ID: uc010uez.1_intron_8_0_chr15_49169834_r
GENE: SHC4(1)
chr15:49169784-49170168-


(2)
AGO2.ip 		(2)
B-CELL 		(2)
BRAIN 		(17)
BREAST 		(21)
CELL-LINE 		(6)
CERVIX 		(1)
FIBROBLAST 		(1)
HEART 		(2)
HELA 		(6)
OTHER 		(12)
SKIN 		(1)
TESTES 		(1)
UTERUS 		(1)
XRN.ip

Sense strand
ACGTTTCCATCGATTCGAACTTCGTATCTAGGGACCCTGCATGCAAGAGCGTAACAGTTTCTGTGTTACTTAACCCTACTGCTGCTTGTAATGCTGCAAACCGGAAAATAACCTTACATGGCCTTCGTAACATTTAATGCTCCTTCCCCCCCTTCCTCTTCCCCTGGGCAATTTACCGATGTACTGATGACTTGTAAATCCACGTCTCCAAACCAGACAACATCCATAACCACAGATCAGCATATTAAGAACTAATCCATTTTGTCCTTTTAGTGTTTTCATTTAAAAAGTTAAATTCACAAACAACAGATATATTGTACTTTTTTTTTTTTTAGTTATAGTGAAGAAATACTTGGTCCCATTTCTTTTCGCCTGGGAGGTATCT
................................................................................................................................................................................((((((((((.((..((((........((((.......))))................((..(((((...(((.((...........)).)))...))))).))..................)))).)).))).)))))))....................................................................
...............................................................................................................................................................................176............................................................................................................................................................335................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR343335SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR343334
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTTC...................................................2244.000.0023.006.002.002.00-----------1.001.00--1.00-1.001.00-------1.00---1.00---1.00--1.00--------------1.00--------1.00------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGTTC....................................................2125.000.0010.009.00-1.00--------3.00------------------1.00----------------------------1.00-----------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTT....................................................219.000.00-------------3.00--------1.00-1.00--1.00-----------------------1.00----------1.00-1.00-------
.................AACTTCGTATCTAGGGGAAT............................................................................................................................................................................................................................................................................................................................................................208.000.00--------------------2.001.00---------------------------1.00----1.00----1.00---1.00--1.00-----
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGTTC.....................................................208.000.002.004.00-2.00--------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTTA...................................................225.000.002.00--1.00-------------------------1.00---1.00--------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTGTTC..................................................235.000.002.001.00---------------------------------------------1.00-------------------1.00----
......................CGTATCTAGGGACCCTGC.........................................................................................................................................................................................................................................................................................................................................................1813.003.00--2.00------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGTTA....................................................213.000.002.00-------------------------------------------1.00---------------------------
...................................................................................................................................................................................TGTACTGATGACTTGTAAATCCACGTCTCCA...............................................................................................................................................................................3113.003.00-----------3.00------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTTGT...................................................223.000.002.00-----------------------------------------1.00-----------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGG......................................................193.000.003.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTCC...................................................223.000.001.002.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGT.....................................................203.000.00------------------------1.00-------1.00----1.00----------------------------------
...................CTTCGTATCTAGGGACCCTG..........................................................................................................................................................................................................................................................................................................................................................2013.003.00-------3.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTTT...................................................223.000.003.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTTC....................................................213.000.003.00-----------------------------------------------------------------------
....................................................................................................................................................................................GTACTGATGACTTGTAAATCCACG.....................................................................................................................................................................................2412.002.00----2.00-------------------------------------------------------------------
..................................................................................................................................CATTTAATGCTCCTTCCA.............................................................................................................................................................................................................................................182.000.00-----------------2.00------------------------------------------------------
.........TCGATTCGAACTTCGTA.......................................................................................................................................................................................................................................................................................................................................................................1712.002.00---------2.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGCTC....................................................212.000.00-1.00-1.00--------------------------------------------------------------------
....................TTCGTATCTAGGGACCCTG..........................................................................................................................................................................................................................................................................................................................................................1912.002.00----------------------------1.00------1.00------------------------------------
..............TCGAACTTCGTATCTAGGGACC.............................................................................................................................................................................................................................................................................................................................................................2212.002.00------------------2.00-----------------------------------------------------
........ATCGATTCGAACTTCGTA.......................................................................................................................................................................................................................................................................................................................................................................1812.002.00--2.00---------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTGTTA..................................................232.000.001.00---------------------------------------------------------1.00-------------
.............................AGGGACCCTGCATGCAAG..................................................................................................................................................................................................................................................................................................................................................1812.002.00--------------2.00---------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTTTAAAAG...............................................242.000.00---------------------------------------------------------1.00----------1.00---
..................ACTTCGTATCTAGGGACCCTGCA........................................................................................................................................................................................................................................................................................................................................................2312.002.00-----------------------2.00------------------------------------------------
.....................................................................................................................................................................................TACTGATGACTTGTAAATCCAC......................................................................................................................................................................................2212.002.00----2.00-------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTGTC...................................................222.000.001.001.00----------------------------------------------------------------------
.................................ACCCTGCATGCAAGAGC...............................................................................................................................................................................................................................................................................................................................................1711.001.00---------------------------------------------1.00--------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTAC...................................................221.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTA....................................................211.000.00---------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTAT...................................................221.000.001.00-----------------------------------------------------------------------
...................................................................ACTTAACCCTACTGCTGCTTAATG......................................................................................................................................................................................................................................................................................................241.000.00----------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTTTAGAAG...............................................241.000.00-----1.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................ATTTCTTTTCGCCTGGGGCT.....201.000.00-----1.00------------------------------------------------------------------
................GAACTTCGTATCTAGGGACC.............................................................................................................................................................................................................................................................................................................................................................2011.001.00---------1.00--------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTACTC......................................................191.000.001.00-----------------------------------------------------------------------
.............TTCGAACTTCGTATCTAGGGACCC............................................................................................................................................................................................................................................................................................................................................................2411.001.00----------------1.00-------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................ACTTTTTTTTTTTTTAGTCTT..............................................211.000.00-----1.00------------------------------------------------------------------
