ID: uc010xpz.1_intron_1_0_chr19_18047389_f.3p
GENE: (2)
chr19:18053265-18053514+


(3)
AGO2.ip
(3)
B-CELL
(2)
BRAIN
(14)
BREAST
(20)
CELL-LINE
(11)
CERVIX
(8)
HEART
(3)
HELA
(9)
LIVER
(3)
OTHER
(75)
SKIN
(1)
TESTES
(3)
UTERUS
(1)
XRN.ip

Sense strand
CCGCCCTGTCCAAGGTTCCCCTGTTGGCCTCACATCCCCCGCCCAGGGCAGCACCGGGACCTATCTTGTTCCTGGTATGTCCCCTGCACCCAGCACAGAGCCTAAATCCTCGTTGGCTGAGATGAAAACTCGAACCCCAGGCTAGTGGGTGGCGCGGGGGTGTGGGGTCTTCTGCCTGACCATGCACGCCGCCCCCGCAGGAGGAGAAGGAGAAGCGGCGCCTCGACCAGCTGGAACGTAAGAAGGAGAC
.........................................................................................................................................................(((((((((((.((((........)))).....))).))))))))....................................................
....................................................................................................................................................149.......................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553576(SRX182782)
source: Testis. (testes)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040040(GSM532925)
G612N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532874(GSM532874)
G699T. (cervix)
SRR191545(GSM715655)
139genomic small RNA (size selected RNA from . (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR189784
.........................................................................................................................................................GCGGGGGTGTGGGGTC.................................................................................16285.0085.0013.5011.506.006.003.003.501.500.50-1.003.001.501.00-1.001.002.002.00-3.00-0.501.50-2.000.501.50-0.50-1.50----1.001.50-1.00-0.50--0.500.500.50-----1.000.500.500.500.50--0.50----1.00--0.50-----------------1.00------------0.50----0.50-0.50---0.50---------0.50-0.50-------0.50--0.50-0.50---------------------
..........................................................................................................................................................CGGGGGTGTGGGGTC.................................................................................15547.6047.608.204.402.401.400.202.400.600.600.400.200.600.401.00-0.200.60-1.000.400.40-0.401.00-0.200.400.40-0.600.40-----0.200.40-0.600.20-0.80-1.00---0.80--0.400.400.200.400.800.800.800.80-0.200.601.20-0.200.200.600.200.40---------------------------0.400.200.20-0.400.60-0.200.200.200.20--0.20-0.400.40-0.400.400.60-------------------0.20-----0.200.200.200.20-----0.20-0.200.20-
.........................................................................................................................................................GCGGGGGTGTGGGGTCCT...............................................................................18218.5085.00-0.500.50-1.500.50-2.00--0.501.50------1.00----0.50-----0.50---1.00------1.00-1.00------------------------0.50-1.00-----------------------1.00--0.50----0.50----0.500.50-----------0.50-0.50--0.50-----0.50------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCT...............................................................................17511.8047.60---0.200.200.401.802.400.20-0.20-0.20-0.20--0.200.60-------0.20--------0.20-----0.20-----0.20-0.40--------0.20-0.60------0.20----------------------------0.20-0.800.40-----------0.200.200.20-----------------------0.40-0.20------0.200.20-------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCTT..............................................................................1928.0085.001.50---1.50-0.50----1.000.50-----------------------------0.50----------0.50----------0.50----------------1.00-----------------------------------------0.50-------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCTT..............................................................................1856.8047.601.60--0.20--0.600.40--0.20---0.200.20-0.200.20-----0.20-0.20--0.200.60---------------------0.20-------------0.40---------------------------------0.20-----0.200.20--0.20------------------------0.20---------0.20---------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCTTC.............................................................................2025.5085.00-0.50--1.00----0.50---------------------0.50---0.50-0.50---------0.50----0.50------------------------------------------------------------------------0.50-0.50---------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCTTC.............................................................................1955.0047.60----0.20----0.200.400.200.20--0.20--0.20--------0.20---0.60-----0.40-------------------0.40----0.20----------------------------------0.20---0.20----------0.40-----------------------0.20---0.20-------0.20--0.20---
.......................................................................................................................................................GCGCGGGGGTGTGGGGT..................................................................................1713.003.00------1.00---------1.00-----------------------------------------------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TCGACCAGCTGGAACGTA..........1812.002.00--------------------------------------------------------------------------------1.00-----------1.00--------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTTTAA..............................................................................192.000.00---------------------------------------------1.00----------------------------------------1.00--------------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGTC.................................................................................1712.002.00--------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGT..................................................................................1612.002.00--1.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCTACCC............................................................................202.000.00---------------------------2.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCTTTCC............................................................................202.000.00--------------2.00--------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................GAAGGAGAAGCGGCGCCTCGACCAG....................2511.001.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GTGGCGCGGGGGTGTCATC...................................................................................191.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................AGCGGCGCCTCGACCAGCTGGAACGT...........2611.001.00--------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGTCCT...............................................................................1911.002.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGTTT................................................................................1811.002.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTTA................................................................................171.000.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCGCGGGGGTGTGGGGTC.................................................................................1811.001.00-----------------------------------------------------------------------------------1.00-----------------------------------------------------------------------
