ID: uc010uhd.1_intron_1_0_chr15_60641365_r.3p
GENE: (6)
chr15:60641315-60641564-


(1)
AGO2.ip 		(5)
B-CELL 		(6)
BREAST 		(16)
CELL-LINE 		(7)
CERVIX 		(1)
FIBROBLAST 		(2)
HEART 		(3)
HELA 		(4)
LIVER 		(2)
OTHER 		(52)
SKIN 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
TGCTGTATGTGGAATTTTTCATTGTGGCATCATGTCGGCACTGAAAAAGTTTTGGATTTTGGAGCATTTTAGATTTCAGATTTTCAGATCAGGGATGCTCAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAGGGCAAGGGGACGCGAGATAAGGTCCTGATCAGAATCATGGTCTCCCGCAGTGAAGTGGACATGTTGAAAATTAGGTCTGAAT
................................................((((.((......((((((((..(((((.........)))))..))))))))..))...))))...........................................................................................................................................
............................................45.................................................................112........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040028(GSM532913)
G026N. (cervix)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)
.................................................TTTTGGATTTTGGAGCTATC.....................................................................................................................................................................................20022.001.0022.00---------------------------------------------------------------------------------------------------
.................................................................................................CTCAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAG..................................................................................71116.0016.00-16.00--------------------------------------------------------------------------------------------------
..................................................TTTGGATTTTGGAGCTATC.....................................................................................................................................................................................1912.000.0012.00---------------------------------------------------------------------------------------------------
...................................................................................................CAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAG..................................................................................6918.008.00--8.00-------------------------------------------------------------------------------------------------
...................................................................................................CAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTT.....................................................................................6618.008.00-8.00--------------------------------------------------------------------------------------------------
.....................................................................................................ACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAG..................................................................................6714.004.00--4.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTT.................1932.672.67----------0.33----0.67--------1.33----------------0.33----------------------------------------------------------
............................ATCATGTCGGCACTGAAAA...........................................................................................................................................................................................................1912.002.00-------------1.00-----------------------1.00--------------------------------------------------------------
...................................................................................TCAGATCAGGGATGCTCAACCTGTC..............................................................................................................................................252.000.00----2.00-----------------------------------------------------------------------------------------------
..................................................................................................TCAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAG..................................................................................7012.002.00--2.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGAATCATGGTCTCCC....................................1631.331.33--------------------------1.33-------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAATTAGGT......2341.251.25-------0.25--0.75-0.25---------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAATTAGGT......2641.251.25---0.25---0.50--------------------------------------------0.25--------------------------------------------0.25--
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGT..................1831.001.00----------0.67------------------------------0.33----------------------------------------------------------
............................................AAAAGTTTTGGATTT...............................................................................................................................................................................................1501.001.00------1.00---------------------------------------------------------------------------------------------
..............................................................AGCATTTTAGATTTCCTCC.........................................................................................................................................................................191.000.00--------------------------------------------1.00-------------------------------------------------------
........................TGGCATCATGTCGGCACTGAAAAAGTT.......................................................................................................................................................................................................2711.001.00-----------------------------------1.00----------------------------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTGAA..............2331.001.00-------0.330.33----------------0.33--------------------------------------------------------------------------
.......................................................ATTTTGGAGCATTTTAGATTTCGGAC.........................................................................................................................................................................261.000.00----1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................AAGGGGACGCGAGATAAGG............................................................1921.001.00---0.50--------0.50---------------------------------------------------------------------------------------
...............................................................................................TGCTCAACCTGTAGACGCTTT......................................................................................................................................2111.001.00-----------------------1.00----------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAATTAGT.......221.000.00----------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................AACAAATATCAACTTGATTTTCAG..................................................................................2411.001.00---------------------------------------------1.00------------------------------------------------------
.................................................................................................CTCAACCTGTAGACGCTTTCTTTAACGA.............................................................................................................................2811.001.00--------------1.00-------------------------------------------------------------------------------------
....................ATTGTGGCATCATGTCGG....................................................................................................................................................................................................................1811.001.00-------------------1.00--------------------------------------------------------------------------------
..............................................AAGTTTTGGATTTTGGAGCACC......................................................................................................................................................................................221.000.00------------------------------1.00---------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAAAA............2131.001.00-----------------------0.33--------0.33---------------------------0.33---------------------------------------
.............................................................................................................................................................................................................TGGTCTCCCGCAGTGAAG...........................1821.001.00-------------------------0.50------------------------------------0.50-------------------------------------
....................................................................................................AACCTGTAGACGCTTTCTTTAACGA.............................................................................................................................2511.001.00--------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATG...................1831.001.00--------0.33------0.33--------------------------------------------------------------------0.33---------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAAT...........1941.001.00----------------0.50----------------------------------------0.25--0.25---------------------------------------
