ID: uc010vqc.1_intron_8_0_chr17_685284_r
GENE: (1)
chr17:685234-685455-


(1)
AGO1.ip 		(11)
B-CELL 		(6)
BRAIN 		(26)
BREAST 		(29)
CELL-LINE 		(26)
CERVIX 		(2)
FIBROBLAST 		(7)
HEART 		(2)
HELA 		(5)
LIVER 		(2)
OTHER 		(1)
RRP40.ip 		(35)
SKIN 		(1)
TESTES 		(1)
XRN.ip

Sense strand
GAAACCGCTTCCAGACGGCGCGTTTCTATCGGGACGTCCTGGGGATGAAGGTGCAGGCCGGGGCCGACAGGGGCTGGCGCGCGAGGCTGGAACCGGCGCCCGAGCCGGCCCTGGCGGAGGGAGGGGAAAATGGGTGTGTCGTGAACCTAAGCCGGAGGGTGTCCGACCTTAGGCCCTGCGCGGTGTTCAGCTTCAGGAGCGTGGCGAGTTGCCGTTGGGGAT
...................................................................................................((...((((((((......))).........(((((.........))))).))))).))................................................................
...................................................................................................100.........................................................159.............................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532885(GSM532885)
G850N. (cervix)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040041(GSM532926)
G612T. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		GSM532872(GSM532872)
G652T. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532878(GSM532878)
G691T. (cervix)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040012(GSM532897)
G648N. (cervix)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)
........................................................................................................CCGGCCCTGGCGGAGCGC....................................................................................................181947.00165.0042.0092.00317.0096.00102.002.0044.0029.0036.0020.0025.0018.0016.0016.0012.004.001.00-1.007.003.006.003.001.003.001.005.003.004.00--1.00-1.00----1.001.00-1.001.00---2.001.001.001.00--2.002.00----1.00---1.00---1.001.00---1.00---1.00------1.00----1.00----1.00---------1.00----1.00------1.001.00-----1.00-1.001.001.001.00---1.001.00-------1.00---1.00-1.00--------
.........................................................................................................CGGCCCTGGCGGAGGGC....................................................................................................171461.00157.00-314.00-114.00---2.00-------3.0010.00-------------1.004.00---3.002.00--------------2.00--------1.00-------1.00--1.00------------------------------------------------1.00----------------1.00------1.00---------
........................................................................................................CCGGCCCTGGCGGAGT......................................................................................................161337.00165.00302.00----29.00--------------1.00-----------2.00-1.00--1.00--------------------------------------------------------------------------------------------------1.00-----------------
........................................................................................................CCGGCCCTGGCGGAGCGCT...................................................................................................191272.00165.0040.00-176.00-33.001.00-3.001.001.00-3.002.00---------1.00-----------------1.00---------2.00-------1.00----------------------------------1.001.00-------------1.001.00-1.00-----1.00----1.00-------------------------------
........................................................................................................CCGGCCCTGGCGGAGC......................................................................................................161200.00165.00158.001.00---9.00-1.00---------7.00--3.00----2.00------2.003.001.00---1.00-1.00--2.00-------------1.00-----1.00---------1.00-------1.00--1.00---------------1.00---------------1.00------------------------1.001.00-----------
........................................................................................................CCGGCCCTGGCGGAG.......................................................................................................151165.00165.00117.00----39.00-----------1.00-------1.00-----------2.00--1.00----1.00-1.00-----------2.00----------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGG.....................................................................................................161157.00157.00-106.00-48.00-----------3.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCG.....................................................................................................171108.00165.0030.0027.00-19.00---6.00-------1.00-2.001.00--------3.00-------1.00-----2.00-1.003.00---1.00-----------1.00--1.00--1.001.00-1.00----1.00----------1.00--------------------1.00------------1.00-------------1.00-------------1.00------
.........................................................................................................CGGCCCTGGCGGAGGGG....................................................................................................17148.00157.00-29.00-18.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGA....................................................................................................17141.0041.00-27.00-13.00----------------------------------------------------------------1.00-------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGTT.....................................................................................................17127.00165.0026.00-------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGCA...................................................................................................19122.00165.00--8.002.00-----5.00--1.001.00--------2.00-1.00-----1.00----------------------------------------------------------------------------------1.00----------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGT....................................................................................................18120.00165.00--8.00------2.00-2.00-------1.00-1.002.00--------------------------1.00--------------------2.00------------------1.00----------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGT....................................................................................................17112.00157.00-6.00-3.00---1.00-------2.00------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GCCGGCCCTGGCGGAGCGC....................................................................................................19111.001.00-1.00----1.00------1.00---------4.00-----3.00-----------------------------------------------------1.00----------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGAGC....................................................................................................1818.00165.00--1.00---1.00-1.00-----1.00-----------1.00-1.00----------1.00--1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGG......................................................................................................1547.507.50-1.00-0.25-2.75---------------------------0.75---0.75-------------------------------------------------------------------1.00------------------------------------------0.250.25-0.25-0.25
........................................................................................................CCGGCCCTGGCGGAGCGG....................................................................................................1815.00165.00-1.001.00---------------------------1.00--------1.00--1.00---------------------------------------------------------------------------------------------------------------
..............................................GAAGGTGCAGGCCGGCG...............................................................................................................................................................175.000.00------------------4.00-------------------------------------------------------------------------------------1.00-------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGTT...................................................................................................1915.00165.00--4.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCTGG.................................................................................................2014.00157.00-2.00-1.00-----------------------------------------------------------------1.00------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGA....................................................................................................1814.00165.00-1.002.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCT...................................................................................................1814.00157.00--------------------------------------------------------1.00---------------------------------------1.00----1.00---------------------------1.00------------------------