................................................................................................................................................................................................................................GACCAGCTGGAACGTAAGAAG.....2111.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGAGGAGAAGGAGAAGCGGCGCCTCG.........................2711.001.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AAGCGGCGCCTCGACCAGCTGGAACGCAAG........301.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CTGGAACGTAAGAAGGAGAC2011.001.00---------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
...........................................................................................................................................................GGGGGTGTGGGGTCTTTC.............................................................................181.000.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
...................................................................................................................................................GGTGGCGCGGGGGTGTGT.....................................................................................181.000.00----------------------------------------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCCTCGACCAGCTGGAACGT...........2011.001.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................CGACCAGCTGGAACGTAAGAAGGAGAC2711.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTTTTT..............................................................................191.000.00-----------------------------------------------------------------------1.00-----------------------------------------------------------------------------------
.................................................................................................................................................................................................................................ACCAGCTGGAACGTAAGAAGG....2111.001.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCTGG..............................................................................191.000.00------------------------------------------------------------------------1.00----------------------------------------------------------------------------------
.......................................................................................................................................................GCGCGGGGGTGTGGGG...................................................................................1611.001.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGAACCCCAGGCTAGTGGG.....................................................................................................1911.001.00-----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
.....................................................................................................................................................................................................................................GCTGGAACGTAAGAAGGAGAC2111.001.00-------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
................................................................................................................................................................................................................................GACCAGCTGGAACGTAAGAAGGA...2311.001.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................GCACGCCGCCCCCGCAGGAG...............................................2011.001.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCTTCC.............................................................................201.000.00------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGTCTTGCT............................................................................221.000.00----------------------------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GACCAGCTGGAACGTAAGAAGGAG..2411.001.00-------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTAAA...............................................................................181.000.00-----------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GAAGCGGCGCCTCGACCAGCT..................2111.001.00----------------------------------------------------------------------------------------1.00------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTTCT...............................................................................181.000.00--------------------------------------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................................................................CGCGGGGGTGTGGGGTCC................................................................................1811.002.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGAGGAGAAGGAGAAGCGGCGCCTCGA........................2711.001.00------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................GGGTGTGGGGTCTTCCCCC..........................................................................191.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................TCTGCCTGACCATGCACGCCGCCCCCGC....................................................2811.001.00---------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CGGCGCCTCGACCAGCTGGAACGTAAG........2711.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCTGTC.............................................................................201.000.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GAGAAGCGGCGCCTCTCT.......................181.000.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCTC..............................................................................1921.0085.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGAGGAGAAGGAGAAGCGGCGCCTCGACCAG....................3211.001.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCAATC.............................................................................1950.6047.60--------------------------------------------------------------------------------------------------------------------0.60--------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCA...............................................................................1820.5085.00----------------------------------------------------------0.50------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCA................................................................................1720.5085.00-0.50---------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GGCGCGGGGGTGTGGG....................................................................................1640.500.50------0.25-----------------------------------------------------------------------------------------------------------------------------------0.25----------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCTAA.............................................................................2020.5085.00--------------------------------------------------------------------------------------------------------------------------------------0.50--------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCTCT.............................................................................2020.5085.00--------------------------------------------------------0.50--------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCGCGGGGGTGTGGG....................................................................................1540.250.25------------0.25----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCTCC.............................................................................1950.2047.60-----------------------------------------------------------------------------------------------------------------------------------------------------0.20-----
