ID: uc010xac.1_intron_9_0_chr18_13030002_f
GENE: (10)
chr18:13029952-13030513+


(1)
BRAIN
(1)
BREAST
(17)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(4)
OTHER
(8)
SKIN

Sense strand
TGAAAGGCGAACATGTGAATGTCACGAGTCCATCGAAAAGAATAAAGACAGTAAGTGGACTTTTTAAAAAATAGAGTGAAAGAAATAGATGTTCATACATTTTGAATAGGACATATTTTCATGTGAAATGTGCCAGTCTTTCCTGTTGAAATATTTTAGTGTTTTATAGTTTAAACAAAATTTTAAATCTACTTGTACAGGGAGGATTGCTCAGAAATGGTATCTTTTCTCACAGATCTAGTGAAAATGTACCTTTCTAGCTAACTCTTAGCATTCTTTCTTTATTCCTCATTCTCCATTATAGACTTTTTTGTGAGTAAGGCTGGCTTGCTTTCTATCAAAGAGATACTTTTCTTTTGGGGAAATGGGTTTTCCTTTTTCTAACTAGCTTTGGCAAACTTCAGTACTGTTGATAACTAAGGTAGTCATCTGAATTTAAAAAAAATTGAGAATGTTTTGTCATTTTAGTTGTTACATGTGTCATTTGATATTTTGGGAATTTTATTTTTTAGAAACAGATCTCCCACAGAGTGTGGTCTATCAAAATGAAGAGGGTAGGTGG
.....................................................................(((((...((((((......((((((.......))))))((.((((((((.....))))))))))..)))))))))))...............................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..........................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR343334SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
.....................................................................................................................................................................ATAGTTTAAACAAAACTAA..........................................................................................................................................................................................................................................................................................................................................................................................1927.000.0017.0010.00---------------------------------
...........................................................................................................................................................................................................................................................................................ATTCCTCATTCTCCATTATAGACTTTTTGTG........................................................................................................................................................................................................................................................313.000.00--3.00--------------------------------
....................................................................................................................................................................TATAGTTTAAACAAAACTA...........................................................................................................................................................................................................................................................................................................................................................................................193.000.00---------2.00---------------------1.00---
....................................................................................................................................................................TATAGTTTAAACAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................182.000.00-------2.00---------------------------
...............................................................................................................................................................................................................................................................................CATTCTTTCTTTATTCCTCATTCTCCATTACAG..................................................................................................................................................................................................................................................................331.000.00---1.00-------------------------------
..............GTGAATGTCACGAGTCCATCGAAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00---------------------------1.00-------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGAATTTTATTTTTTAG..................................................2011.001.00--------------1.00--------------------
.........AACATGTGAATGTCACGAGTCCATCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------1.00--------
...............................................................................................................................................................................................................................................................................CATTCTTTCTTTATTCCTCATAG............................................................................................................................................................................................................................................................................231.000.00------------------------------1.00----
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTTGTCATTTTAGTTA...........................................................................................191.000.00-----------------------1.00-----------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTCATTTGATATTTTGGGAATTC............................................................261.000.00--1.00--------------------------------
.............TGTGAATGTCACGAGTCCATCGAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------1.00-----------------------
..................................................................................................................................................................................................................................................................................TCTTTCTTTATTCCTTTAG.............................................................................................................................................................................................................................................................................191.000.00---1.00-------------------------------
....................................................................................................................................................................TATAGTTTAAACAAAACAAA..........................................................................................................................................................................................................................................................................................................................................................................................201.000.00-----1.00-----------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCAAAATGAAGAGGGTAGG...2211.001.00--------1.00--------------------------
...............................................................................................................................................................................................CTTGTACAGGGAGGATTGC................................................................................................................................................................................................................................................................................................................................................................1911.001.00----------------1.00------------------
..................................................GTAAGTGGACTTTTTAAAAAATAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------1.00-----
.................................................................................................................................................................................................................................................................................................................CTTTTTTGTGAGTAAGGCTGGCTTG........................................................................................................................................................................................................................................2511.001.00---------------1.00-------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTGATATTTTGGGAA...............................................................1911.001.00--1.00--------------------------------
.....................................................................................................................................................................ATAGTTTAAACAAAACTA...........................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----1.00-----------------------------
...............................................................................................................................................................................................................................................................................................................................................................TTCTTTTGGGGAAATGGGTTTTCCTTTTCC.....................................................................................................................................................................................301.000.00--1.00--------------------------------
....................................................................................................................................................................TATAGTTTAAACAAAACTAA..........................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------1.00---------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGTCATCTGAATTTAAAAAAAATTGA.................................................................................................................3011.001.00------------1.00----------------------
..........................................................................................................................................................................................................................................................................................................................................................TACTTTTCTTTTGGGGAAATA...................................................................................................................................................................................................211.000.00--------------------1.00--------------
...............................................................................................................................................................................................................................................................................CATTCTTTCTTTATTCCTCATTCTCCATCAC....................................................................................................................................................................................................................................................................311.000.00----------1.00------------------------
...............................................................................................................................................................................................................................................................................CATTCTTTCTTTATTCCTCATTCTCCATTATAG..................................................................................................................................................................................................................................................................3311.001.00---1.00-------------------------------
...............................ATCGAAAAGAATAAAGACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------1.00--------------------------
.....................................................................................................................................................................ATAGTTTAAACAAAAAGA...........................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------1.00----------
..........................AGTCCATCGAAAAGAATAAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00----------------------1.00------------
...............................................................................................................................................................TGTTTTATAGTTTAAAGATC...............................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------------------1.00-------------
.........................................................................................................................................................................................................................................................................................................................TGAGTAAGGCTGGCTT.........................................................................................................................................................................................................................................1650.200.20--------------------------------0.20--
..................................GAAAAGAATAAAGACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1770.140.14---------------------------------0.14-

