uc010vtd.1_intron_0_0_chr17_6483185

ATAGGTGTGCATGCCACCACGCCCGGCTAATTTTATGTATTTTTAGTAGAGACCGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGTCCATCTTGGCCTCCCAAAGTGCTGGGATGACAGGTGTGAGCCACCGCGCCTGGCCTTGTACATACCTTTAGTTGTGTTGTTTGTCTTCCAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAAC
................................................((((((((.((...((.....))..)).)))))))).....((((....))))..((((((.(((((..((((.....)).))..)))))))))))(((......)))..............................................................................................
............................................45...............................................................................................................158..........................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)

SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)

SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)

SRR038861(GSM458544)
MM466. (cell line)

SRR390723(GSM850202)
total small RNA. (cell line)

SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)

RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)

SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)

SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)

SRR207117(GSM721079)
Whole cell RNA. (cell line)

SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)

DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

GSM532929(GSM532929)
G702N. (cervix)

DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)

SRR040036(GSM532921)
G243N. (cervix)

SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)

SRR189782

SRR037937(GSM510475)
293cand2. (cell line)

SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)

SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)

SRR015447(SRR015447)
nuclear small RNAs. (breast)

DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)

SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)

SRR553576(SRX182782)
source: Testis. (testes)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)

SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

...................................................................................................................................TGGGATGACAGGTGTGAGCCAAA................................................................................................

8.00

0.00

4.00

2.00

1.00

...........TGCCACCACGCCCGGCTAAGCCT........................................................................................................................................................................................................................

4.00

0.00

3.00

1.00

................................................................................................................................TGCTGGGATGACAGGTGTGAGAAT..................................................................................................

3.00

0.00

3.00

......................................ATTTTTAGTAGAGACCGGGTTTCACCATGGCC....................................................................................................................................................................................

3.00

0.00

3.00

..........................................................................................................................................ACAGGTGTGAGCCACCGCGCCTGGCGGAC...................................................................................

3.00

0.00

2.00

1.00

..........................................................................................................................................ACAGGTGTGAGCCACCGCGCCTGGGGA.....................................................................................

2.00

0.00

2.00

.........................................................................................................................CCCAAAGTGCTGGGATGACAGGTGCCC......................................................................................................

2.00

0.00

2.00

..................................................................................................................................CTGGGATGACAGGTGTGAGAAGA.................................................................................................

2.00

0.00

2.00

..........................................TTAGTAGAGACCGGGTTTCACGT.........................................................................................................................................................................................

2.00

0.00

2.00

...............................................................................................................................................................................................................................AAGCTCTGGGTGCTGTGGCTGGGTC..

1.00

0.00

1.00

.................................................................................................................................GCTGGGATGACAGGTGTGAGC....................................................................................................

1.00

...................................................................................................................................TGGGATGACAGGTGTGAGCCAT.................................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCA..................................................................................................

1.00

...............................................................................................................................................TGTGAGCCACCGCGCCTGGCCTTGCAGC...............................................................................

1.00

0.00

1.00

0.00

1.00

.................................................................................................................................GCTGGGATGACAGGTGTGAGCC...................................................................................................

1.00

........................................TTTTAGTAGAGACCGGGTTTGCC...........................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................TGGGATGACAGGTGTGAGCCAAAT...............................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCAATA...............................................................................................

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCATTTT..............................................................................................

1.00

0.00

1.00

.................................................................................................................................GCTGGGATGACAGGTGTGAGCCCT.................................................................................................

1.00

................................................................................................................................TGCTGGGATGACAGGTGTGAGAA...................................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGAAA..................................................................................................

1.00

0.00

1.00

...............................................................................................................................................TGTGAGCCACCGCGCCTGGCGGG....................................................................................

1.00

0.00

1.00

.........CATGCCACCACGCCCGGCTAATTTGTGC.....................................................................................................................................................................................................................

