ID: uc010uoh.1_intron_17_0_chr15_83348982_r
GENE: (8)
chr15:83348932-83349273-


(1)
B-CELL 		(2)
BRAIN 		(13)
BREAST 		(5)
CELL-LINE 		(18)
CERVIX 		(1)
HEART 		(2)
LIVER 		(4)
OTHER 		(26)
SKIN

Sense strand
GAAGTGGGCGTCATCGCCAAGGCGCTGGTGCGCCTGCTGCGCAGCCACAGGTGCGCTCCGCCCCCAGCCCCGCCCCCTCCCTCGCCTCCTGCCCCGCCCCACGGGCTGCCCGGCTCCGCCCCCTCACGCCCACCAGCCGCTTCCACCTCTGCCCACCCGCTCCACACTGACCGTAGTCCTGCCCTCCGCACTGGTCCTCTCCCCGCAACGACTTGCCCCACCTTTTCCCCTCATCCGCTGACCCTTGCCCCAACCGAGGGGCCCGGGGTGCTCTGACCCGTCCTCTCCGCAGTGAGGTGCAGTACGTTGTGCTCCAGAACGTGGCCACCATGTCCATCAAGC
.......................................................................................................(((((...(((.............)))...)))))......(((..(((......((.....((((....))))...)).....)))..))).........((((....))))..............(((...((...(((..(((((......)))))..)))..))..)))..................................................................
.......................................................................................................104..........................................................................................................................................................................277...............................................................
SizePerfect hitTotal NormPerfect NormSRR040012(GSM532897)
G648N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
............................................................................................................CCCGGCTCCGCCCCCCGGC.......................................................................................................................................................................................................................1947.000.007.004.004.002.003.00-1.001.001.002.002.003.002.00--2.00---1.001.001.00-----1.00-----1.00---1.00----1.00----1.001.00---------1.001.001.00---1.00-------
..............................................................................................................................................................................................................................................................CGAGGGGCCCGGGGTGGGG.....................................................................1911.000.00-------2.001.00-----2.00--2.00----2.00---1.00---------------------------1.00-----------------
..............................................................................................................................................................................................................................................................CGAGGGGCCCGGGGTGGG......................................................................188.000.00---2.00----1.00-------1.00----------------------------------1.00-1.00-1.001.00---------------
............................................................................................................CCCGGCTCCGCCCCCCGG........................................................................................................................................................................................................................187.000.001.001.00-------1.001.00----------1.00-------1.00--1.00---------------------------------------
............................................................................................................CCCGGCTCCGCCCCCCGCC.......................................................................................................................................................................................................................193.000.001.00-----1.00--------------------------------------------------1.00--------------
............................................................................................................CCCGGCTCCGCCCCCCCGC.......................................................................................................................................................................................................................192.000.00--1.00-----------------1.00---------------------------------------------------
............................................................................................................CCCGGCTCCGCCCCCTGGCC......................................................................................................................................................................................................................202.000.00------1.00------------------------------------------1.00----------------------
................................................................................................................................................................................................................................................................................................GCAGTGAGGTGCAGTGGTA...................................192.000.00-------------1.00--------------------------------------1.00-------------------
..............................................................................................................................................................................................................................................................CGAGGGGCCCGGGGTGG.......................................................................172.000.00-----------------------------------------1.00--------1.00---------------------
............................................................................................................CCCGGCTCCGCCCCCCGTC.......................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------------
.................................................................................................................................................................................................GTCCTCTCCCCGCAACCA...................................................................................................................................181.000.00-------------------------1.00----------------------------------------------
..............................................................CCCAGCCCCGCCCCCTCCCG....................................................................................................................................................................................................................................................................201.000.00-----1.00------------------------------------------------------------------
........................................................................................................GCTGCCCGGCTCCGCCCGCT..........................................................................................................................................................................................................................201.000.00----------------------------------1.00-------------------------------------
............................................................................................................CCCGGCTCCGCCCCCCGGA.......................................................................................................................................................................................................................191.000.00------------------------1.00-----------------------------------------------
..............................................................................................................................................................................................................................................................CGAGGGGCCCGGGGTGGGGT....................................................................201.000.00----------------------------1.00-------------------------------------------
................................................................................................................................................................................................................................................................AGGGGCCCGGGGTGCGGC....................................................................181.000.00------------------------------1.00-----------------------------------------
..................................................................................................................................CACCAGCCGCTTCCAAGAG.................................................................................................................................................................................................191.000.00--------------------------------------------------------------1.00---------
............................................................................................................................................................................................................................................................ACCGAGGGGCCCGGGGTCGTG.....................................................................211.000.00-----1.00------------------------------------------------------------------
............................................................................................................CCCGGCTCCGCCCCCCCG........................................................................................................................................................................................................................181.000.00----1.00-------------------------------------------------------------------
......................................................................................................................................................................................................................................TCATCCGCTGACCCTTGTAGG...........................................................................................211.000.00----------------------------------------1.00-------------------------------
............................................................................................................CCCGGCTCCGCCCCCCGGT.......................................................................................................................................................................................................................191.000.00------------------1.00-----------------------------------------------------
...........................................................................................................GCCCGGCTCCGCCCCCCGGC.......................................................................................................................................................................................................................201.000.00------------------1.00-----------------------------------------------------
..................................................................................................................................................................................................TCCTCTCCCCGCAACCA...................................................................................................................................171.000.00-----------------------------------1.00------------------------------------
..........................................................................CCCTCCCTCGCCTCCGTC..........................................................................................................................................................................................................................................................181.000.00-------------1.00----------------------------------------------------------
.........................................................CCGCCCCCAGCCCCGCCCCCT........................................................................................................................................................................................................................................................................2111.001.00---------------------------------------1.00--------------------------------
...........................................................................................................GCCCGGCTCCGCCCCCGGCG.......................................................................................................................................................................................................................201.000.00---------------------------------------------------------------1.00--------
............................................................................................................CCCGGCTCCGCCCCCTGG........................................................................................................................................................................................................................181.000.00----------------1.00-------------------------------------------------------
..............................................................................................................................................................................................................................................................CGAGGGGCCCGGGGT.........................................................................1511.001.00--------------------------------------------1.00---------------------------
.............................................................................................................................................................................................................................................................CCGAGGGGCCCGGGG..........................................................................1560.830.83-----------------------0.17--------------------------------------------0.330.33--
.............................................................................................................................................................................................................................................................CCGAGGGGCCCGGGGCGGG......................................................................1960.500.83-----------------------0.33----------------------------------------------0.17-
........CGTCATCGCCAAGGC...............................................................................................................................................................................................................................................................................................................................1520.500.50-----------------------------------------------------------------0.50------
....................................CTGCGCAGCCACAGG...................................................................................................................................................................................................................................................................................................1560.170.17-----------------------------------------------------------------------0.17

