ID: uc010vff.1_intron_10_0_chr16_31160034_r
GENE: (2)
chr16:31159984-31160443-


(1)
AGO2.ip
(2)
B-CELL
(2)
BRAIN
(29)
BREAST
(16)
CELL-LINE
(17)
CERVIX
(6)
HEART
(3)
LIVER
(3)
OTHER
(63)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
TCCCTCATCGCCCCCTCCTGGGTCCTCTCCGCTGCTCACTGTTTCATGACGTGAGTATTCGCCCTGGTCCTGGCCCCTCTCCGCCAAAAGCTGGCCCCCGCCCCCGCAGTTGGTCCCCTCCTCCCGCCCCACTTCCGTCCTCAAGGATAATTTGGAGCCAAGCTGTCCCCAAAGCGAGGTGCTATTCGAGGCATCATGGTTCCGAGTGGGGCAAGGCTGCCGGACTGGTCCCACCACTCCACTCAATATCCGGGTCTGAATCCCATCTTTCCAATGACCCCCCCACCACCAGCTCCAAATCGGATTTGCTCTTCCCCTTTGAGGAGTATCAGCACCAAATCTGGATCGGATAGCACCTGCCCCTCTGGCTCTGAGCCCCTGCCCCCAACGAGGGTCTGCCCCCTCCATAGGGTCAACCTAACCTCCTACTGCCCCGGTCGAGCGCAGGAATGGGACGCTG
..................................................(((.......(((........)))........(((((..((.(((....)))...))..)))))...............)))....((((....))))........................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150....................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040012(GSM532897)
G648N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040032(GSM532917)
G603N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
.................................................................................................................TCCCCTCCTCCCGCCCACGC.......................................................................................................................................................................................................................................................................................................................................20305.000.0023.0011.009.0010.0010.009.009.007.007.007.006.005.007.00-6.006.006.006.005.007.005.005.005.003.004.005.006.005.005.001.004.00-3.001.002.002.003.003.002.002.002.001.003.002.002.004.003.001.003.00-1.003.00-2.001.001.002.00-3.003.002.00---2.001.002.002.002.002.001.002.00-1.002.00--1.00-1.001.00-1.00--1.00------1.001.00--1.00-1.00---1.001.001.00-1.00-1.00-1.00---1.00--1.001.00-1.001.00-1.001.001.00--1.00---1.00--1.00-1.00--------
.................................................................................................................TCCCCTCCTCCCGCCCACG........................................................................................................................................................................................................................................................................................................................................1991.000.00-3.003.002.001.001.001.003.002.001.002.003.002.00-2.001.002.001.002.00-2.001.00-3.002.001.00---4.00--1.003.001.00-1.001.002.00-2.002.001.002.00---1.00--2.00---2.001.00-2.00---1.001.00-------1.00-2.001.00-1.002.00------------1.00-1.00-----1.00-1.00---------1.00--1.00---------1.00---1.00---1.001.00-1.001.00-1.00---------
..................................................................................................................CCCCTCCTCCCGCCCCCGCC......................................................................................................................................................................................................................................................................................................................................209.000.00--------------------------------------------2.00--1.00-------1.001.00------2.00--------------1.00---------------1.00---------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACTC.......................................................................................................................................................................................................................................................................................................................................1909.004.00-5.002.00------------------------------------1.00------------------------------------------------------------1.00---------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACAC.......................................................................................................................................................................................................................................................................................................................................1906.004.00-----1.00--1.00-1.00----1.00------------------------------1.00-------------------------------------------1.00-------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACGT.......................................................................................................................................................................................................................................................................................................................................1905.004.00---------1.00--------------------1.00--------1.00-------------1.00------1.00-------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCC...........................................................................................................................................................................................................................................................................................................................................1504.004.00-------------------------------4.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................AGTATCAGCACCAAATGCA.....................................................................................................................193.000.00----------------------------------------------------3.00---------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCCCGCC......................................................................................................................................................................................................................................................................................................................................2191.000.11-----------0.11---------------------0.110.11------------0.11--------------0.110.11--------------0.110.11-----------------------------------------------------------------0.11
..................................................................................................................CCCCTCCTCCCGCCCACGG.......................................................................................................................................................................................................................................................................................................................................1901.004.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------------
................................................................................CCGCCAAAAGCTGGCCCCCGCCCC....................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCCGGC.......................................................................................................................................................................................................................................................................................................................................191.000.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCC............................................................................................................................................................................................................................................................................................................................................1501.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCACT........................................................................................................................................................................................................................................................................................................................................191.000.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCCCACC......................................................................................................................................................................................................................................................................................................................................201.000.00----------------------------------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................AATGACCCCCCCACCTCGG.........................................................................................................................................................................191.000.00---------------------------------------------------------------------------1.00----------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACAT.......................................................................................................................................................................................................................................................................................................................................1901.004.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACGA.......................................................................................................................................................................................................................................................................................................................................1901.004.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACT........................................................................................................................................................................................................................................................................................................................................1801.004.00---------------------------------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCTCGC.......................................................................................................................................................................................................................................................................................................................................201.000.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................TATCAGCACCAAATCAAAA...................................................................................................................191.000.00---------------------------------------------------------------------------------------------------------1.00----------------------------------------