..............................................GAAGGTGCAGGCCGGCGC..............................................................................................................................................................184.000.00------------------1.00-------------------------------------------1.00-----------------------------------------------------------------1.00-----1.00-------------------
.......................................................................................................GCCGGCCCTGGCGGAGCG.....................................................................................................1814.001.00-------------1.00---------------2.00------1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGGGC....................................................................................................1814.001.00-2.00-2.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGCC...................................................................................................1913.00165.00----1.00---------1.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................GCCGGCCCTGGCGGAGC......................................................................................................1713.001.00---------------------------------------------1.00-----------1.00--------------1.00---------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCTGA.................................................................................................2013.00157.00--------------------------------------------------------1.00-------2.00-----------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCTC....................................................................................................1813.00165.00-1.00-1.00---1.00--------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCACT...................................................................................................1912.00165.00--1.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGTA...................................................................................................1812.00157.00------------------------------------------------------2.00---------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGGGCG.................................................................................................2012.00157.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCAC....................................................................................................1812.00165.00--2.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................GTCGTGAACCTAAGCCGG...................................................................1812.002.00-------------------------------------------------------2.00--------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGG......................................................................................................1612.002.001.00----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGAA...................................................................................................1912.00165.00--1.00------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCA...................................................................................................1812.00157.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGAG.....................................................................................................1712.00165.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...ACCGCTTCCAGACGGCGCGC.......................................................................................................................................................................................................202.000.00-------------------------------------------------------------2.00--------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCCC....................................................................................................1812.00165.00------------2.00---------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCCGG.................................................................................................2012.00157.00-1.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGAGG....................................................................................................1812.00165.00-2.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........................ATCGGGACGTCCTGGGGA.................................................................................................................................................................................1812.002.00-----------------------2.00----------------------------------------------------------------------------------------------------------------------------------
............................................ATGAAGGTGCAGGCCGGC................................................................................................................................................................1812.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------1.00-------
........................................................................................................CCGGCCCTGGCGGAGA......................................................................................................1612.00165.002.00---------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................GCCGGCCCTGGCGGA........................................................................................................1511.001.00-------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
............................TCGGGACGTCCTGGGGATGAAGG...........................................................................................................................................................................2311.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
........................................................................................................CCGGCCCTGGCGGAGGG.....................................................................................................1711.001.00----------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
.........................................................CCGGGGCCGACAGGGCG....................................................................................................................................................171.000.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGGGG....................................................................................................1811.001.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..................................CGTCCTGGGGATGAAGG...........................................................................................................................................................................1711.001.00---------------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGAGCC...................................................................................................1911.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCG...................................................................................................1811.00157.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............................TCGGGACGTCCTGGGGACG...............................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................GCCGGCCCTGGCGGAGAG.....................................................................................................1811.001.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCCT....................................................................................................1811.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................AGGCTGGAACCGGCGCCCG........................................................................................................................1911.001.00-----------------------------------------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGTC...................................................................................................1911.00165.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................AGGGGCTGGCGCGCGAAT........................................................................................................................................181.000.00--------------------------------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................GGGAAAATGGGTGTGTTGTT...............................................................................201.000.00------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGGCGG.................................................................................................2011.00157.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGTACT...................................................................................................1911.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGGCCG.................................................................................................2011.00157.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGCGG..................................................................................................1911.00157.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................GGCGGAGGGAGGGGAATTC...........................................................................................191.000.00-------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
