ID: uc010vvo.1_intron_12_0_chr17_12906817_r.3p
GENE: (6)
chr17:12906767-12907016-


(2)
B-CELL 		(6)
BREAST 		(7)
CELL-LINE 		(1)
KIDNEY 		(4)
LIVER 		(2)
OTHER 		(5)
SKIN 		(4)
UTERUS

Sense strand
GTGGAGGCTGTCAGCTCACTGCAGTGCTGCAGAGGGCCGCACGATACCCCTCCCTGGCTGCGTGGTCCCTGTCTTGGTGTGTCCTGAGTCTGCATCACTTTGTAAAGCCCCACTCTTCTGCCCAGGTACCAAGGAAAGGCAGATGCCCCCGTGGCCTTGGTGGTTCACATGGCCCCAGCATCTGTGCTTGTGGACAGCAGGTACCAGCAGTGGATGGAGAGGTATGGAGCCCAGCCCAGCGGCACTTGGG
..........................................................................................................(((........(((((.(((..(((.((...(((....))).)).)))))).))))).......))).............................................................................
...................................................................................................100........................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577742(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334TAX577588(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
.........................................................................................................................................................GCCTTGGTGGTTCACGG................................................................................1711.000.008.00-2.001.00----------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACTGG...............................................................................188.000.00-1.00--1.00---------2.00--1.00--------1.001.001.00---
.........................................................................................................................................................GCCTTGGTGGTTCACCG................................................................................177.000.005.001.00-1.00----------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACTGGT..............................................................................194.000.001.001.00----1.001.00------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGT................................................................................174.000.003.00--1.00----------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGGG...............................................................................184.000.001.002.00----1.00-------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACCGGT..............................................................................193.000.001.001.00-1.00----------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGGGT..............................................................................193.000.00-1.001.00--------1.00--------------------
.........................................................................................................................................................GCCTTGGTGGTTCACAGGT..............................................................................192.000.00----1.00---1.00-----------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGGGG..............................................................................192.000.00--1.001.00----------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACCGGG..............................................................................192.000.001.00------------1.00------------------
.........................................................................................................................................................GCCTTGGTGGTTCACAGG...............................................................................182.000.001.00-1.00-----------------------------
..............................................................................................................................................................................................................GCAGTGGATGGAGAGGTTT.........................192.000.00------------2.00-------------------
.........................................................................................................................................................GCCTTGGTGGTTCACATGTA.............................................................................202.000.001.00-1.00-----------------------------
............................................................................................................................................................................................TGTGGACAGCAGGTACCAGCAGTGGATGG.................................2911.001.00----------1.00---------------------
.............................................................................................................................................................................................................AGCAGTGGATGGAGAGGTTT.........................201.000.00------1.00-------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACTT................................................................................171.000.001.00-------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACAGGTA.............................................................................201.000.00-1.00------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGGC...............................................................................181.000.00--1.00-----------------------------
...................................................................................................................................................................................................AGCAGGTACCAGCAGTGGATGGAGAGGGCG.........................301.000.00---------------1.00----------------
.........................................................................................................................................................GCCTTGGTGGTTCACTCG...............................................................................181.000.00-1.00------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGCGT..............................................................................191.000.00-----1.00--------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACATGGAGAA..........................................................................231.000.00-1.00------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACAGGTC.............................................................................201.000.00-----1.00--------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACACGTA.............................................................................201.000.001.00-------------------------------
.................................................................................................................................................CCCCCGTGGCCTTGGTG........................................................................................1711.001.00-------------------------1.00------
.........................................................................................................................................................GCCTTGGTGGTTCACAGGCA.............................................................................201.000.001.00-------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACATGTAGT...........................................................................221.000.00-1.00------------------------------
........................................................................................................AAGCCCCACTCTTCTCAG................................................................................................................................181.000.00----------------1.00---------------
.........................................................................................................................................................GCCTTGGTGGTTCACGTTT..............................................................................191.000.00-------------1.00------------------
.........................................................................................................................................................GCCTTGGTGGTTCACCGG...............................................................................181.000.00-----1.00--------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACGGGC..............................................................................191.000.00-------1.00------------------------
......................................................................................................................................................................................TGTGCTTGTGGACAGCAGGTA...............................................2111.001.00--------------------1.00-----------
.........................................................................................................................................................GCCTTGGTGGTTCACTC................................................................................171.000.00---------------------1.00----------
...........................................................................................................................................................................................TTGTGGACAGCAGGTACCAGCAGTGGATGGAGAG.............................3411.001.00-------------------1.00------------
.............................................................................................................................................................................................GTGGACAGCAGGTACCAGCAGTGGATGGAGAG.............................3211.001.00---------1.00----------------------
................................................................................................................................CCAAGGAAAGGCAGATGCCCCCGTGGCCTCGG..........................................................................................321.000.00-----------------------1.00--------
.........................................................................................................................................................GCCTTGGTGGTTCACATTTGG............................................................................211.000.00-1.00------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACCGA...............................................................................181.000.00----1.00---------------------------
.......................................................................................................................GCCCAGGTACCAAGGAAAGGCAGATGCCCCC....................................................................................................3111.001.00---------1.00----------------------
......................................................................................................................................................................................................AGGTACCAGCAGTGGATGG.................................1911.001.00----------------------1.00---------
.........................................................................................................................................................GCCTTGGTGGTTCACGAG...............................................................................181.000.00-----1.00--------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACTGA...............................................................................181.000.00----1.00---------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACATGGAG............................................................................211.000.00-1.00------------------------------
.........................................................................................................................................................GCCTTGGTGGTTCACAGCCA.............................................................................201.000.00--------1.00-----------------------
.........................................................................................................................................................GCCTTGGTGGTTCACATGCTGC...........................................................................221.000.001.00-------------------------------
.............................................................................................................................................................................................................AGCAGTGGATGGAGAGGTTTG........................211.000.00------------------------1.00-------
.........................................................................................................................................................GCCTTGGTGGTTCACCT................................................................................171.000.00-1.00------------------------------
................................................................................................................................................................................................................AGTGGATGGAGAGGTTT.........................171.000.00--1.00-----------------------------
......................................................................GTCTTGGTGTGTCCTGAGTCTGCATCAC........................................................................................................................................................2811.001.00------------------1.00-------------
...........................................................................................................................AGGTACCAAGGAAAGGCAGAT..........................................................................................................2111.001.00-----------1.00--------------------
...................................................................................................................TTCTGCCCAGGTACC........................................................................................................................1530.330.33-----------------------------0.33--
.............................................................................................................................................................TGGTGGTTCACATGGC.............................................................................1630.330.33---------------0.33----------------

