ID: uc010wuq.1_intron_4_0_chr17_79514705_r.3p
GENE: C17orf70(2)
chr17:79514655-79514904-


(1)
AGO1.ip OTHER.mut 		(2)
B-CELL 		(6)
BRAIN 		(6)
BREAST 		(12)
CELL-LINE 		(5)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(1)
HELA 		(6)
LIVER 		(1)
OTHER 		(15)
SKIN 		(1)
TESTES

Sense strand
CAGCTTCCAGAGAGGCTCGGTGTGGGTGGGGCCGGGAGAAACATGCCCCTGGGGCGGGGGCTCACTCTCTGGCGTGGCTCCACACCCACCGTGTGCTTGTCGTGGAGCCAGGCTCGGTGCCTACCAGGCCTGAGTCAAGATGTGGCACCTGGTGCTGTGGGTGTCCCCCCGCTCCCGGGGGTCATGTCTGTCCTTCGCAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAA
..........................................................................(((((((((((.(((...)))...)).)))))))))(((((((.(((.....))))))))))...(((((((.(((((....(((((......)))))..))))).)))))))...............................................................
........................................................................73................................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR189784SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR189783SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................................................................................CCCCCGCTCCCGGGGGGA...................................................................18121.001.0011.0010.00---------------------------------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGGG...................................................................18111.001.005.006.00---------------------------------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGG....................................................................1719.001.007.002.00---------------------------------------------------------
...............................................................................................................................................................................................................................TTGACCAGCGGAACAAGGCACT.....2213.003.00--2.00---1.00----------------------------------------------------
...................................................................................................................................................................................................................................CCAGCGGAACAAGGCACTGGCG.221.000.00-----------------------------------------------1.00-----------
....................................................................................................................................................CTGGTGCTGTGGGTGAACC...................................................................................191.000.00--------------------------------1.00--------------------------
.....................................................................................................................................................TGGTGCTGTGGGTGTCCAA..................................................................................191.000.00-------------------------------------------1.00---------------
.......................................................................................................................................................................................................................GAAGGCGGTTGACCAGCGGAACAA...........2411.001.00--------------1.00--------------------------------------------
.....................................................................................................................................................................................................................AAGAAGGCGGTTGACCAGCGGAACAA...........2611.001.00--------------------------------------------------1.00--------
..................................................................................................................................................................................................................................ACCAGCGGAACAAGGCACTGACA.2311.001.00--1.00--------------------------------------------------------
.....................................................................................................................................................................................................................AAGAAGGCGGTTGACCAGCGGAACAAGGCACT.....3211.001.00----------------------------------------1.00------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGGGCG.................................................................2011.001.00-1.00---------------------------------------------------------
.............................................................................CTCCACACCCACCGTCCC...........................................................................................................................................................181.000.00----------------------1.00------------------------------------
................................................................................................................................................................................................................................TGACCAGCGGAACAAGGCA.......1911.001.00-------------1.00---------------------------------------------
....................................................................................................................................................CTGGTGCTGTGGGTGAAC....................................................................................181.000.00------------------------------------------1.00----------------
...........................................................................GGCTCCACACCCACCGTT.............................................................................................................................................................181.000.00------------------------1.00----------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGGGG..................................................................1911.001.001.00----------------------------------------------------------
...............................................................................................................................................................................................................................TTGACCAGCGGAACAAGT.........181.000.00-------------------1.00---------------------------------------
........AGAGAGGCTCGGTGTGGGTGG.............................................................................................................................................................................................................................2111.001.00----------------1.00------------------------------------------
.....................................................................................................................................................................................................................AAGAAGGCGGTTGACCAGCGGAACA............2511.001.00----------------------------------------------1.00------------
..................................................................................................................................................ACCTGGTGCTGTGGGCT.......................................................................................171.000.00---------------------------1.00-------------------------------
.....................................................................................................GTGGAGCCAGGCTCGGTG...................................................................................................................................1811.001.00--------------------1.00--------------------------------------
......................................................................................................................................................................................................................................GCGGAACAAGGCACTGACA.1911.001.00------------------------------------------------1.00----------
.............................................................................................................................................................................................................................GGTTGACCAGCGGAACAAGGCACTG....2511.001.00--------------------------1.00--------------------------------
.....................................................................................................................................................TGGTGCTGTGGGTGTTGC...................................................................................181.000.00--------1.00--------------------------------------------------
.......CAGAGAGGCTCGGTGGA..................................................................................................................................................................................................................................171.000.00-------------------------------------------------1.00---------
.....................................................................................................................................................................................................................................AGCGGAACAAGGCACT.....1621.001.00--------------------------------------------1.00--------------
.......................................................................................................................................................................................................................GAAGGCGGTTGACCAGCGGAACA............2311.001.00-----------------------------------------1.00-----------------
..................................................................................................................................................................GTCCCCCCGCTCCCGCCG......................................................................181.000.00---1.00-------------------------------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGG.....................................................................1611.001.001.00----------------------------------------------------------
...........................................................................................................................................................................................................................GCGGTTGACCAGCGGAACAAG..........2111.001.00-------------------------------------1.00---------------------
.........................................................................................CGTGTGCTTGTCGTGGAGCCA............................................................................................................................................2111.001.00-----------------1.00-----------------------------------------
...................................................................................................................................................................................................................................CCAGCGGAACAAGGCACT.....1811.001.00------1.00----------------------------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGGC...................................................................1811.001.001.00----------------------------------------------------------
.....................................................................................................................................................................................................................................AGCGGAACAAGGCACTGACA.2011.001.00--1.00--------------------------------------------------------
......................................................................................................................................................................CCCCGCTCCCGGGGGGGG..................................................................1830.330.33-----------------------------------------------------0.33-----
......................................................................................................................................................................CCCCGCTCCCGGGGG.....................................................................1530.330.33----------------------------------------------------0.33------
.....................................................................................................................................................................CCCCCGCTCCCGGGG......................................................................1540.250.25-------------------------------------------------------0.25---
........................................ACATGCCCCTGGGGC...................................................................................................................................................................................................1580.120.12----------------------------------------------------------0.12