...............................................................................................................................................................................................CCTGATCAGAATCATGGTCTCCCGC..................................2521.001.00------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................................CTTGATTTTCAGGGCGCTA...........................................................................191.000.00-----1.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTGAA..............2231.001.00---------0.67----------------------0.33-------------------------------------------------------------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAATT..........2041.001.00---------0.50-------0.25--------------0.25-------------------------------------------------------------------
.................................................TTTTGGATTTTGGAGC.........................................................................................................................................................................................1601.001.00------1.00---------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTGA...............2131.001.00------0.33-----0.33-----0.33---------------------------------------------------------------------------------
....................................................................................................AACCTGTAGACGCTTTCTTTAA................................................................................................................................2211.001.00-------------------------------------------1.00--------------------------------------------------------
....................................................................................CAGATCAGGGATGCTGGCT...................................................................................................................................................191.000.00----------------------------------------------1.00-----------------------------------------------------
...........................CATCATGTCGGCACTGAAAAAGTTTT.....................................................................................................................................................................................................2611.001.00-----------------------------1.00----------------------------------------------------------------------
..CTGTATGTGGAATTTTTCATTGTGGC..............................................................................................................................................................................................................................2611.001.00------------------1.00---------------------------------------------------------------------------------
............................................................GGAGCATTTTAGATTCTTG...........................................................................................................................................................................191.000.00----------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................................AAATATCAACTTGATTTTCAG..................................................................................2111.001.00---------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................CGAGATAAGGTCCTGATCAGAATCATGGT.........................................2921.001.00---------------------1.00------------------------------------------------------------------------------
..........................................................................................................................................................................CAAGGGGACGCGAGATAAGGT...........................................................2121.001.00---------------0.50----------------------------------------------------0.50-------------------------------
...................................................................................................CAACCTGTAGACGCTTTCTTTAACGATA...........................................................................................................................2811.001.00---------------------------------1.00------------------------------------------------------------------
....................................................................................................AACCTGTAGACGCTTTCTTTAACGATAA..........................................................................................................................2811.001.00-----1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TTGAAAATTAGGTCTGA..1750.800.80--------------------------------------------------0.80-------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAA............2040.750.75------------------0.25---------------------------------0.50-----------------------------------------------
..................................................................................................................................................................................................................................ACATGTTGAAAATTAGG.......1740.750.75---0.75------------------------------------------------------------------------------------------------
......................................................................................................................................................................................AGATAAGGTCCTGATCAGA.................................................1940.750.75---------0.50---------------------------------------------------------------------------------0.25--------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAA.............1940.750.75----------------------------------0.50----------------0.25------------------------------------------------
.......................................................................................................................................................................................................................CAGTGAAGTGGACATGTTGA...............2030.670.67----------------------------------------------------------0.330.33----------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTGAAAATT..........2730.670.67-------------------------------------------------------0.67--------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTGAAAAT...........2530.670.67------------0.33---------------------------------------------------------------------0.33-----------------
..............................................................................................................................................................................................TCCTGATCAGAATCATG...........................................1730.670.67-----------------------------------------------------0.67----------------------------------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAA..............1930.670.67--------0.33------------------------------------------------------------------0.33------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGA..................1830.670.33-------0.67--------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTG................2130.670.67----------0.33-------------------------------------------0.33---------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTGAAAA............2530.670.67---------0.33---------------------0.33--------------------------------------------------------------------
....................................................................................................................................................................................CGAGATAAGGTCCTGATCAGAATCATGG..........................................2820.500.50-------------------------------------------------------------------0.50--------------------------------
.....................................................................................................................................................................................................CAGAATCATGGTCTCCCGCAGTG..............................2320.500.50-------------------------------0.50--------------------------------------------------------------------
...............................................................................................................................................................................................................................TGGACATGTTGAAAATTAGGT......2140.500.50--------------------------------------------------------0.25---------------------------------0.25---------
................................................................................................................................................................................GACGCGAGATAAGGTCCTGATCAGAA................................................2620.500.50---------------------------------------------------------------0.50------------------------------------
.....................................................................................................................................................................................................CAGAATCATGGTCTCCCGC..................................1920.500.50-----------------------------------------------------------------------0.50----------------------------
.......................................................................................................................................................................................................GAATCATGGTCTCCCGC..................................1720.500.50------------------------------------------------------------------0.50---------------------------------