.......................................................................................................................................................................................................TTCCGAGTGGGGCAAC.....................................................................................................................................................................................................................................................161.000.00-----------------------------------------------------------------------------------------------------------1.00--------------------------------------
.........................................................................CCCCTCTCCGCCAAAAGCTCAT.............................................................................................................................................................................................................................................................................................................................................................................221.000.00---------------------------------------------------------------------------------------------------------------------------------1.00----------------
..................................................................................................................CCCCTCCTCCCGCCCACAG.......................................................................................................................................................................................................................................................................................................................................1901.004.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................ATGACCCCCCCACCACCAGA.......................................................................................................................................................................201.000.00----------------------------------------------------------------------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................ATGACCCCCCCACCATT..........................................................................................................................................................................171.000.00-------------------------------------------------------------------------------------------------------------------1.00------------------------------
......................................................................................................................................................................................................................................................................................................................................TATCAGCACCAAATCTTG....................................................................................................................181.000.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACA........................................................................................................................................................................................................................................................................................................................................1801.004.00---------------------------------------------------------------------------------1.00----------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCACAC.......................................................................................................................................................................................................................................................................................................................................201.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCCCGGA......................................................................................................................................................................................................................................................................................................................................201.000.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------------
..................................................................................................................CCCCTCCTCCCGCCCACCA.......................................................................................................................................................................................................................................................................................................................................1901.004.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................GTCCCCTCCTCCCGCCCACGC.......................................................................................................................................................................................................................................................................................................................................2130.670.33------------------------------0.33------------------------------------------------------------------------------------------------------------0.33------
................................................................................................................GTCCCCTCCTCCCGCCCAC.........................................................................................................................................................................................................................................................................................................................................1930.330.33--------------------------------------------------------------------------------------------------------------------------------------------0.33-----
................................................................................................................GTCCCCTCCTCCCGCCCT..........................................................................................................................................................................................................................................................................................................................................1830.330.33---------------------------------------------------------------------------------------------------------------------------------------------0.33----
.................................................................................................................TCCCCTCCTCCCGCCCCCGC.......................................................................................................................................................................................................................................................................................................................................2090.330.11------------------------------------------------0.11-------------------------------0.11---------------------------------------------------------------0.11-
................................................................TGGTCCTGGCCCCTCTCC..........................................................................................................................................................................................................................................................................................................................................................................................1830.330.33------------------------------------------------------------------------------------------------------------------------------------------0.33-------
................................................................................................................GTCCCCTCCTCCCGCCC...........................................................................................................................................................................................................................................................................................................................................1730.330.33---------------------------------0.33----------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCCGGG.......................................................................................................................................................................................................................................................................................................................................2090.220.11----------------------0.11------------------------0.11--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................GGTCTGCCCCCTCCA.....................................................1580.120.12----------0.12---------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCC..........................................................................................................................................................................................................................................................................................................................................1790.110.11---------------------------------------------------------------------------------0.11----------------------------------------------------------------

Antisense strand
TCCCTCATCGCCCCCTCCTGGGTCCTCTCCGCTGCTCACTGTTTCATGACGTGAGTATTCGCCCTGGTCCTGGCCCCTCTCCGCCAAAAGCTGGCCCCCGCCCCCGCAGTTGGTCCCCTCCTCCCGCCCCACTTCCGTCCTCAAGGATAATTTGGAGCCAAGCTGTCCCCAAAGCGAGGTGCTATTCGAGGCATCATGGTTCCGAGTGGGGCAAGGCTGCCGGACTGGTCCCACCACTCCACTCAATATCCGGGTCTGAATCCCATCTTTCCAATGACCCCCCCACCACCAGCTCCAAATCGGATTTGCTCTTCCCCTTTGAGGAGTATCAGCACCAAATCTGGATCGGATAGCACCTGCCCCTCTGGCTCTGAGCCCCTGCCCCCAACGAGGGTCTGCCCCCTCCATAGGGTCAACCTAACCTCCTACTGCCCCGGTCGAGCGCAGGAATGGGACGCTG
