ID: uc010wde.1_intron_6_0_chr17_35899348_r.3p
GENE: (15)
chr17:35899298-35899547-


(2)
AGO2.ip
(1)
B-CELL
(20)
BREAST
(12)
CELL-LINE
(1)
CERVIX
(2)
HEART
(1)
HELA
(1)
KIDNEY
(6)
LIVER
(3)
OTHER
(54)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
CATGCCACTGCACTTCAGCCTGGGCAACAGAGCAAGACCCTATCTCAAAACAAAAACAAAAACAAAAAAAACATAAACTGCTTGAACTAGAGTGATCGTAATAAAAAGGAAAGTCCTCCAAGCACTTTGAATTGACAGAGTCATCAATAGAAGATTCCAGGTTTGTGTGTTTAACCCAGTTCTTTTTAACAAATTCACAGGAAAATGAGAGATATGCATATGAATGGCAGAGATGCCTGGGGAGTGCCCT
....................................................................................................................................................((((((.....((((.........))))....))))))................................................................
...............................................................................................................................................144.....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784
....................................................................................................................................................AGAAGATTCCAGGTTCGGC...................................................................................19241.000.00-1.0013.0012.0014.0013.009.0014.0011.0011.00-8.007.005.007.006.006.00-5.005.003.004.003.003.001.003.004.004.003.004.004.002.002.002.003.002.002.001.00-3.001.002.002.00-1.00-1.001.00--1.002.00-1.00-1.001.00-2.002.001.001.001.001.001.00--1.001.001.00--1.001.001.001.00-1.001.00-----1.001.00-1.001.001.00-1.00-----1.001.001.00----------
....................................................................................................................................................AGAAGATTCCAGGTTCGTC...................................................................................1942.000.00--4.002.00-2.003.00-1.00--2.002.004.001.002.00----1.001.00--2.001.00--1.00--1.00-1.00--1.00-------1.001.00-1.00-2.001.00------2.00--1.00----------1.00--------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTCGT....................................................................................188.000.00-----------------------1.00--------------1.00-1.00--2.00---------1.001.00----------------------------1.00--------------------------
....................................................................................................................................................AGAAGATTCCAGGTTCGG....................................................................................186.000.00---2.001.00---------------------------------------------------------------------------1.00---------------1.00----1.00--------
....................................................................................................................................................AGAAGATTCCAGGTTCATC...................................................................................196.000.00-----------------6.00--------------------------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTGGC...................................................................................193.000.00--1.00---2.00-------------------------------------------------------------------------------------------------------
..TGCCACTGCACTTCAGCCGGGC..................................................................................................................................................................................................................................222.000.002.00-------------------------------------------------------------------------------------------------------------
...................................................................................................................................................TAGAAGATTCCAGGTTC......................................................................................172.000.00------------1.00-----------------------------------------1.00-------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTCCT....................................................................................182.000.00---------1.00---------------------------------------------1.00------------------------------------------------------
..............TCAGCCTGGGCAACAGAGCAAGACCGTC................................................................................................................................................................................................................282.000.00-2.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGAGATGCCTGGGGAGTGCC..2012.002.00------------------------------------------------2.00-------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTCT.....................................................................................172.000.00----------------------------------------------------------------------------------1.00----------1.00----------------
....................................................................................................................................................AGAAGATTCCAGGTTCTC....................................................................................182.000.00--------------------1.00------------------------1.00----------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTGACTC.................................................................................211.000.00--------------------------------1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................CTTTTTAACAAATTCAAGTG.................................................201.000.00---------------------------------------------------------------------------------1.00----------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTGTCTCC................................................................................221.000.00-----------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................AGAAGATTCCAGGTTT......................................................................................1651.001.00----0.20--------------0.20--------------------0.20-----------------------0.20-------------------------------------------0.20-
....................................................................................................................................................AGAAGATTCCAGGTTCC.....................................................................................171.000.00------------------------------------------------------------------------------------------------------1.00-------
...................................................................................................................................................TAGAAGATTCCAGGTTTC.....................................................................................181.000.00-------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................TAGAAGATTCCAGGTTCG.....................................................................................181.000.00--------------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................GAAGATTCCAGGTTTAAC...................................................................................181.000.00--------1.00-----------------------------------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTCGGT...................................................................................191.000.00-------------------------------------1.00------------------------------------------------------------------------
...................................................................................................................................................TAGAAGATTCCAGGTACC.....................................................................................181.000.00--------------------------------------1.00-----------------------------------------------------------------------
................AGCCTGGGCAACAGAGCAAGACCCTACCCA............................................................................................................................................................................................................301.000.001.00-------------------------------------------------------------------------------------------------------------