............................................................................................................................................................................................AGCTTCAGGAGCGTGGCGAG..............2011.001.00------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
.............................................................................CGCGCGAGGCTGGAACCGGCGC...........................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCCG....................................................................................................1811.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
..............................GGGACGTCCTGGGGATGAA.............................................................................................................................................................................1911.001.00------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGGGA...................................................................................................1811.00157.00---1.00------------------------------------------------------------------------------------------------------------------------------------------------------
................................GACGTCCTGGGGATGAAGGT..........................................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00------------------
..............................................................................................................................................................................................CTTCAGGAGCGTGGCGAG..............1811.001.00----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GGTGTTCAGCTTCAGGAGCGTG...................2211.001.00--------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGGGCT...................................................................................................1911.001.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................ATGAAGGTGCAGGCCGGCGCG.............................................................................................................................................................2111.001.00-------------------------------------------------------------------------------------------------------1.00--------------------------------------------------
.......................................................................................................GCCGGCCCTGGCGGAG.......................................................................................................1611.001.00--------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
.............................................TGAAGGTGCAGGCCGGCG...............................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................CGGAGGGTGTCCGACCTTAGGC................................................2211.001.00-------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGGGA....................................................................................................1811.001.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................AGGAGCGTGGCGAGTGTT..........181.000.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCGCG...................................................................................................1911.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
............................................ATGAAGGTGCAGGCCGG.................................................................................................................................................................1711.001.00------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................................GCGCGAGGCTGGAACCGG..............................................................................................................................1811.001.00----------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGCA.....................................................................................................1711.00165.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...........................ATCGGGACGTCCTGGGGATGAAG............................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------------1.00-----------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGAGCG...................................................................................................1911.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................CCGGCCCTGGCGGAGTGC....................................................................................................1811.00165.00--1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................GGGGATGAAGGTGCAGGC....................................................................................................................................................................1811.001.00-----------------------------------------------------------------1.00----------------------------------------------------------------------------------------
...............................................................................CGCGAGGCTGGAACCGGCGCC..........................................................................................................................2111.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................GTGTGTCGTGAACCTAAG.......................................................................1811.001.00--------------------------------------------------------------------------------------------------------------------------------------------1.00-------------
........................................................................................................CCGGCCCTGGCGGAGAGCT...................................................................................................1911.00165.00----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................GCCCTGGCGGAGGGAGG..................................................................................................1711.001.00-------------------------------------------------------------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................CGTGAACCTAAGCCGGAGGG...............................................................2011.001.00--------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
.............................CGGGACGTCCTGGGGATGAAGGTT.........................................................................................................................................................................241.000.00-----1.00----------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGTC....................................................................................................1740.757.50-0.25-0.25---0.25--------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGCC....................................................................................................1740.757.50-0.50-0.25------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGT.....................................................................................................1640.507.50-0.25-0.25------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGCTGA..................................................................................................1940.507.50------------0.25-----------------------------------------------------------------------------------------------------------------------------------------0.25---
..................................................................................GAGGCTGGAACCGGCG............................................................................................................................1620.500.50------------------------------0.50---------------------------------------------------------------------------------------------------------------------------