..................................................(((.......(((........)))........(((((..((.(((....)))...))..)))))...............)))....((((....))))........................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150....................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR040012(GSM532897)
G648N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040032(GSM532917)
G603N. (cervix)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040008(GSM532893)
G727N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532884(GSM532884)
G871T. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040018(GSM532903)
G701N. (cervix)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)
SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
TAX577746(Rovira)
total RNA. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040011(GSM532896)
G529T. (cervix)
GSM532880(GSM532880)
G659T. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR189782SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM956925F181A(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR040014(GSM532899)
G623N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR038857(GSM458540)
D20. (cell line)
SRR191461(GSM715571)
35genomic small RNA (size selected RNA from t. (breast)
SRR189786SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040039(GSM532924)
G531T. (cervix)
SRR040038(GSM532923)
G531N. (cervix)
TAX577743(Rovira)
total RNA. (breast)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191474(GSM715584)
16genomic small RNA (size selected RNA from t. (breast)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
....................................................................................................................................................................................................................................................................................................................................AGTATCAGCACCAAAATC...................................................................................................................... 189.000.00-------------9.00------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................TCCCCTCCTCCCGCCCGGA........................................................................................................................................................................................................................................................................................................................................ 191.000.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................GTCTGAATCCCATCTTGT............................................................................................................................................................................................. 181.000.00-------------------------------------------------------------------------------------------------------------------------------1.00------------------
..........................................................................................................................CCCGCCCCACTTCCGCG................................................................................................................................................................................................................................................................................................................................. 171.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................AGCTGTCCCCAAAGCAGGA......................................................................................................................................................................................................................................................................................... 191.000.00--------------------------------------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................TTTGCTCTTCCCCTTTATTT........................................................................................................................................ 201.000.00-----------------------------------------------------------------------------------------------------1.00--------------------------------------------
...........................................................................................TGGCCCCCGCCCCCGCACAG............................................................................................................................................................................................................................................................................................................................................................. 201.000.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------
..............................................................................................................................CCCCACTTCCGTCCTCAAGA.......................................................................................................................................................................................................................................................................................................................... 201.000.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCCTACTGCCCCGG....................... 161.000.00-------------------------------------------------------------1.00------------------------------------------------------------------------------------
..............................................................................................................................CCCCACTTCCGTCCTAAAA........................................................................................................................................................................................................................................................................................................................... 191.000.00---------------------------------------------------------------------------------------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGACCGGGGCAGTAGGAGGTT.................. 2311.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................................................................................CCATCTTTCCAATGACATA................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------------
..............................................................CCTGGTCCTGGCCCCTCAA........................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------------
...........................................................................................................................................................................................................................................................................................CACCACCAGCTCCAACA................................................................................................................................................................ 171.000.00-----------------------------------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................CCCCCGCCCCCGCAGTGAC........................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................................................................................CCCCTCCTCCCGCCCCATGG...................................................................................................................................................................................................................................................................................................................................... 201.000.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................GGGGCAGGGGCTCAG........................................................................... 1501.001.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.............................................................CCCTGGTCCTGGCCCCTATA........................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................AGGGGCTCAGAGCCAGA................................................................................ 1740.250.25-----------------------------------------------------------------------------0.25--------------------------------------------------------------------
...............................................................................................................GCGGGAGGAGGGGACC............................................................................................................................................................................................................................................................................................................................................. 1640.250.25-------------------------------------------------------------0.25------------------------------------------------------------------------------------
.............................................................................................CTGCGGGGGCGGGGGC............................................................................................................................................................................................................................................................................................................................................................... 1680.120.12----------------------------------------------------------------------------------------------------------------------------------------------0.12---
.................................................................................................................GGGGCGGGAGGAGGGGA.......................................................................................................................................................................................................................................................................................................................................... 1790.110.11-----------------------------------------------------------------------------------------------------------------------------------------------0.11--