1.00

0.00

1.00

.................................................AGACCGGGTTTCACCATGTTGGAAC................................................................................................................................................................................

1.00

0.00

1.00

......................................ATTTTTAGTAGAGACCGGGTTTCACCTCGT......................................................................................................................................................................................

1.00

0.00

1.00

.......................................................................................................ATCTGTCCATCTTGGCCCCCA..............................................................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCATAG...............................................................................................

1.00

.........................................................................................................................CCCAAAGTGCTGGGATGACAGGTGTATAA....................................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCAATAA..............................................................................................

1.00

...........TGCCACCACGCCCGGCTAATTTCTC......................................................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................ACAGGTGTGAGCCACCGCGCCTGTCAG.....................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGTAA..................................................................................................

1.00

0.00

1.00

.....................................................CGGGTTTCACCATGTTGGCCAGGCTGTGA........................................................................................................................................................................

1.00

0.00

1.00

.....................................TATTTTTAGTAGAGACCGGGCTCC.............................................................................................................................................................................................

1.00

0.00

1.00

...........................................TAGTAGAGACCGGGTTTGCCC..........................................................................................................................................................................................

1.00

0.00

1.00

.................................................AGACCGGGTTTCACCATGTTGGCCAGGCTTGCC........................................................................................................................................................................

1.00

0.00

1.00

..............................................TAGAGACCGGGTTTCACCATGTTGGCCAGGAGG...........................................................................................................................................................................

1.00

0.00

1.00

.................................................................................................................................................................................TAGTTGTGTTGTTTGGT........................................................

1.00

0.00

1.00

..............................................TAGAGACCGGGTTTCACCATGCTAG...................................................................................................................................................................................

1.00

0.00

1.00

..........................................................................................................................................ACAGGTGTGAGCCACCGCGCCTGGAGAC....................................................................................

1.00

0.00

1.00

......................................ATTTTTAGTAGAGACCGGGTTTCACCATCC......................................................................................................................................................................................

1.00

0.00

1.00

...........................TAATTTTATGTATTTTTGGGC..........................................................................................................................................................................................................

1.00

0.00

1.00

...................................................................................................................................TGGGATGACAGGTGTGAGCCAGGG...............................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCAAA................................................................................................

1.00

..........................................................................................................................................ACAGGTGTGAGCCACCGCGCCTGGCCTTGCG.................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCAAAA...............................................................................................

1.00

...........TGCCACCACGCCCGGCTAACTCC........................................................................................................................................................................................................................

1.00

0.00

1.00

...............................................................................................................................................TGTGAGCCACCGCGCCTGGCCTTTGGG................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGTATC.................................................................................................

1.00

0.00

1.00

..................................................................................................................................CTGGGATGACAGGTGTGAGCCATAT...............................................................................................

1.00

...................................................................................................................................TGGGATGACAGGTGTGAGAAAA.................................................................................................