Antisense strand
TGAAAGGCGAACATGTGAATGTCACGAGTCCATCGAAAAGAATAAAGACAGTAAGTGGACTTTTTAAAAAATAGAGTGAAAGAAATAGATGTTCATACATTTTGAATAGGACATATTTTCATGTGAAATGTGCCAGTCTTTCCTGTTGAAATATTTTAGTGTTTTATAGTTTAAACAAAATTTTAAATCTACTTGTACAGGGAGGATTGCTCAGAAATGGTATCTTTTCTCACAGATCTAGTGAAAATGTACCTTTCTAGCTAACTCTTAGCATTCTTTCTTTATTCCTCATTCTCCATTATAGACTTTTTTGTGAGTAAGGCTGGCTTGCTTTCTATCAAAGAGATACTTTTCTTTTGGGGAAATGGGTTTTCCTTTTTCTAACTAGCTTTGGCAAACTTCAGTACTGTTGATAACTAAGGTAGTCATCTGAATTTAAAAAAAATTGAGAATGTTTTGTCATTTTAGTTGTTACATGTGTCATTTGATATTTTGGGAATTTTATTTTTTAGAAACAGATCTCCCACAGAGTGTGGTCTATCAAAATGAAGAGGGTAGGTGG
.....................................................................(((((...((((((......((((((.......))))))((.((((((((.....))))))))))..)))))))))))...............................................................................................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150..........................................................................................................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR037936(GSM510474)
293cand1. (cell line)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR037935(GSM510473)
293cand3. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR029127(GSM416756)
A549. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029124(GSM416753)
HeLa. (hela)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR037937(GSM510475)
293cand2. (cell line)
SRR189785SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037941(GSM510479)
293DroshaTN. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR343334SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAATTGAGAATGTTG......................................................................................................... 202.000.00------1.00---------------------1.00------
.......................................................................................................GAATAGGACATATTTTTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00------------------1.00----------------
............................................................................TGAAAGAAATAGATGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00-----------------1.00-----------------
...................................................................................................................................GCCAGTCTTTCCTGTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................. 171.000.00-------------------1.00---------------
........................................................................AGAGTGAAAGAAATAGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00---1.00-------------------------------
...............................................ACAGTAAGTGGACTTTTTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----1.00------------------------------
...............................................ACAGTAAGTGGACTTTTTAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 221.000.00----1.00------------------------------
......................................................GTGGACTTTTTAAAACTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00----1.00------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTAGTTGTTACACCG................................................................................... 191.000.00-------------------------1.00---------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAATTGAGAATGTTTG........................................................................................................ 211.000.00------1.00----------------------------
.......................................................................CTATTTCTTTCACTCTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1720.500.50----------0.50------------------------
..........................................................................................................................................................................................................................................CATTTTCACTAGATC......................................................................................................................................................................................................................................................................................................................... 1580.120.12----------------------------------0.12