGCCTTGAA......................2311.001.00-------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................................................................TCTTCTCAGAAACAACAAGCCTTGAA......................2611.001.00---------------------------------------1.00------------------------------------------------------
...................................................................ACATAAAGTAGAAAACACTA...................................................................................................................................................................201.000.00-------1.00--------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATTACA.................................................................................................................................................................211.000.00----------1.00-----------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACTACT...................................................................................................................................................................1901.001.00---------------------------------------------------1.00------------------------------------------
....................................................................CATAAAGTAGAAAACACG....................................................................................................................................................................181.000.001.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACCAT..................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACC....................................................................................................................................................................181.000.00--------1.00-------------------------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACAATAA..................................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------
..................................................................GACATAAAGTAGAAAGCAC.....................................................................................................................................................................191.000.00-------------------------------------------------------------------------------1.00--------------
...........................................................................................................................................................................................TTTTGCTTTTCAGTGTGTAT...........................................201.000.00------------------------1.00---------------------------------------------------------------------
....................................................................CATAAAGTAGAAAACATCACTA................................................................................................................................................................221.000.00-------------------------------------------------1.00--------------------------------------------
....................................................................CATAAAGTAGAAAACAAT....................................................................................................................................................................181.000.00--------------------------------1.00-------------------------------------------------------------
....................................................................CATAAAGTAGAAAACACAC...................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------
......................................................................................................CAGGCAGGCGGATACAGCTT................................................................................................................................2020.500.50------------------------------------------------------------------------------------------0.50---
......................ATTTCTGTTTTCTTTAGTATA...............................................................................................................................................................................................................2120.500.50-----------------------------------------------------------------------------------------0.50----
....................................................................................................................................................................................................................................GGTAATTGAACTCTCA......1620.500.50----------------------------------------------------------------------------------------0.50-----
....................................................................................................................................................................................................................AACAACAAGCCTTGAAG.....................1720.500.50-------------------------------------------------------------------------------------------0.50--
..............................................................TTAAGACATAAAGTAGAAAACATCAAAGCCTA............................................................................................................................................................3230.330.33--------------------------------------------------------------------------------------------0.33-
...........................................................................................CTACACTAATACAGGCAG.............................................................................................................................................1840.250.25---------------------------------------------------------------------------------------------0.25

Antisense strand
AGGAATGTATCGTGACACATCTATTTCTGTTTTCTTTAGTATATTTGTGTCATGCTCCTGGCTTAAGACATAAAGTAGAAAACATCAAAGCCTACACTAATACAGGCAGGCGGATACAGCTTGATGCTAACACCGCATGAATGTATGGAAAATGTATCATATTTACATATGAGTGATTATGTATCCCTTTTGCTTTTCAGTGTCTTCTCAGAAACAACAAGCCTTGAAGGTAATTGAACTCTCATTTATG
..................................................................................(((((..((((..........)))).(((.......))))))))............................................................................................................................
...............................................................64............................................................126..........................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR033724(GSM497069)
L428 cell line (L428). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191566(GSM715676)
94genomic small RNA (size selected RNA from t. (breast)
SRR191570(GSM715680)
56genomic small RNA (size selected RNA from t. (breast)
TAX577738(Rovira)
total RNA. (breast)
SRR040015(GSM532900)
G623T. (cervix)
SRR040018(GSM532903)
G701N. (cervix)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR040025(GSM532910)
G613T. (cervix)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR191612(GSM715722)
65genomic small RNA (size selected RNA from t. (breast)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR189782SRR037937(GSM510475)
293cand2. (cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
TAX577579(Rovira)
total RNA. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR191409(GSM715519)
19genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR040010(GSM532895)
G529N. (cervix)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040029(GSM532914)
G026T. (cervix)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR189787SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR191459(GSM715569)
32genomic small RNA (size selected RNA from t. (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR191442(GSM715552)
107genomic small RNA (size selected RNA from . (breast)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR191578(GSM715688)
100genomic small RNA (size selected RNA from . (breast)
SRR040007(GSM532892)
G601T. (cervix)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM532884(GSM532884)
G871T. (cervix)
SRR191597(GSM715707)
75genomic small RNA (size selected RNA from t. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM379265(GSM379265)
Small RNA from endometrioid ovarian cancer tissue. (ovary)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
TAX577745(Rovira)
total RNA. (breast)
SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR191394(GSM715504)
23genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................................................................................................AATGTATGGAAAATGTATCTG.......................................................................................... 211.000.00---------------------------------------------------------------------------------------1.00------
......................................................................................................................................................AATGTATCATATTTACACTCA............................................................................... 211.000.00------------------------------------1.00---------------------------------------------------------
........................................ATATTTGTGTCATGCTCTCAC............................................................................................................................................................................................. 211.000.00------------------------1.00---------------------------------------------------------------------
.................................................................................................................................................................................................................AGAAACAACAAGCCTAAC....................... 181.000.00--------------------------------------------------------------------1.00-------------------------