..........................................................................................................................................................CGGGGGTGTGGGGTCG................................................................................1650.2047.60------------------------------------------------------------------------------------------------------------------0.20----------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCTTT.............................................................................1950.2047.60----------------------------------------------------------------------------------------------------------------------------------------0.20------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCCTC..............................................................................1850.2047.60---------------------------------------0.20-------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CGGGGGTGTGGGGTCGTC..............................................................................1850.2047.60---------------------------------------0.20-------------------------------------------------------------------------------------------------------------------

Antisense strand
CCGCCCTGTCCAAGGTTCCCCTGTTGGCCTCACATCCCCCGCCCAGGGCAGCACCGGGACCTATCTTGTTCCTGGTATGTCCCCTGCACCCAGCACAGAGCCTAAATCCTCGTTGGCTGAGATGAAAACTCGAACCCCAGGCTAGTGGGTGGCGCGGGGGTGTGGGGTCTTCTGCCTGACCATGCACGCCGCCCCCGCAGGAGGAGAAGGAGAAGCGGCGCCTCGACCAGCTGGAACGTAAGAAGGAGAC
.........................................................................................................................................................(((((((((((.((((........)))).....))).))))))))....................................................
....................................................................................................................................................149.......................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR553576(SRX182782)
source: Testis. (testes)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
TAX577740(Rovira)
total RNA. (breast)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040039(GSM532924)
G531T. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR040040(GSM532925)
G612N. (cervix)
SRR040030(GSM532915)
G013N. (cervix)
GSM532876(GSM532876)
G547T. (cervix)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR040009(GSM532894)
G727T. (cervix)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
TAX577739(Rovira)
total RNA. (breast)
SRR444050(SRX128898)
Sample 10cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR015447(SRR015447)
nuclear small RNAs. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577579(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532874(GSM532874)
G699T. (cervix)
SRR191545(GSM715655)
139genomic small RNA (size selected RNA from . (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577741(Rovira)
total RNA. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR444051(SRX128899)
Sample 11cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR189784
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCGC................. 194.500.000.50--------1.00------------------0.50-----------------0.50-----------------0.50--------------------------0.50--0.50-------------------------------------0.50----------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCACGCC................. 193.500.00---------------0.50--------------------------------0.50---------------------------------------------0.50--------0.50-------------0.50--------0.50--0.50-------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCACGC.................. 183.000.00----------------0.50-----------0.50------------0.50----0.50--------------------------------------------0.50------------------------------0.50--------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCCG................. 193.000.00--------------------------------1.00-1.00--------------------------------------------1.00---------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCCGC................ 203.000.00-------------2.00----------------------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCGCC................ 201.500.00-------------------------0.50--------------------0.50------------------------------------------------0.50-----------------------------------------------------------
...............................ACATCCCCCGCCCAGTTAC........................................................................................................................................................................................................ 191.000.00--------------------------------------------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................GCGGGGGTGTGGGGTCCGCC............................................................................. 2021.000.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCCTCC............... 211.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GCTGGTCGAGGCGCCG................... 1611.001.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCTGGTCGAGGCGCCGC................... 1711.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GGAGAAGGAGAAGCGGCGCTGT.......................... 221.000.00------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCCGCC............... 211.000.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CACGCCGCCCCCGCAGA................................................. 171.000.00-----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAC.................... 160.500.00---0.50-------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGGTCGAGGCGCCGC.................... 1620.500.50-----------------------------------------------------------------0.50-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................TGGTCGAGGCGCCGC..................... 1520.500.50---------------------------------------------------------------------------------------------------------0.50-------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCAGCG.................. 180.500.000.50----------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCGGCGCCTCGACCACG................... 170.500.00-------------------------------------------------------------------------------------------------------------0.50---------------------------------------------
.......................................................................................................................................................................................GCGGGGGCGGCGTGC.................................................... 1560.170.17-------------------------------------------------------------------------------------------------------------0.17---------------------------------------------
.................................................................................................................................................CCCCCGCGCCACCCA.......................................................................................... 1580.120.12----------------------------------------------------------------------------------------------------------------------------------------------------------0.12