ID: uc010vqn.1_intron_2_0_chr17_1461854_r.5p
GENE: PITPNA(1)
chr17:1462850-1463099-


(1)
AGO2.ip
(2)
BREAST
(5)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
LIVER
(1)
OTHER
(4)
SKIN
(1)
TESTES

Sense strand
GCCCATTTTGTTTTTCCTGCTACTTTCCTGCTTGGTGTCTTGCCTTTGAGGTGATGTTTTCCTCAGACCCCTCTGTGTCCTTCTTGCTTCCTGGGGGACCTTTGTGGAACTAGAAAATAGCTGTTTACTAGCCTGGAGCAAGGAGCCTGAGTGGTGAGCCGGCTGCATAAGGAAGGCACAGCAGCTCATGCTTCCCTAATGCTTCACTAAACATGCAAGACACAAAAGGACCCAGAGGGCTCCAGCAAGG
...................................................................................................(((((.((..((((.((((....)))).)))))))))))...(((((.((((((.((.(((..((......))..))).)).)).)))).)))))........................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189787SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
..................................................................................................................................................................................CAGCAGCTCATGCTTTGAA.....................................................1928.000.0022.006.00-------------------
..................................................................................................................................................................................CAGCAGCTCATGCTTTGA......................................................1822.000.0014.008.00-------------------
........................................................................................................................................................................AAGGAAGGCACAGCAGCTCATGCCCCT.......................................................272.000.00--2.00------------------
..............................................................................................................................................................CCGGCTGCATAAGGAAGGCA........................................................................2011.001.00----1.00----------------
..........................................................................................................................................................................................................................GACACAAAAGGACCCAGAGG............2011.001.00-------1.00-------------
............................................................................................................................................................................AAGGCACAGCAGCTCATGCTCCCC......................................................241.000.00--1.00------------------
......................................................................................................TGTGGAACTAGAAAATACTGA...............................................................................................................................211.000.00----------1.00----------
.....TTTTGTTTTTCCTGCCAGG..................................................................................................................................................................................................................................191.000.00--------------1.00------
..........................................................................................CTGGGGGACCTTTGTGGAAC............................................................................................................................................2011.001.00---------------1.00-----
......................................................................................................TGTGGAACTAGAAAATCTC.................................................................................................................................191.000.00---1.00-----------------
........................................................................................................TGGAACTAGAAAATAGCTG...............................................................................................................................1911.001.00----1.00----------------
................................................................................................................................................................GGCTGCATAAGGAAGGCACA......................................................................2011.001.00-------------------1.00-
..CCATTTTGTTTTTCCTGCTTCTA.................................................................................................................................................................................................................................231.000.00---1.00-----------------
............TTTCCTGCTACTTTCCTGCTTGGTG.....................................................................................................................................................................................................................2511.001.00--1.00------------------
..CCATTTTGTTTTTCCTGCTGCTA.................................................................................................................................................................................................................................231.000.00---1.00-----------------
.....................................................................................................TTGTGGAACTAGAAAATAGCTGTTTACT.........................................................................................................................2811.001.00------------1.00--------
..................................................................................................................................................................................CAGCAGCTCATGCTTTGG......................................................181.000.001.00--------------------
.............................................................................................................................................GGAGCCTGAGTGGTGAGCCGGCTGG....................................................................................251.000.00------1.00--------------
.....................................................................................................TTGTGGAACTAGAAAATAGC.................................................................................................................................2011.001.00--------1.00------------
........................................................................................................TGGAACTAGAAAATAGCTGTTTACTAGCC.....................................................................................................................2911.001.00-----------------1.00---
............................................................................................GGGGGACCTTTGTGGA..............................................................................................................................................1611.001.00-----1.00---------------
...............................................................................................................................................................................................................................AAAAGGACCCAGAGGGC..........1720.500.50--------------------0.50

Antisense strand
GCCCATTTTGTTTTTCCTGCTACTTTCCTGCTTGGTGTCTTGCCTTTGAGGTGATGTTTTCCTCAGACCCCTCTGTGTCCTTCTTGCTTCCTGGGGGACCTTTGTGGAACTAGAAAATAGCTGTTTACTAGCCTGGAGCAAGGAGCCTGAGTGGTGAGCCGGCTGCATAAGGAAGGCACAGCAGCTCATGCTTCCCTAATGCTTCACTAAACATGCAAGACACAAAAGGACCCAGAGGGCTCCAGCAAGG
...................................................................................................(((((.((..((((.((((....)))).)))))))))))...(((((.((((((.((.(((..((......))..))).)).)).)))).)))))........................................................
.................................................................................................98....................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189786SRR189787SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189784SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR189782TAX577740(Rovira)
total RNA. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR038858(GSM458541)
MEL202. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
............................................TTTGAGGTGATGTTTTATG........................................................................................................................................................................................... 191.000.00------------------1.00--
...............................................................................CTTCTTGCTTCCTGGAACC........................................................................................................................................................ 191.000.00---------1.00-----------
.........................................................TTTCCTCAGACCCCTGTTG.............................................................................................................................................................................. 191.000.00-----------1.00---------
.............................................TTGAGGTGATGTTTTGC............................................................................................................................................................................................ 171.000.00----------------1.00----
........................................................TTTTCCTCAGACCCCTAAA............................................................................................................................................................................... 191.000.00-------------1.00-------