....................TGGGCAACAGAGCAAGACCCTATGGGG...........................................................................................................................................................................................................271.000.00-1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTGCG....................................................................................181.000.00----------------------1.00---------------------------------------------------------------------------------------
..........................................................................AAACTGCTTGAACTAGAGTGATCGTAATAAA.................................................................................................................................................3111.001.00----------------------------------------------------------------------------1.00---------------------------------
.......................................................................................................................................................AGATTCCAGGTTTGTCTA.................................................................................181.000.00----------------------------------------------------------------------------------------------1.00---------------
....................................................................................................................................................AGAAGATTCCAGGTTCGGA...................................................................................191.000.00------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................AGAGATGCCTGGGGAGTGCCCCGA241.000.00-1.00------------------------------------------------------------------------------------------------------------
....................................................................................AACTAGAGTGATCGTAATAAAAAG..............................................................................................................................................2411.001.00--------------------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................AAATGAGAGATATGCATAT.............................1911.001.00-----------------------------------------------------------------1.00--------------------------------------------
.......................................................................CATAAACTGCTTGAACTCTG...............................................................................................................................................................201.000.00--1.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................TAGAAGATTCCAGGTTCGGC...................................................................................201.000.00-----------------------------------1.00--------------------------------------------------------------------------
.............TTCAGCCTGGGCAACAGAGCAAGACCCCTC...............................................................................................................................................................................................................301.000.00-1.00------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................ATGCCTGGGGAGTGCAGA181.000.00----------------------------------------------------------------------1.00---------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTAGGC...................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00---------
....................................................................................................................................................AGAAGATTCCAGGTTTGGCTC.................................................................................211.000.00-------------------------------------------------------------------------------------------------------1.00------
....................................................................................................................................................AGAAGATTCCAGGTTCAGC...................................................................................191.000.00----------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTAG.....................................................................................171.000.00------------------------------------------------------------------------------------------1.00-------------------
.....................................................................................................................................................GAAGATTCCAGGTTTG.....................................................................................1640.750.75-----------0.25------0.25------------0.25------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TATGAATGGCAGAGATG...............1720.500.50--------------------------------------------------------------0.50-----------------------------------------------
......................................................................................................................................................AAGATTCCAGGTTTGT....................................................................................1650.400.40-------------------------------0.20-------------------------------------------------------------------------0.20----
......................................................................................................................................................................................................AGGAAAATGAGAGATATG..................................1830.330.33--------------------------------------------------------------------------------------------------------0.33-----
.................................................................................................................................................AATAGAAGATTCCAGGT........................................................................................1730.330.33----------------------0.33---------------------------------------------------------------------------------------
.....................................................................................................................................................GAAGATTCCAGGTTTGGCTC.................................................................................2040.250.75------0.25-------------------------------------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTCTCC..................................................................................2050.201.00--------------------------------0.20-----------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTTA....................................................................................1850.201.00----------------------------------------------------------------------------------------------------------0.20---
....................................................................................................................................................AGAAGATTCCAGGTTTC.....................................................................................1750.201.00-----------------------0.20--------------------------------------------------------------------------------------
....................................................................................................................................................AGAAGATTCCAGGTTTCT....................................................................................1850.201.00-----------------------------------------------------------------------------------------------------------0.20--
.......................................................................................................AAAAGGAAAGTCCTCC...................................................................................................................................1660.170.17-------------------------------------------------------------------------------------------------------------0.17

Antisense strand
CATGCCACTGCACTTCAGCCTGGGCAACAGAGCAAGACCCTATCTCAAAACAAAAACAAAAACAAAAAAAACATAAACTGCTTGAACTAGAGTGATCGTAATAAAAAGGAAAGTCCTCCAAGCACTTTGAATTGACAGAGTCATCAATAGAAGATTCCAGGTTTGTGTGTTTAACCCAGTTCTTTTTAACAAATTCACAGGAAAATGAGAGATATGCATATGAATGGCAGAGATGCCTGGGGAGTGCCCT
....................................................................................................................................................((((((.....((((.........))))....))))))................................................................