...............................................................................CGCGAGGCTGGAACC................................................................................................................................1520.500.50-----0.50----------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................CTGGCGGAGGGAGGGG................................................................................................1630.330.33----------------------------------0.33-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................GGCCCTGGCGGAGGG.....................................................................................................1570.290.29-0.14-------------------------------------------0.14------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGA.....................................................................................................1640.257.50-0.25--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGAC....................................................................................................1740.257.50---0.25------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGCCGG..................................................................................................1940.257.50-0.25--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGAGC...................................................................................................1840.257.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.25-
.........................................................................................................CGGCCCTGGCGGAGGCTTT..................................................................................................1940.257.50--------------------------------------------------------------------------0.25-------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGTCGG..................................................................................................1940.257.50----------------------------------------------------------------------------------------------------------------------------------------------------0.25-----
.........................................................................................................CGGCCCTGGCGGAGGATCA..................................................................................................1940.257.50-------------------------------------------------------------------------0.25--------------------------------------------------------------------------------
.........................................................................................................CGGCCCTGGCGGAGGCGGC..................................................................................................1940.257.50------------------------------------------------------------------------0.25---------------------------------------------------------------------------------
...........................................................................................................GCCCTGGCGGAGGGA....................................................................................................1560.170.17-0.17--------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GAAACCGCTTCCAGACGGCGCGTTTCTATCGGGACGTCCTGGGGATGAAGGTGCAGGCCGGGGCCGACAGGGGCTGGCGCGCGAGGCTGGAACCGGCGCCCGAGCCGGCCCTGGCGGAGGGAGGGGAAAATGGGTGTGTCGTGAACCTAAGCCGGAGGGTGTCCGACCTTAGGCCCTGCGCGGTGTTCAGCTTCAGGAGCGTGGCGAGTTGCCGTTGGGGAT
...................................................................................................((...((((((((......))).........(((((.........))))).))))).))................................................................
...................................................................................................100.........................................................159.............................................................
SizePerfect hitTotal NormPerfect NormSRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR040037(GSM532922)
G243T. (cervix)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR040039(GSM532924)
G531T. (cervix)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR040035(GSM532920)
G001T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR040034(GSM532919)
G001N. (cervix)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM532886(GSM532886)
G850T. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR040036(GSM532921)
G243N. (cervix)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037943(GSM510481)
293DcrTN. (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR040031(GSM532916)
G013T. (cervix)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		GSM532880(GSM532880)
G659T. (cervix)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		GSM532876(GSM532876)
G547T. (cervix)		GSM532890(GSM532890)
G576T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		GSM416733(GSM416733)
HEK293. (cell line)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR037931(GSM510469)
293GFP. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532885(GSM532885)
G850N. (cervix)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040041(GSM532926)
G612T. (cervix)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		GSM532877(GSM532877)
G691N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR040028(GSM532913)
G026N. (cervix)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577590(Rovira)
total RNA. (breast)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577744(Rovira)
total RNA. (breast)		SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577743(Rovira)
total RNA. (breast)		SRR040015(GSM532900)
G623T. (cervix)		GSM532872(GSM532872)
G652T. (cervix)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040018(GSM532903)
G701N. (cervix)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532878(GSM532878)
G691T. (cervix)		SRR037936(GSM510474)
293cand1. (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577588(Rovira)
total RNA. (breast)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040021(GSM532906)
G761T_2. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR029129(GSM416758)
SW480. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577741(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR038861(GSM458544)
MM466. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)		TAX577742(Rovira)
total RNA. (breast)		SRR191547(GSM715657)
155genomic small RNA (size selected RNA from . (breast)		SRR015448(SRR015448)
cytoplasmic small RNAs. (breast)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR040038(GSM532923)
G531N. (cervix)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR015365(GSM380330)
Memory B cells (MM139). (B cell)		SRR040012(GSM532897)
G648N. (cervix)		SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)		SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR040024(GSM532909)
G613N. (cervix)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)		SRR191527(GSM715637)
128genomic small RNA (size selected RNA from . (breast)		TAX577745(Rovira)
total RNA. (breast)		SRR191596(GSM715706)
73genomic small RNA (size selected RNA from t. (breast)		SRR040027(GSM532912)
G220T. (cervix)		SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553576(SRX182782)
source: Testis. (testes)
.............................................................................................................................................................................GCTGAACACCGCGCAGGG............................... 1811.001.00------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CAACTCGCCACGCTCCTGAAGCTG........... 2411.001.00------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
............................................................................................................................................CGGACACCCTCCGGCTTAGGTTCAC......................................................... 2511.001.00---------------------------------------------------------------------------------------------------1.00------------------------------------------------------
..........................................................................................................................................TCCGGCTTAGGTTCACGA.................................................................. 1811.001.00-----------------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTGCAGGCCGGGGCCTCTA......................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------1.00----------------------------------------------------------