ID: uc010uny.1_intron_0_0_chr15_82934687_r.5p
GENE: (7)
chr15:83013406-83013655-


(1)
AGO2.ip
(3)
B-CELL
(5)
BREAST
(6)
CELL-LINE
(6)
CERVIX
(1)
HELA
(4)
LIVER
(3)
OTHER
(6)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGAAGCTGCCAGGGCAGGAGAGGCTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGAGC
...................................................((.(((..((((.........((((....)))).........((.((....))..))......))))....)))..)).........................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577589(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532880(GSM532880)
G659T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR040027(GSM532912)
G220T. (cervix)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
........................................................................................................GGAGGAGAGGCTGTGTGAACACTG..........................................................................................................................2412.000.00-6.006.00-----------------------------------
..................................................................................................TGAACAGGAGGAGAGGCTGTGTGAACACTG..........................................................................................................................306.000.00-----------3.00-3.00------------------------
...................................TGAACAGGAGGAGAGGGAA....................................................................................................................................................................................................195.000.00---5.00----------------------------------
......................................................TGTGAACAGGAGGAGAGGCCACG.............................................................................................................................................................................234.000.00----4.00---------------------------------
............................................................................................................................................................................TGTTAGAACAGGAGAGGCGGCAAGAG....................................................263.000.003.00-------------------------------------
..............TGAACAGGAGGAGAGGCTGTGTTAAC..................................................................................................................................................................................................................263.000.003.00-------------------------------------
.....................................................................................................ACAGGAGGAGAGGCTGTGTGT................................................................................................................................213.000.00---------3.00----------------------------
..................................................................................................TGAACAGGAGGAGAGGCTGTGTA.................................................................................................................................233.000.003.00-------------------------------------
..........................................................AACAGGAGGAGAGGCTGTGGGG..........................................................................................................................................................................223.000.00------3.00-------------------------------
..................................................................................................TGAACAGGAGGAGAGGCTGTGTGAGC..............................................................................................................................263.000.003.00-------------------------------------
........................................................................................................GGAGGAGAGGCTGTGTGGATA.............................................................................................................................213.000.00-----3.00--------------------------------
........................................................................................................GGAGGAGAGGCTGTGTGTA...............................................................................................................................193.000.00-------3.00------------------------------
...................................................................................................GAACAGGAGGAGAGGCTGGGGG.................................................................................................................................223.000.00------------3.00-------------------------
.....................................................................................................ACAGGAGGAGAGGCTGTGTGTACA.............................................................................................................................243.000.00--------------3.00-----------------------
..............TGAACAGGAGGAGAGGCTGTGTGAAT..................................................................................................................................................................................................................263.000.003.00-------------------------------------
........................................................TGAACAGGAGGAGAGGCTGTGTGAACAGGAT...................................................................................................................................................................313.000.003.00-------------------------------------
....................................................................................................AACAGGAGGAGAGGCTGGGTG.................................................................................................................................213.000.00---------------3.00----------------------
....................................................................................................AACAGGAGGAGAGGCTGTGTGT................................................................................................................................223.000.00--------3.00-----------------------------
.....................GAGGAGAGGCTGTGTGAACAGGAGGAGAA........................................................................................................................................................................................................292.000.002.00-------------------------------------
...................................................................................GGAGGAGAGGCTATGTTGCT...................................................................................................................................................202.000.00------------------2.00-------------------
.........................AGAGGCTGTGTGAACAGGAGGAGAGT.......................................................................................................................................................................................................262.000.002.00-------------------------------------
...................................................................................................................................................AGGCTGCTGGAAGAGAAGG....................................................................................192.000.00-----------------------1.00---------1.00----
..........................GAGGCTGTGTGAACAGGAGGAGAGGCTTT...................................................................................................................................................................................................292.000.002.00-------------------------------------
..........................GAGGCTGTGTGAACAGGAGGAGAGGCTAA...................................................................................................................................................................................................292.000.002.00-------------------------------------
.................................TGTGAACAGGAGGAGAGGCTAAGCC................................................................................................................................................................................................252.000.00----------2.00---------------------------
..........................GAGGCTGTGTGAACAGGAGGAGCGG.......................................................................................................................................................................................................252.000.00-----------------2.00--------------------
.........................................................................................................................................................CTGGAAGAGGTGGAGAAGCTGTTAGAACTTT..................................................................311.000.001.00-------------------------------------
.......................................................................................................................................................................GAAGCTGTTAGAACAGGAGAGGCGT..........................................................251.000.001.00-------------------------------------
....................................................................................................................................................................................CAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTTT....................................341.000.00--------------------1.00-----------------
.........................................................................................................................................................................AGCTGTTAGAACAGGAGAGTGC...........................................................221.000.001.00-------------------------------------
...................................................................................................................................................................................ACAGGAGAGGCGGCAGGAGGG..................................................211.000.00------------------------------------1.00-
.......................................................................................................................................................................GAAGCTGTTAGAACAGGAGAGGCGGCG........................................................271.000.001.00-------------------------------------
..........................................................................................................................................................................................................................................GACGAGGTGGAGGAGTGG181.000.00----------------1.00---------------------
....................................................................................................................................................................................CAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTAA....................................341.000.00--------------------------------1.00-----