Antisense strand
GAAGTGGGCGTCATCGCCAAGGCGCTGGTGCGCCTGCTGCGCAGCCACAGGTGCGCTCCGCCCCCAGCCCCGCCCCCTCCCTCGCCTCCTGCCCCGCCCCACGGGCTGCCCGGCTCCGCCCCCTCACGCCCACCAGCCGCTTCCACCTCTGCCCACCCGCTCCACACTGACCGTAGTCCTGCCCTCCGCACTGGTCCTCTCCCCGCAACGACTTGCCCCACCTTTTCCCCTCATCCGCTGACCCTTGCCCCAACCGAGGGGCCCGGGGTGCTCTGACCCGTCCTCTCCGCAGTGAGGTGCAGTACGTTGTGCTCCAGAACGTGGCCACCATGTCCATCAAGC
.......................................................................................................(((((...(((.............)))...)))))......(((..(((......((.....((((....))))...)).....)))..))).........((((....))))..............(((...((...(((..(((((......)))))..)))..))..)))..................................................................
.......................................................................................................104..........................................................................................................................................................................277...............................................................
SizePerfect hitTotal NormPerfect NormSRR040012(GSM532897)
G648N. (cervix)		SRR040011(GSM532896)
G529T. (cervix)		TAX577741(Rovira)
total RNA. (breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR040032(GSM532917)
G603N. (cervix)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)		SRR040008(GSM532893)
G727N. (cervix)		TAX577589(Rovira)
total RNA. (breast)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040029(GSM532914)
G026T. (cervix)		SRR040028(GSM532913)
G026N. (cervix)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		TAX577744(Rovira)
total RNA. (breast)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR040034(GSM532919)
G001N. (cervix)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		TAX577746(Rovira)
total RNA. (breast)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR040037(GSM532922)
G243T. (cervix)		GSM532883(GSM532883)
G871N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR189782TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR189785SRR444048(SRX128896)
Sample 8cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)		TAX577739(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR029127(GSM416756)
A549. (cell line)		SRR040014(GSM532899)
G623N. (cervix)		SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532887(GSM532887)
G761N. (cervix)		SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)		SRR040024(GSM532909)
G613N. (cervix)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR343334GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
....................................................................................................................................................................................................................................................................................CCCGTCCTCTCCGCAGAA................................................ 181.000.00-------------------1.00----------------------------------------------------
.....................................................................................................................................................TGCCCACCCGCTCCACAACG............................................................................................................................................................................. 201.000.00-------------------------------------------1.00----------------------------
....................................................................................................................................................................................................................................................TTGCCCCAACCGAGGAAGC............................................................................... 191.000.00-------------------------------1.00----------------------------------------
..............................................................GGGGGCGGGGCTGGG......................................................................................................................................................................................................................................................................... 1501.001.00--------------------------------------1.00---------------------------------
.............................................................................................................................................................................................................................................................CCGAGGGGCCCGGGGAAC....................................................................... 1861.000.00-----------------------1.00------------------------------------------------
........................................GGAGCGCACCTGTGGCTGC........................................................................................................................................................................................................................................................................................... 1911.001.00---------------------------------------------1.00--------------------------
.....................................................CGCTCCGCCCCCAGCGTGC.............................................................................................................................................................................................................................................................................. 191.000.00-------------------------------------------------------------1.00----------
.................................................................................................................................................................................................................................................................................................CAGTGAGGTGCAGTAAG.................................... 171.000.00-----1.00------------------------------------------------------------------
.................................................................................................................................................CCTCTGCCCACCCGCTATG.................................................................................................................................................................................. 191.000.00----------------------------------------------1.00-------------------------
..................................................................................................................................................................................................................................................CCTTGCCCCAACCGAA.................................................................................... 161.000.00------------------------------------1.00-----------------------------------
............................................................................................................................GAAGCGGCTGGTGGGCGTG....................................................................................................................................................................................................... 1920.500.50------------------------------------------------------------------0.50-----
..............................................................................................................................TGGAAGCGGCTGGTGGGCG..................................................................................................................................................................................................... 1920.500.50------------------------0.50-----------------------------------------------
..............................................................................................................................GGAAGCGGCTGGTGGGCG...................................................................................................................................................................................................... 1820.500.50-------------------------------------------------------------------0.50----