...............................................................................................................................................144.....................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577580(Rovira)
total RNA. (breast)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189783SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR029124(GSM416753)
HeLa. (hela)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
TAX577742(Rovira)
total RNA. (breast)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191410(GSM715520)
20genomic small RNA (size selected RNA from t. (breast)
SRR343334SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
TAX577746(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM956925AGO2Paz8(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
TAX577744(Rovira)
total RNA. (breast)
SRR191625(GSM715735)
32genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR040027(GSM532912)
G220T. (cervix)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR189782SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784
...............................................AAACAAAAACAAAAACAAAAAAAACCCC............................................................................................................................................................................... 2825.000.0021.004.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACACTG.............................................................................................................................................................................. 2825.000.0017.008.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACACG............................................................................................................................................................................... 2816.000.0010.005.00--------1.00---------------------------------------------------------------------------------------------------
.................................................ACAAAAACAAAAACAAAAAAAACACTTG............................................................................................................................................................................. 2810.000.004.005.00--------1.00---------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACTCC............................................................................................................................................................................... 299.000.003.006.00------------------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAAACGGC................................................................................................................................................................................ 297.000.007.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAACTCC................................................................................................................................................................................ 285.000.001.004.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACCCTC.............................................................................................................................................................................. 285.000.004.001.00------------------------------------------------------------------------------------------------------------
............................................TCAAAACAAAAACAAAAACAAAAAAAAACGC............................................................................................................................................................................... 314.000.002.002.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAACCTC................................................................................................................................................................................. 274.000.001.003.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACCCCC.............................................................................................................................................................................. 294.000.002.002.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACCCC................................................................................................................................................................................ 274.000.003.001.00------------------------------------------------------------------------------------------------------------
.................................................ACAAAAACAAAAACAAAAAAAACTTG............................................................................................................................................................................... 264.000.003.001.00------------------------------------------------------------------------------------------------------------
....................................................AAAACAAAAACAAAAAAAACGGTC.............................................................................................................................................................................. 243.000.003.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACGC................................................................................................................................................................................. 263.000.003.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACCC................................................................................................................................................................................ 272.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAACCCT................................................................................................................................................................................ 262.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACCC................................................................................................................................................................................ 262.000.001.001.00------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAAGGG................................................................................................................................................................................. 232.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAACGA................................................................................................................................................................................... 232.000.00-2.00------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAAACCTTC.............................................................................................................................................................................. 262.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAACCAG................................................................................................................................................................................... 232.000.00-1.00--------1.00---------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACCTC............................................................................................................................................................................... 272.000.001.001.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACACGA.............................................................................................................................................................................. 292.000.002.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAACGC.................................................................................................................................................................................. 262.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTTC................................................................................................................................................................................. 252.000.002.00-------------------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAACGGC................................................................................................................................................................................. 282.000.002.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAACGCA................................................................................................................................................................................. 272.000.001.001.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACCTG............................................................................................................................................................................... 282.000.001.00---------1.00---------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACTAC................................................................................................................................................................................ 272.000.002.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTGC................................................................................................................................................................................. 252.000.001.001.00------------------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAAAACACC............................................................................................................................................................................... 302.000.002.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACCTCC.............................................................................................................................................................................. 302.000.001.001.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACTC................................................................................................................................................................................ 282.000.002.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACTTC............................................................................................................................................................................... 281.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAACGCT................................................................................................................................................................................. 261.000.001.00-------------------------------------------------------------------------------------------------------------
............................................TCAAAACAAAAACAAAAACAAAAAAAACG................................................................................................................................................................................. 291.000.001.00-------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAGGTC................................................................................................................................................................................. 231.000.00-1.00------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAAACCTC............................................................................................................................................................................... 251.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACCCG................................................................................................................................................................................ 271.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAACTGT................................................................................................................................................................................ 281.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAAATC................................................................................................................................................................................ 281.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACACA............................................................................................................................................................................... 281.000.00-1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................TTTTAACAAATTCACGGGA................................................ 191.000.00--------------------------------------------------------------------------------------1.00-----------------------
................................................AACAAAAACAAAAACAAAACGG.................................................................................................................................................................................... 221.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACCTG................................................................................................................................................................................. 251.000.00-1.00------------------------------------------------------------------------------------------------------------
...................................................AAAAACAAAAACAAAAAAAACACGGC............................................................................................................................................................................. 261.000.001.00-------------------------------------------------------------------------------------------------------------
............................................TCAAAACAAAAACAAAAACAAAAAAAAACG................................................................................................................................................................................ 301.000.00----------1.00---------------------------------------------------------------------------------------------------