..........................................................................................................AGGAGAGGCTGTGTGAACAGGAGAAGCCGG..................................................................................................................301.000.00--------------------1.00-----------------
...............................................................................................................................................................................................GCAGGAGGAGCAGGAGGCGC.......................................201.000.00------------------------------1.00-------
..........TACGTGAACAGGAGGAGAGGCAT.........................................................................................................................................................................................................................231.000.001.00-------------------------------------
......................................................................................................................................................................AGAAGCTGTTAGAACAGGAGAGGCAGT.........................................................271.000.001.00-------------------------------------
........................................................................................................................................................GCTGGAAGAGGTGGAGAAT...............................................................................191.000.00--------------------------1.00-----------
........................................................................................................................................................GCTGGAAGAGGTGGAGAAGCTGGTA.........................................................................251.000.00---------------------1.00----------------
.....................................................................................................................................................................GAGAAGCTGTTAGAACAGGAGAGGCGGCG........................................................291.000.001.00-------------------------------------
....AGAGGCTACGTGAACAGGAGGAGAGGCTGTGGGAA...................................................................................................................................................................................................................351.000.00----------------------1.00---------------
.......................................................................................................................TGAACAGGAGAAGCTGCCAGGGCAGT.........................................................................................................261.000.001.00-------------------------------------
.....................................................................................................................................................................GAGAAGCTGTTAGAACAGGAGAGGCGTT.........................................................281.000.001.00-------------------------------------
...................................................................................................................................................................TGGAGAAGCTGTTAGAACAGGAGAGGA............................................................271.000.001.00-------------------------------------
.................................................................................................................................................AGAGGCTGCTGGAAGACG.......................................................................................181.000.00------------------------1.00-------------
............................................................................................................................................................................TGTTAGAACAGGAGAGGCGGCAGTAGG...................................................271.000.001.00-------------------------------------
........................................................................................................................................................................................AGAGGCGGCAGGAGGGGTG...............................................191.000.00----------------------------------1.00---
..........TACGTGAACAGGAGGAGAGGCC..........................................................................................................................................................................................................................221.000.001.00-------------------------------------
.............................................................................................................................................................................................................AGAGGCTGCTGGAGAATTC..........................191.000.00---------------------1.00----------------
...................................................................................................................................................................TGGAGAAGCTGTTAGAACACTG.................................................................221.000.00-1.00------------------------------------
...................................................................................................................................................................TGGAGAAGCTGTTAGAACAGGAGAGGCGAAA........................................................311.000.001.00-------------------------------------
............................................................................................................................................................................TGTTAGAACAGGAGAGGCGGCAGGAGC...................................................271.000.001.00-------------------------------------
.................................................................................................................................AAGCTGCCAGGGCAGGACTGT....................................................................................................211.000.00-------------------1.00------------------
............................................................................................................................AGGAGAAGCTGCCAGGGCAGGAGAGGCTGGGGG.............................................................................................331.000.001.00-------------------------------------
......................................................................................................................................................................................GGAGAGGCGGCAGGAATA..................................................181.000.00---------------------------1.00----------
...............................................................................................................................................................................................GCAGGAGGAGCAGGAGGCA........................................191.000.00-----------------------------------1.00--
.................................................................................................................................AAGCTGCCAGGGCAGGACCG.....................................................................................................201.000.00-------------------1.00------------------
...................................................................................................................................................................................................................TGCTGGAGAGGGAGAGACA....................191.000.00-------------------------------1.00------
.............................................................................TGAACAGGAGGAGAGGCTATGTGAAC...................................................................................................................................................2680.500.500.50-------------------------------------
............................................................................................................................................................................................................GAGAGGCTGCTGGAGAGGGAGAGGCTGCTGGACG............3490.110.11-------------------------------------0.11
....................................................................................................................................................................................................................GCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGA..3690.110.11-------------------------------------0.11

Antisense strand
GAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGAAGCTGCCAGGGCAGGAGAGGCTGCTGGAAGAGGTGGAGAAGCTGTTAGAACAGGAGAGGCGGCAGGAGGAGCAGGAGAGGCTGCTGGAGAGGGAGAGGCTGCTGGACGAGGTGGAGGAGC
...................................................((.(((..((((.........((((....)))).........((.((....))..))......))))....)))..)).........................................................................................................................
..................................................51...............................................................................132....................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038854(GSM458537)
MM653. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040036(GSM532921)
G243N. (cervix)
SRR189782TAX577589(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR189784SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
GSM532880(GSM532880)
G659T. (cervix)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040022(GSM532907)
G575N. (cervix)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577453(Rovira)
total RNA. (breast)
SRR040035(GSM532920)
G001T. (cervix)
SRR040027(GSM532912)
G220T. (cervix)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
.............................................................................................................................................CAGGAGAGGCTGCTGTTTT.......................................................................................... 192.000.00----------------2.00---------------------
..........................................................................................................................................................................................................AGGAGAGGCTGCTGGAGAGGGCC......................... 231.000.00----------------------------1.00---------
.......................................................................................................................................................TGCTGGAAGAGGTGGATTT................................................................................ 191.000.00-------------------------1.00------------
...................................................................................................................................................................................ACAGGAGAGGCGGCAGGAGGAGCAGGAGACCT....................................... 321.000.00----------1.00---------------------------