ID: uc010unt.1_intron_2_0_chr15_83013585_r
GENE: (6)
chr15:83013535-83013907-


(1)
AGO2.ip
(2)
BREAST
(6)
CELL-LINE
(2)
CERVIX
(2)
LIVER
(2)
OTHER
(4)
SKIN
(1)
TESTES
(1)
UTERUS

Sense strand
GAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTG
............................((((.(((..((...((......))..))..)))..........((((....)))).......))))......................................................................................................................................................................................................................................................................................
...............16..................................................................................100...............................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
............................................................................................................................................................................................GGAGGAGAGGCTGTGTGAACACTG.................................................................................................................................................................2432.000.00--16.0016.00----------------
.....................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGGAA.............................................................................................................1917.000.00-17.00------------------
..............TGAACAGGAGGAGAGGCTGTGTGAACACTG.........................................................................................................................................................................................................................................................................................................................................3016.000.00---------------8.008.00---
.....................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTACGTAAAA......................................................................................................2612.000.0012.00-------------------
...............................................................................................................................................................TGTGAACAGGAGGAGAGGCCACG...............................................................................................................................................................................................2310.000.00-----10.00--------------
..........................................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTGTGTTAAC.................................................................................269.000.009.00-------------------
.................................................................................................................................................................................................................................................................................................................................................................ACAGGAGGAGAGGCTGTGTGT219.000.00----------9.00---------
.........................................................................................................................................................................................ACAGGAGGAGAGGCTGTGTGTACA....................................................................................................................................................................249.000.00------------9.00-------
................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTGTGTA..............................................................................................................................239.000.009.00-------------------
..................................................................................................................................................................................................................................AACAGGAGGAGAGGCTGTGGGG.............................................................................................................................229.000.00-------9.00------------
............................................................................................................................................................................................GGAGGAGAGGCTGTGTGGATA....................................................................................................................................................................219.000.00------9.00-------------
........................................................................................................GGAGGAGAGGCTGTGTGTA..........................................................................................................................................................................................................................................................199.000.00--------9.00-----------
.................................................................................................................................................................................................................................GAACAGGAGGAGAGGCTGGGGG..............................................................................................................................229.000.00-----------9.00--------
..............................................................................................................................................AACAGGAGGAGAGGCTGGGTG..................................................................................................................................................................................................................219.000.00-------------9.00------
........................................................................................................................................................................................AACAGGAGGAGAGGCTGTGTGT.......................................................................................................................................................................229.000.00---------9.00----------
...........................................................................................................................................................................................................................................................................................................................GAGGAGAGGCTGTGTGAACAGGAGGAGAA.............................298.000.008.00-------------------
..........................GAGGCTGTGTGAACAGGAGGAGAGGCTTT..............................................................................................................................................................................................................................................................................................................................298.000.008.00-------------------
........................................................................................................................................................GAGGCTGTGTGAACAGGAGGAGAGGCTAA................................................................................................................................................................................................298.000.008.00-------------------
....................................................................................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTGTGTGAAT.......................................268.000.008.00-------------------
.....................................................................................................................................................................................................................................................................................AGAGGCTGTGTGAACAGGAGGAGAGT......................................................................268.000.008.00-------------------
........................................................TGAACAGGAGGAGAGGCTGTGTGAGC...................................................................................................................................................................................................................................................................................................268.000.008.00-------------------
................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTGTGTGAACAGGAT......................................................................................................................318.000.008.00-------------------
...................................................................................................................................................................................................................................................TGTGAACAGGAGGAGAGGCTAAGCC.........................................................................................................258.000.00----8.00---------------
............................................................................................................................................................................................................................................GAGGCTGTGTGAACAGGAGGAGCGG................................................................................................................258.000.00--------------8.00-----
................................................................................................................................................................................................................................................................AGAGGCTACGTGAACAGGAGGAGAGGCTGTGGGAA..................................................................................357.000.00-----------------7.00--
..................................................................................................................................................................................TACGTGAACAGGAGGAGAGGCC.............................................................................................................................................................................227.000.007.00-------------------
........................................................................................................................................................................GAGGAGAGGCTACGTGAAGA.........................................................................................................................................................................................207.000.00------------------7.00-
......................................................................................................................................................................................................................................................................TACGTGAACAGGAGGAGAGGCAT........................................................................................237.000.007.00-------------------
.....................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTACGTGAAAA.....................................................................................................276.000.006.00-------------------
.......................................................................................................................................................................................................................................................AACAGGAGGAGAGGCTACGCG.........................................................................................................216.000.00----6.00---------------
...........................................................................................................................................................................................................TGAACAGGAGGAGAGGCTACGTGAACT...............................................................................................................................................276.000.006.00-------------------
.................................................................................................................................................................TGAACAGGAGGAGAGGCTACGTAAC...........................................................................................................................................................................................256.000.006.00-------------------
...............................................................................................................................................................................................................................................................................................................................................GGAGGAGAGGCTATGTTGCT..................202.000.00-------------------2.00
.........................................................................................................................................................................................................................................................................................................................................TGAACAGGAGGAGAGGCTATGTGAAC..................2680.500.500.50-------------------

Antisense strand
GAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTACGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTGAACAGGAGGAGAGGCTATGTGAACAGGAGGAGAGGCTGTGTG
............................((((.(((..((...((......))..))..)))..........((((....)))).......))))......................................................................................................................................................................................................................................................................................
...............16..................................................................................100...............................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553576(SRX182782)
source: Testis. (testes)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191577(GSM715687)
93genomic small RNA (size selected RNA from t. (breast)
SRR038854(GSM458537)
MM653. (cell line)
SRR038857(GSM458540)
D20. (cell line)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR040036(GSM532921)
G243N. (cervix)