..............................................................................................................................................................................................................GGTCTCCCGCAGTGAAGTGGACATGTTG................2820.500.50----------------------------0.50-----------------------------------------------------------------------
......................................................................................................................................................................AGGGCAAGGGGACGCGAGATA...............................................................2120.500.50---------------------------------------0.50------------------------------------------------------------
............................................................................................................................................................................AGGGGACGCGAGATAAGG............................................................1820.500.50------------0.50---------------------------------------------------------------------------------------
...................................................................................................................................................................................GCGAGATAAGGTCCTGATCAGAATCATGGTCTC......................................3320.500.50----------------------0.50-----------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGAATCATGGTCTCCCGCAGTGAAGTGGACATG...................3420.500.50----------------------0.50-----------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGA...............1840.500.50--------0.25---------------------------------------------------------------------------------------0.25---
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAAT...........2140.500.50-----------------------------------------------------------0.25-------------0.25--------------------------
...................................................................................................................................................................................GCGAGATAAGGTCCTGATCAGAA................................................2320.500.50--------0.50-------------------------------------------------------------------------------------------
..................................................................................................................................................................................CGCGAGATAAGGTCCTG.......................................................1720.500.50----------------------------------------------------------------------0.50-----------------------------
..................................................................................................................................................................................................GATCAGAATCATGGTCTCCCGC..................................2220.500.50--------------0.50-------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAATT..........1940.500.50-------0.50--------------------------------------------------------------------------------------------
.........................................................................................................................................................................GCAAGGGGACGCGAGATA...............................................................1820.500.50---------------------------------------------------------------------0.50------------------------------
......................................................................................................................................................................AGGGCAAGGGGACGCGA...................................................................1720.500.50---------------------------------------0.50------------------------------------------------------------
.............................................................................................................................................................................GGGGACGCGAGATAAGGTCCTGATCA...................................................2620.500.50--------0.50-------------------------------------------------------------------------------------------
............................................................................................................................................................................................................ATGGTCTCCCGCAGTGAAGT..........................2020.500.50-------------------------0.50--------------------------------------------------------------------------
..................................................................................................................................................................................CGCGAGATAAGGTCCTGATCAG..................................................2220.500.50---------------------0.50------------------------------------------------------------------------------
..............................................................................................................................................................................GGGACGCGAGATAAGGTCCTGATC....................................................2420.500.50-------------------------------------------------------------0.50--------------------------------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAATTA.........2140.500.50-----0.25---------------------------------------------------------------------------------------------0.25
..............................................................................................................................................................................GGGACGCGAGATAAGGTC..........................................................1820.500.50------------------------------------------------------------------------0.50---------------------------
...............................................................................................................................................................................................................................TGGACATGTTGAAAATTAGGTC.....2240.500.50--------------------------------------------------------------------------------------------0.25-----0.25-
........................................................................................................................................................................................................................AGTGAAGTGGACATGTTGA...............1940.500.50---0.25-------------------------------------------------------------0.25----------------------------------
..........................................................................................................................................................................CAAGGGGACGCGAGATAAG.............................................................1920.500.50--------------------0.50-------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAAAAT...........2040.500.50-------0.25---------0.25----------------------------------------------------------------------------------
...........................................................................................................................................................................AAGGGGACGCGAGAT................................................................1520.500.50---------------------------------------------------0.50------------------------------------------------
...................................................................................................................................................................................GCGAGATAAGGTCCTGAT.....................................................1820.500.50----------------------------------------------------------------0.50-----------------------------------
.....................................................................................................................................................................................................CAGAATCATGGTCTCCCGCAGTGAAGTGGA.......................3020.500.50----------------------------0.50-----------------------------------------------------------------------
....................................................................................................................................................................................................TCAGAATCATGGTCTCCCGCAGTGAAGT..........................2820.500.50-----------0.50----------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAATTAG........2440.500.50-----------0.25-----0.25----------------------------------------------------------------------------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAATTAGGTC.....2540.500.50-------------------0.25-------------------------------------------------------------------------0.25------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGA...............1650.400.40-------------0.20---0.20----------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCCGCAGTGAAGTGGACATGTTGAAAATT..........2930.330.33-----------------------------------------------------------------------------------0.33----------------
....................................................................................................................................................................................CGAGATAAGGTCCTGATC....................................................1830.330.33------------------------------------------------------------------------------0.33---------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTT.................2030.330.33---------------------------------------------------------0.33------------------------------------------