Antisense strand
CAGCTTCCAGAGAGGCTCGGTGTGGGTGGGGCCGGGAGAAACATGCCCCTGGGGCGGGGGCTCACTCTCTGGCGTGGCTCCACACCCACCGTGTGCTTGTCGTGGAGCCAGGCTCGGTGCCTACCAGGCCTGAGTCAAGATGTGGCACCTGGTGCTGTGGGTGTCCCCCCGCTCCCGGGGGTCATGTCTGTCCTTCGCAGAGTGTCTTTTCTAAAGAAGGCGGTTGACCAGCGGAACAAGGCACTGACAA
..........................................................................(((((((((((.(((...)))...)).)))))))))(((((((.(((.....))))))))))...(((((((.(((((....(((((......)))))..))))).)))))))...............................................................
........................................................................73................................................................................................................187.............................................................
SizePerfect hitTotal NormPerfect NormSRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		TAX577589(Rovira)
total RNA. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		GSM532886(GSM532886)
G850T. (cervix)		SRR189784SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		TAX577746(Rovira)
total RNA. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR040037(GSM532922)
G243T. (cervix)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR189783SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR444062(SRX128910)
Sample 27_3cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.................................................................................................................................................................................................TTCGCAGAGTGTCTTAGTG...................................... 193.000.00------------------1.00----1.00---------1.00-------------------------
...................................GAGAAACATGCCCCTGGT..................................................................................................................................................................................................... 183.000.00----1.00--1.00-------1.00-------------------------------------------
...................................GAGAAACATGCCCCTGCT..................................................................................................................................................................................................... 182.000.00----1.00-------------------------------1.00----------------------
...............................................................................................................................................................CGGGAGCGGGGGGACACC......................................................................... 1812.002.00---------2.00-------------------------------------------------
....................................................................................................................................................................CCCCCCGCTCCCGGGCCAC................................................................... 192.000.00-----------------------------1.00---------1.00-------------------
.....................................................................................................................................................................CCCCCGGGAGCGGGGG..................................................................... 1612.002.00---------------------1.00---------1.00---------------------------
.....................................................................................................................................................................CCCCGGGAGCGGGGG...................................................................... 1541.751.75-0.50-------------------------------------------------0.50--0.25-0.250.25-
....................................................................................................................................................................CCCCCCGCTCCCGGGGGC.................................................................... 181.000.00-------1.00---------------------------------------------------
............................................GCCCCTGGGGCGGGGGCG............................................................................................................................................................................................ 181.000.001.00----------------------------------------------------------
..................................................................................................................................................................CCGGGAGCGGGGGGAC........................................................................ 1611.001.00-----------1.00-----------------------------------------------
...................................................................................................................................................................CCGGGAGCGGGGGGA........................................................................ 1511.001.00--------------------------------------1.00--------------------
...............................................................................................................................................................GGTGTCCCCCCGCTCCCA......................................................................... 181.000.00-----1.00-----------------------------------------------------
.....................................................................................................................................................................CCCCCGCTCCCGGGGGACC.................................................................. 1911.000.00--------1.00--------------------------------------------------
....................................................................................................................................................CTGGTGCTGTGGGTGAAC.................................................................................... 181.000.00-----1.00-----------------------------------------------------
...................................GAGAAACATGCCCCTGG...................................................................................................................................................................................................... 171.000.00---------------------------------------------1.00-------------
..................................GGAGAAACATGCCCCTTGG..................................................................................................................................................................................................... 191.000.00----------------------------1.00------------------------------
..................................................................................................................................................................................................TCGCAGAGTGTCTTTCAG...................................... 181.000.00---1.00-------------------------------------------------------
..................................................................................................................................................................GTCCCCCCGCTCCCGCACC..................................................................... 191.000.00-------------------------1.00---------------------------------
....................................................................................................................................................CTGGTGCTGTGGGTGTCC.................................................................................... 181.000.00------------1.00----------------------------------------------
..............GCTCGGTGTGGGTGGACG.......................................................................................................................................................................................................................... 181.000.00----------1.00------------------------------------------------
..................................................................................................................................................ACCTGGTGCTGTGGGTGCACC................................................................................... 211.000.00------------------------------1.00----------------------------
....................................................................................................................................................................CCCCCCGCTCCCGGGGCA.................................................................... 181.000.00-----------------------------------1.00-----------------------
...........................................................................................................................................................................................TAGAAAAGACACTCTGCGAAGGACAG..................................... 2611.001.00----------------------------------1.00------------------------