1.00

0.00

1.00

0.50

ATAGGTGTGCATGCCACCACGCCCGGCTAATTTTATGTATTTTTAGTAGAGACCGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGTCCATCTTGGCCTCCCAAAGTGCTGGGATGACAGGTGTGAGCCACCGCGCCTGGCCTTGTACATACCTTTAGTTGTGTTGTTTGTCTTCCAGCTTTTCAGAAGAGCTGGTAGATGAAGCTCTGGGTGCTGTGGCTGCTGAAC ................................................((((((((.((...((.....))..)).)))))))).....((((....))))..((((((.(((((..((((.....)).))..)))))))))))(((......))).............................................................................................. ............................................45...............................................................................................................158..........................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR060169(GSM565979) 5-8F_cytoplasm. (cell line)	SRR039625(GSM531988) HBV(-) HCV(-) HCC Tissue Sample. (liver)	SRR094130(GSM651906) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	SRR033716(GSM497061) Mentle Cell Lymphoma (MCL114). (B cell)	SRR038861(GSM458544) MM466. (cell line)	SRR390723(GSM850202) total small RNA. (cell line)	SRR060986(GSM569190) Human memory B cell [09-001]. (cell line)	RoviraIPAgo2(Rovira) total RNA. (ago2 breast)	SRR029054(GSM402329) MCF7_smallRNAseq. (cell line)	SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus)	SRR207117(GSM721079) Whole cell RNA. (cell line)	SRR107297(GSM677704) 18-30nt fraction of small RNA. (cell line)	DRR000562(DRX000320) Isolation of RNA following immunoprecipitatio. (ago3 cell line)	SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart)	SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood)	GSM532929(GSM532929) G702N. (cervix)	DRR000556(DRX000314) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	GSM450609(GSM450609) miRNA sequencing raw reads from post-mortem s. (brain)	SRR040036(GSM532921) G243N. (cervix)	SRR330923(SRX091761) tissue: normal skindisease state: normal. (skin)	SRR189782	SRR037937(GSM510475) 293cand2. (cell line)	SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line)	SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line)	SRR015447(SRR015447) nuclear small RNAs. (breast)	DRR000559(DRX000317) "THP-1 whole cell RNA, no treatment". (cell line)	SRR330868(SRX091706) tissue: skin psoriatic involveddisease state:. (skin)	SRR553576(SRX182782) source: Testis. (testes)	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	GSM450602(GSM450602) miRNA sequencing raw reads from post-mortem s. (brain)	GSM450599(GSM450599) miRNA sequencing raw reads from post-mortem s. (brain)	GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR330866(SRX091704) tissue: skin psoriatic involveddisease state:. (skin)	SRR191632(GSM715742) 78genomic small RNA (size selected RNA from t. (breast)	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR326281(GSM769511) "Dicer mRNA was knocked down using siDicer, c. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)
........GCATGCCACCACGCCCGGCTCTCC..........................................................................................................................................................................................................................	24		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTGTCC.....................................................................................................................................................	27		2.00	0.00	1.00	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTGCCC.....................................................................................................................................................	27		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........GCATGCCACCACGCCCGGCTAATGTG........................................................................................................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................GTCTCAAACTCCTGACCTCAGGACGA.................................................................................................................................................	26		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GTGCATGCCACCACGCCCGGCTTTGA..........................................................................................................................................................................................................................	26		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................GGTGTGAGCCACCGCGCCTGGGC......................................................................................	23		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................CTCCTGACCTCAGGTGATCTGTCCC..........................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................................................................TCTGTCCATCTTGGCAGCA...............................................................................................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-
........GCATGCCACCACGCCCGGCTGCTG..........................................................................................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........GCATGCCACCACGCCCGGCTAAGCGC........................................................................................................................................................................................................................	26		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTCGGTC....................................................................................................................................................	28		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTCAGTCC...................................................................................................................................................	29		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........GCATGCCACCACGCCCGGCTAACTC.........................................................................................................................................................................................................................	25		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......GCGTGGTGGCATGCAC....................................................................................................................................................................................................................................	16	0	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTGGTC.....................................................................................................................................................	27		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............CCACCACGCCCGGCTAATAAGT.......................................................................................................................................................................................................................	22		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................TTTTAGTAGAGACCGGGTTTCACCATGTTGCAC.................................................................................................................................................................................	33		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................................................................................GTCTTCCAGCTTTTCAGATG.......................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGACCTCAGGTGGTC................................................................................................................................................	32		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................................GGCTGGTCTCAAACTCCTGAGCCC........................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........CATGCCACCACGCCCGGCAAA............................................................................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................ATGGTGAAACCCGGTCTCTA........................................................................................................................................................................................	20	0	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
......................................................................................ACTCCTGACCTCAGGTGATCTGTCCATCTG......................................................................................................................................	30		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................................................................ACAAGGCCAGGCGCGGTGGCTCACACCTG..................................................................................	29	7	0.14	0.14	0.14	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-