........................................................................................................................................................................................................................AGTGAAGTGGACATGTTGAAAATTAG........2630.330.33-----------------0.33----------------------------------------------------------------------------------
.........................................................................................................................................................................................TAAGGTCCTGATCAGAATCATGG..........................................2330.330.33---------------------------0.33------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTGAAA.............2330.330.33-----------------------------------------------0.33----------------------------------------------------
..................................................................................................................................................................................................................TCCCGCAGTGAAGTGGACATGTTGAAAATTAGG.......3330.330.33-------------------------------------------------------------------------------0.33--------------------
....................................................................................................................................................................................................................CCGCAGTGAAGTGGACATGTTGAAA.............2530.330.33-------------0.33--------------------------------------------------------------------------------------
................................................................................................................................................................................................CTGATCAGAATCATGGT.........................................1730.330.33--------------------------------------------------------------------------------0.33-------------------
.......................................................................................................................................................................................................................CAGTGAAGTGGACATGTTGAAA.............2230.330.33-------------------------------0.33--------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAAAATT..........2330.330.33-----------------------------------------0.33----------------------------------------------------------
.........................................................................................................................................................................................TAAGGTCCTGATCAGAATCATGGT.........................................2430.330.33--------------------------------------------------------------------------------------0.33-------------
....................................................................................................................................................................................CGAGATAAGGTCCTGATCA...................................................1930.330.33------------------------------------------------------0.33---------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTGAAAAT...........2630.330.33-----------0.33----------------------------------------------------------------------------------------
................................................................................................................................................................................................................TCTCCCGCAGTGAAG...........................1560.330.33-----------------------------------------------0.33----------------------------------------------------
................................................................................................................................................................................................................TCTCCCGCAGTGAAGTGGACATGTTGAAA.............2930.330.33-------------------------------------------------------------------------------------0.33--------------
...................................................................................................................................................................................................................CCCGCAGTGAAGTGGA.......................1630.330.33---------------------------------------------------------------------------------0.33------------------
................................................................................................................................................................................................................TCTCCCGCAGTGAAGTGGACATGTTGAAAAT...........3130.330.33-----------0.33----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CGCAGTGAAGTGGACATGTTGAAAATTA.........2830.330.33---------0.33------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GATAAGGTCCTGATCAGAATCATGGT.........................................2630.330.33------------------------------------------------0.33---------------------------------------------------
.............................................................................................................................................................................................GTCCTGATCAGAATCATG...........................................1830.330.33-------------0.33--------------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGTGAAGTGGACATGTTGAAAATTAGGTC.....2930.330.33----------------------0.33-----------------------------------------------------------------------------
...................................................................................................................................................................................................................CCCGCAGTGAAGTGGACATGTTGAAA.............2630.330.33--------------0.33-------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CAGTGAAGTGGACATGTTGAAAAT...........2430.330.33-------------------------------------------------0.33--------------------------------------------------
........................................................................................................................................................................................................................AGTGAAGTGGACATGTTGAAA.............2130.330.33--------------------------------------------------------0.33-------------------------------------------
....................................................................................................................................................................................CGAGATAAGGTCCTGATCAGAA................................................2230.330.33-----------------------------------------------------------------------------0.33----------------------
.....................................................................................................................................................................................GAGATAAGGTCCTGAT.....................................................1630.330.33----------------------------------------------------------------------------------------0.33-----------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTGAAAATTAGG.......2930.330.33-----------------0.33----------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGTGAAGTGGACATGTTGAAAAT...........2330.330.33----------------------------------------------------------------------------0.33-----------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAAAATTAGGT......2730.330.33-----------------------------------------------------------------------------------------0.33----------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAAAATTAGGTC.....2830.330.33-----------0.33----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATG...................1730.330.33---------------------------------------------------------------------------------------0.33------------
......................................................................................................................................................................................................................GCAGTGAAGTGGACATGTTG................2030.330.33---------------0.33------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GTGAAGTGGACATGTTGAAA.............2030.330.33-----0.33----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TGGACATGTTGAAAATT..........1770.290.29----------------------------------0.14---------------------------------------0.14-------------------------
..............................................................................................................................................................................................................................GTGGACATGTTGAAAATT..........1840.250.25--------------------------------------------------------------------------0.25-------------------------
..............................................................................................................................................................................................................................GTGGACATGTTGAAAATTAGGTC.....2340.250.25-----------------------------------------------------------------0.25----------------------------------
...............................................................................................................................................................................................................................TGGACATGTTGAAAATTAGG.......2040.250.25---0.25------------------------------------------------------------------------------------------------
