ID: uc010uxr.1_intron_2_0_chr16_4747418_r.3p
GENE: (3)
chr16:4747368-4747617-


(1)
AGO2.ip
(17)
B-CELL
(6)
BRAIN
(2)
BREAST
(6)
CELL-LINE
(1)
HEART
(1)
HELA
(1)
LIVER
(2)
OTHER
(1)
SKIN

Sense strand
CGTAGTGTTTGCTCAGCCTGTGGGAGGAAGGGCACAACAGGGCTTCCCTGCCTCGGCCTTGGGAGGTTGCTTAGACACTGTCAGGCGGGTAGGGAGGTTCTGATCCAAGCAGGTTCTCCTGGTTGCATGGGCTCAGAATAAAGCAGGGCCTGTGGGGACGCAGACCCCCAGCTAACTCGGTCCCTGCACCTGCACCACAGACTCCAAGGGCTGGCAAGCGTCCCTGCAGGCCATGAGCCTCCCCGAGCTC
...................................................(((.(((.(((.(((((.....))).)).)))))))))..(((..(((((((((((.(((((....)))....)).)))).)))))))..(((.(((.(((((....))))).)))...)))..)))........................................................................
..................................................51.................................................................................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
...................................................CTCGGCCTTGGGAGGCAA.....................................................................................................................................................................................1828.000.00--2.002.00--2.003.00--2.002.00-2.00-1.00--1.00--1.00-1.001.00-1.00-1.00-1.001.001.001.00-1.00--1.00
...................................................CTCGGCCTTGGGAGGCAAC....................................................................................................................................................................................1919.000.00--2.002.003.003.001.00-2.002.00--1.00--1.00---------1.00----------1.00--
...............................................................................................................................TGGGCTCAGAATAAAGCAGGGCCTGTGGGGACGCAGACCCCCAGCTAACTCGGTCCCTGCACCTGCAC.......................................................6819.009.00-9.00-------------------------------------
................................................................................................................................................................CAGACCCCCAGCTAAGGCC.......................................................................194.000.004.00--------------------------------------
...................................................CTCGGCCTTGGGAGGCA......................................................................................................................................................................................174.000.00--1.00--------------------------1.00----1.00--1.00-
.............................................................................................................................................AGCAGGGCCTGTGGGGACGCA........................................................................................2112.002.00----------------2.00----------------------
...........................................................................................................................................AAAGCAGGGCCTGTGGGGACGC.........................................................................................2212.002.00--------------2.00------------------------
.........................................................................................TAGGGAGGTTCTGATTAAC..............................................................................................................................................192.000.002.00--------------------------------------
.............................................................................CTGTCAGGCGGGTAG..............................................................................................................................................................1511.001.00---------------------------1.00-----------
.........................................................................................TAGGGAGGTTCTGATTCA...............................................................................................................................................181.000.001.00--------------------------------------
...................................................CTCGGCCTTGGGAGGCTAC....................................................................................................................................................................................191.000.00------------1.00--------------------------
........................................................................AGACACTGTCAGGCGTGC................................................................................................................................................................181.000.00-----------------1.00---------------------
..........................................................................ACACTGTCAGGCGGGGATT.............................................................................................................................................................191.000.00-------------------1.00-------------------
...................................................................................GGCGGGTAGGGAGGTAAA.....................................................................................................................................................181.000.001.00--------------------------------------

Antisense strand
CGTAGTGTTTGCTCAGCCTGTGGGAGGAAGGGCACAACAGGGCTTCCCTGCCTCGGCCTTGGGAGGTTGCTTAGACACTGTCAGGCGGGTAGGGAGGTTCTGATCCAAGCAGGTTCTCCTGGTTGCATGGGCTCAGAATAAAGCAGGGCCTGTGGGGACGCAGACCCCCAGCTAACTCGGTCCCTGCACCTGCACCACAGACTCCAAGGGCTGGCAAGCGTCCCTGCAGGCCATGAGCCTCCCCGAGCTC
...................................................(((.(((.(((.(((((.....))).)).)))))))))..(((..(((((((((((.(((((....)))....)).)))).)))))))..(((.(((.(((((....))))).)))...)))..)))........................................................................
..................................................51.................................................................................................................................182..................................................................
SizePerfect hitTotal NormPerfect NormSRR037937(GSM510475)
293cand2. (cell line)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR015361(GSM380326)
Memory B cells (MM55). (B cell)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR189782SRR015364(GSM380329)
Plasma B cells (PC44). (B cell)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
TAX577739(Rovira)
total RNA. (breast)
GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577579(Rovira)
total RNA. (breast)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
.............................................................................................................................................................................................CTGCACCACAGACTCTGG........................................... 181.000.001.00--------------------------------------
.......................................................GCCTTGGGAGGTTGCTCG................................................................................................................................................................................. 181.000.00--------------------1.00------------------
....................................................................GCTTAGACACTGTCAGATA................................................................................................................................................................... 191.000.00----------------------1.00----------------