..................CCTGGGCAACAGAGCAAGACCCTATCTACGG......................................................................................................................................................................................................... 311.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAACGCT................................................................................................................................................................................. 271.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACGG................................................................................................................................................................................. 261.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAACCG................................................................................................................................................................................. 251.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACCC.................................................................................................................................................................................. 241.000.00-1.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAACTAG................................................................................................................................................................................. 261.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTCT................................................................................................................................................................................. 251.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAACCTT.................................................................................................................................................................................. 241.000.00-1.00------------------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAAAACACCCT............................................................................................................................................................................. 321.000.00-1.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACTTG............................................................................................................................................................................... 291.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAACTCG................................................................................................................................................................................... 231.000.001.00-------------------------------------------------------------------------------------------------------------
....................................................AAAACAAAAACAAAAAAAACACGCT............................................................................................................................................................................. 251.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAACTCG................................................................................................................................................................................. 271.000.001.00-------------------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAAACAC................................................................................................................................................................................. 281.000.001.00-------------------------------------------------------------------------------------------------------------
...........................CAGAGCAAGACCCTATCTGCTG......................................................................................................................................................................................................... 221.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAACCCC.................................................................................................................................................................................. 241.000.00----------1.00---------------------------------------------------------------------------------------------------
.............................................CAAAACAAAAACAAAAACAAAAAAAACCCT............................................................................................................................................................................... 301.000.001.00-------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAGGCT................................................................................................................................................................................. 231.000.00-1.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAACATC................................................................................................................................................................................ 281.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACACCG.............................................................................................................................................................................. 281.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACTCA............................................................................................................................................................................... 291.000.00-1.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAAAACG............................................................................................................................................................................... 291.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTCC................................................................................................................................................................................. 251.000.00-1.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACTGG................................................................................................................................................................................ 271.000.00-1.00------------------------------------------------------------------------------------------------------------
.................................................ACAAAAACAAAAACAAAAAAAACTCG............................................................................................................................................................................... 261.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACGTC............................................................................................................................................................................... 281.000.00-1.00------------------------------------------------------------------------------------------------------------
.......................................CTATCTCAAAACAAAAACAAAAACAAAAAAGCT.................................................................................................................................................................................. 331.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACCC................................................................................................................................................................................ 261.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACTGG............................................................................................................................................................................... 281.000.00-1.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACGTT............................................................................................................................................................................... 291.000.001.00-------------------------------------------------------------------------------------------------------------
.....CACTGCACTTCAGCCTGGTTGC............................................................................................................................................................................................................................... 221.000.00-------------------------------------------------------------------------------1.00------------------------------
.CAGGCTGAAGTGCAGTGGCAT.................................................................................................................................................................................................................................... 2101.001.00--------------------------------------------------------------------------------------------1.00-----------------
................................................AACAAAAACAAAAACAAAAACTCG.................................................................................................................................................................................. 241.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAACGAG................................................................................................................................................................................... 231.000.00-1.00------------------------------------------------------------------------------------------------------------
...................................................AAAAACAAAAACAAAAAAAACACG............................................................................................................................................................................... 241.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAACACGG.............................................................................................................................................................................. 281.000.00-1.00------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACCTCG.............................................................................................................................................................................. 291.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTCG................................................................................................................................................................................. 251.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAATC................................................................................................................................................................................... 231.000.00-1.00------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAAACGATC.............................................................................................................................................................................. 261.000.00-1.00------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACCCT............................................................................................................................................................................... 291.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACCG.................................................................................................................................................................................. 241.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACACCAG............................................................................................................................................................................. 301.000.001.00-------------------------------------------------------------------------------------------------------------
..................................................CAAAAACAAAAACAAAAAAAAGGG................................................................................................................................................................................ 241.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAAACCTTC.............................................................................................................................................................................. 291.000.001.00-------------------------------------------------------------------------------------------------------------
.................................................ACAAAAACAAAAACAAAAAAAACACTCG............................................................................................................................................................................. 281.000.001.00-------------------------------------------------------------------------------------------------------------
..............................................AAAACAAAAACAAAAACAAAAAAAACAGC............................................................................................................................................................................... 291.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAACTGG................................................................................................................................................................................. 251.000.00-1.00------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAAATG................................................................................................................................................................................. 251.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................................................................CGTAATAAAAAGGAACTTC....................................................................................................................................... 191.000.00------------------------------------------------------------------1.00-------------------------------------------
................................................AACAAAAACAAAAACAAAAAAACTCT................................................................................................................................................................................ 261.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAAACTAG................................................................................................................................................................................ 271.000.001.00-------------------------------------------------------------------------------------------------------------
...............................................AAACAAAAACAAAAACAAAAAACGC.................................................................................................................................................................................. 251.000.001.00-------------------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAACCTG................................................................................................................................................................................ 261.000.00----------1.00---------------------------------------------------------------------------------------------------
................................................AACAAAAACAAAAACAAAAAAACTCC................................................................................................................................................................................ 261.000.00-1.00------------------------------------------------------------------------------------------------------------
............................................TGTTTTTTTTGTTTTTGTTTTTGTTTTGA................................................................................................................................................................................. 2980.620.620.62-------------------------------------------------------------------------------------------------------------
...........................GTTTTTGTTTTGAGATAGGGTCTTGCTCTG................................................................................................................................................................................................. 3030.330.33---------------------------------------------------------------0.33----------------------------------------------
............................................TCAAAACAAAAACAAAAACAAAAAAAACAACG.............................................................................................................................................................................. 320.120.00-0.12------------------------------------------------------------------------------------------------------------