......................................................................................................................................................................................AGATAAGGTCCTGATCAGAATCAT............................................2440.250.25------0.25---------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GACATGTTGAAAATTAG........1740.250.25----------------0.25-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGTTGAAAATTAGGTCTG...1840.250.25-----0.25----------------------------------------------------------------------------------------------
..................................................................................TTCAGATCAGGGATGCTCAACCTGT...............................................................................................................................................2540.250.25------------------------------0.25---------------------------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAATTAGGTCTG...2640.250.25-------------------------------------------------0.25--------------------------------------------------
..............................................................................................................................................................................................................................GTGGACATGTTGAAAAT...........1740.250.25------------------------------------------------0.25---------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAATTAGGTCT....2840.250.25--------0.25-------------------------------------------------------------------------------------------
........................................................................................................................................................................................ATAAGGTCCTGATCAGAATC..............................................2040.250.25-------------------0.25--------------------------------------------------------------------------------
......................................................................................................................................................................................AGATAAGGTCCTGATCAGAA................................................2040.250.25----------------------------------0.25-----------------------------------------------------------------
...........................................................................................................................................................................................AGGTCCTGATCAGAATC..............................................1740.250.25----------------------------------0.25-----------------------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAATTAGGTC.....2440.250.25------------------------------------------------0.25---------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAATT..........2240.250.25---0.25------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAATTAGG.......2340.250.25-----------------------------0.25----------------------------------------------------------------------
....................................................................................................................................................................................CGAGATAAGGTCCTG.......................................................1540.250.25---0.25------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAA..............1740.250.25-----------------------------------------------------------------------------------------------0.25----
......................................................................................................................................................................................................................................GTTGAAAATTAGGTCTGAAT2040.250.25----------------------------------------------------------------------------------------------0.25-----
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAAAA............1940.250.25-----------0.25----------------------------------------------------------------------------------------
............................................................................................................................................................................................................................AAGTGGACATGTTGAAAA............1840.250.25----------------------------0.25-----------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAAAATTAGGTC.....2640.250.25--------------------------------0.25-------------------------------------------------------------------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAAAATTA.........2240.250.25---0.25------------------------------------------------------------------------------------------------
........................................................................................................................................................................................ATAAGGTCCTGATCAGA.................................................1740.250.25----------------------------------------------------------0.25-----------------------------------------
...........................................................................................................................................................................................................................GAAGTGGACATGTTGAAAATTAGGT......2540.250.25-------------------------------------------------0.25--------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTGAAAATTAGG.......2540.250.25-----------------------------------------------0.25----------------------------------------------------
.............................................................................................................................................................................................................................AGTGGACATGTTGAAAA............1750.200.20-------------------------------------------------------------------------0.20--------------------------
.........................................................................................................................................................................................TAAGGTCCTGATCAG..................................................1560.170.17---0.17------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGAAGTGGACATGTTG................1660.170.17---0.17------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TGGACATGTTGAAAATTC.........1870.140.29---------------------------------0.14------------------------------------------------------------------
.........................................TGAAAAAGTTTTGGATT................................................................................................................................................................................................1790.110.11-----0.11----------------------------------------------------------------------------------------------

Antisense strand
TGCTGTATGTGGAATTTTTCATTGTGGCATCATGTCGGCACTGAAAAAGTTTTGGATTTTGGAGCATTTTAGATTTCAGATTTTCAGATCAGGGATGCTCAACCTGTAGACGCTTTCTTTAACGATAACATTCTCAGCGAATGTAACAAATATCAACTTGATTTTCAGGGCAAGGGGACGCGAGATAAGGTCCTGATCAGAATCATGGTCTCCCGCAGTGAAGTGGACATGTTGAAAATTAGGTCTGAAT
................................................((((.((......((((((((..(((((.........)))))..))))))))..))...))))...........................................................................................................................................
............................................45.................................................................112........................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)		DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR390723(GSM850202)
total small RNA. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040028(GSM532913)
G026N. (cervix)		SRR390725(GSM850204)
small rna immunoprecipitated. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR040042(GSM532927)
G428N. (cervix)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		GSM532876(GSM532876)
G547T. (cervix)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR040039(GSM532924)
G531T. (cervix)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191427(GSM715537)
153genomic small RNA (size selected RNA from . (breast)		SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM532874(GSM532874)
G699T. (cervix)		TAX577740(Rovira)
total RNA. (breast)		SRR040023(GSM532908)
G575T. (cervix)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577738(Rovira)
total RNA. (breast)
...........................................AAAAAGTTTTGGATTTTATC........................................................................................................................................................................................... 201.000.00------------------------------------1.00---------------------------------------------------------------
........................................................................................................................................................................................ATAAGGTCCTGATCAATG................................................ 181.000.00--------------------------------------1.00-------------------------------------------------------------
.........................................AATCCAAAACTTTTTCA................................................................................................................................................................................................ 1790.110.11-----------------------------------0.11----------------------------------------------------------------