Antisense strand
GTGGAGGCTGTCAGCTCACTGCAGTGCTGCAGAGGGCCGCACGATACCCCTCCCTGGCTGCGTGGTCCCTGTCTTGGTGTGTCCTGAGTCTGCATCACTTTGTAAAGCCCCACTCTTCTGCCCAGGTACCAAGGAAAGGCAGATGCCCCCGTGGCCTTGGTGGTTCACATGGCCCCAGCATCTGTGCTTGTGGACAGCAGGTACCAGCAGTGGATGGAGAGGTATGGAGCCCAGCCCAGCGGCACTTGGG
..........................................................................................................(((........(((((.(((..(((.((...(((....))).)).)))))).))))).......))).............................................................................
...................................................................................................100........................................................................174..........................................................................
SizePerfect hitTotal NormPerfect NormSRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		TAX577580(Rovira)
total RNA. (breast)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037937(GSM510475)
293cand2. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577742(Rovira)
total RNA. (breast)		TAX577738(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR343334TAX577588(Rovira)
total RNA. (breast)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		TAX577744(Rovira)
total RNA. (breast)		SRR029131(GSM416760)
MCF7. (cell line)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
..........................................................................................................TCCTTGGTACCTGGGCAGAAGAGTGGGGC................................................................................................................... 2911.001.00----------1.00---------------------
.................................................................................................................................................................................CCACAAGCACAGATGC......................................................... 1620.500.50-----------------------------0.50--
............................................................................................................CCTGGGCAGAAGAGTGGG............................................................................................................................ 1820.500.50------------------------------0.50-
..............................................................................................GGCTTTACAAAGTGA............................................................................................................................................. 1540.250.25-------------------------------0.25