ID: uc010use.1_intron_3_0_chr15_101814701_r
GENE: (4)
chr15:101814651-101814846-


(1)
AGO2.ip 		(1)
BREAST 		(5)
CELL-LINE 		(1)
FIBROBLAST 		(1)
HEART 		(6)
HELA 		(2)
LIVER 		(1)
OTHER 		(6)
SKIN 		(1)
TESTES

Sense strand
ACAGCATGCAAGAAGGAAAAAGTTACAAAGGAAATGCAAAGAAGCCCCAGGTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTGTGTTCAAACAGGAGGAAGACAGTCCTGGGCCTTCCACTTCATCTGTCCTGAAACGGAAATC
..................................................................(((....))).....((((.((((((..((....((((....))))...)).)))).))))))...................................................................
.................................................................66.............................................................129.................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTT......................................................................................60111.0011.0010.00-----------------------1.00-
........................................................................................................................TTACACTACTGTGTGTGTTCAAACAG..................................................2618.008.00--8.00-----------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGT...............................................................................677.000.007.00-------------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTTT............................................................8617.004.00-7.00------------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTA.........................................................................7315.005.00-5.00------------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTGTGTTCAAAC....................................................9415.005.00-5.00------------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTTTT..................................................................805.000.005.00-------------------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGT..............................................................8414.004.004.00-------------------------
..AGCATGCAAGAAGGAAAAAGTTACAAAGG.....................................................................................................................................................................2912.002.00---2.00----------------------
......................................................................GCTGGCATGCGGTAGATGAAGATA......................................................................................................241.000.00------1.00-------------------
.....................................................ACTGGAGACCTCGGCCGGCTG..........................................................................................................................2111.001.00-------------1.00------------
........CAAGAAGGAAAAAGTTACAAAGGAAATGCAAAGAA.........................................................................................................................................................3511.001.00-------1.00------------------
.........................................................................................................TGTTTTAATTGCTTCTATAT.......................................................................201.000.00----------------1.00---------
............................................CCCCAGGTGACTGGAGACCTCGGCC...............................................................................................................................2511.001.00--------------1.00-----------
..AGCATGCAAGAAGGAAAAAGTTACAAATG.....................................................................................................................................................................291.000.00---1.00----------------------
...........GAAGGAAAAAGTTACAAAGGAAATGCAAAGAAG........................................................................................................................................................3311.001.00---------------------1.00----
.....................................................................................ATGAAGATTGCCAAGTAGAATGTTTT.....................................................................................2611.001.00------1.00-------------------
.............AGGAAAAAGTTACAAAGGAAATG................................................................................................................................................................2311.001.00----------------------1.00---
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTGTGTTCAAACAG..................................................9611.001.001.00-------------------------
.............................................................................................................................................................................TCATCTGTCCTGAAACGGAAATC2311.001.00------------1.00-------------
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTGTGTTCAAACAGT.................................................9711.001.00-------------------1.00------
......................TTACAAAGGAAATGCTGTT...........................................................................................................................................................191.000.00-----------1.00--------------
..................................................................................TAGATGAAGATTGCCAAGTAGAATGTTTTAA...................................................................................3111.001.00-----------------------1.00--
..........................................................................GCATGCGGTAGATGAAGATTG.....................................................................................................2111.001.00---------1.00----------------
.............AGGAAAAAGTTACAAAGGAAATGCAAAGAAGC.......................................................................................................................................................3211.001.00--------------------1.00-----
..................................................GTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGA............................................................................................5411.001.001.00-------------------------
.............AGGAAAAAGTTACAAAGG.....................................................................................................................................................................1820.500.50---0.50----------------------
...............................................................................................CCAAGTAGAATGTTTT.....................................................................................1660.170.17-------------------------0.17

Antisense strand
ACAGCATGCAAGAAGGAAAAAGTTACAAAGGAAATGCAAAGAAGCCCCAGGTGACTGGAGACCTCGGCCGGCTGGCATGCGGTAGATGAAGATTGCCAAGTAGAATGTTTTAATTGCTTCTTACACTACTGTGTGTGTTCAAACAGGAGGAAGACAGTCCTGGGCCTTCCACTTCATCTGTCCTGAAACGGAAATC
..................................................................(((....))).....((((.((((((..((....((((....))))...)).)))).))))))...................................................................
.................................................................66.............................................................129.................................................................
SizePerfect hitTotal NormPerfect NormDRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR037938(GSM510476)
293Red. (cell line)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189784SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
....................................................GACTGGAGACCTCGGCG............................................................................................................................... 172.000.00----2.00---------------------
.................................................................................................................................................................GACAGATGAAGTGGAAGGCCC.............. 2112.002.00-----2.00--------------------
...............................................................................................CCAAGTAGAATGTTTGGA................................................................................... 181.000.00-----------------1.00--------
....................................................................................................................................................................CCTTCCACTTCATCTATA.............. 181.000.00----------1.00---------------
.............................................................................TGCGGTAGATGAAGAGAG..................................................................................................... 181.000.00--------1.00-----------------
............................................CCCCAGGTGACTGGAGT....................................................................................................................................... 171.000.00------------------1.00-------
.................................................GGTGACTGGAGACCTGAT................................................................................................................................. 181.000.00---------------1.00----------