.....TCCATCGATTCGAACTTCGTATCTAGG.................................................................................................................................................................................................................................................................................................................................................................2711.001.00--------------------------------------------------1.00---------------------
.................................................................................................AAACCGGAAAATAACTTTG.............................................................................................................................................................................................................................................................................191.000.00-------------------------1.00----------------------------------------------
.........................................................................................................................................................................................................................................................................................................................ATTGTACTTTTTTTTTTTGTG...................................................211.000.00-------------------------------------------------------------1.00----------
.............................AGGGACCCTGCATGCAAGAG................................................................................................................................................................................................................................................................................................................................................2011.001.00-------1.00----------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................TACTTTTTTTTTTTTTAGTGGC..............................................221.000.00------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTAGCG....................................................211.000.001.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................TGTACTTTTTTTTTTTTTACGG................................................221.000.00--------1.00---------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGC.......................................................181.000.001.00-----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................ACTTTTTTTTTTTTTAGGGG...............................................201.000.00--------1.00---------------------------------------------------------------
.................AACTTCGTATCTAGGGACCCT...........................................................................................................................................................................................................................................................................................................................................................2111.001.00-------------------------------------------------------1.00----------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTCCT...................................................221.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTCTCC...................................................221.000.00-1.00----------------------------------------------------------------------
................GAACTTCGTATCTAGGGGACT............................................................................................................................................................................................................................................................................................................................................................211.000.00----------------------------------------------1.00-------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTCC....................................................211.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGTTT.....................................................201.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTCTTG......................................................191.000.00----------1.00-------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGGTC....................................................211.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTCT...................................................221.000.001.00-----------------------------------------------------------------------
.....................................................................................................................................TTAATGCTCCTTCCCCATAA........................................................................................................................................................................................................................................201.000.00-----1.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTTTTCGG................................................251.000.001.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTTTGGG.................................................221.000.00------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGAT....................................................211.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTATAT....................................................211.000.001.00-----------------------------------------------------------------------
...........................CTAGGGACCCTGCATGCAAGAG................................................................................................................................................................................................................................................................................................................................................2211.001.00----1.00-------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTTTTAAG................................................251.000.00------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGTTG....................................................211.000.001.00-----------------------------------------------------------------------
.....................TCGTATCTAGGGACCCTGCATGCAAG..................................................................................................................................................................................................................................................................................................................................................2611.001.00----------------------------------------------------1.00-------------------
....................................................................................................................................................................................................................................ACCACAGATCAGCATATTAAG........................................................................................................................................2111.001.00--------------------------1.00---------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGTGC....................................................211.000.00-1.00----------------------------------------------------------------------
................GAACTTCGTATCTAGGGGCAA............................................................................................................................................................................................................................................................................................................................................................211.000.00----------------------------------------1.00-------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGGTT...................................................221.000.00-1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTTTCAG.................................................241.000.00-----1.00------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGCTC...................................................221.000.00-1.00----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGCCT.....................................................201.000.00-1.00----------------------------------------------------------------------
.............TTCGAACTTCGTATCTAGGGACCCTGC.........................................................................................................................................................................................................................................................................................................................................................2711.001.00-------1.00----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTATTT...................................................221.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGTTG.....................................................201.000.001.00-----------------------------------------------------------------------
.................AACTTCGTATCTAGGGGA..............................................................................................................................................................................................................................................................................................................................................................181.000.00---------------------------------------1.00--------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTCG...................................................221.000.001.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTTTACTGG...............................................241.000.00------1.00-----------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTGTGG....................................................211.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTGCG......................................................191.000.001.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGTTG...................................................221.000.001.00-----------------------------------------------------------------------
.................AACTTCGTATCTAGGGG...............................................................................................................................................................................................................................................................................................................................................................171.000.00-------------------1.00----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTGGTA...................................................221.000.00-1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTCGAG..................................................211.000.00--------1.00---------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTGGTC..................................................231.000.00-1.00----------------------------------------------------------------------
...............................GGACCCTGCATGCAAGAGCG..............................................................................................................................................................................................................................................................................................................................................2011.001.00------------------------------------------------1.00-----------------------
....TTCCATCGATTCGAACTTCG.........................................................................................................................................................................................................................................................................................................................................................................2011.001.00----1.00-------------------------------------------------------------------
.................AACTTCGTATCTAGGGACCCTGC.........................................................................................................................................................................................................................................................................................................................................................2311.001.00--1.00---------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................TATTGTACTTTTTTTTTTTGTT...................................................221.000.00-----------------------------------------------------1.00------------------
.......................................................................................................................................................CTTCCTCTTCCCCTGCTAC.......................................................................................................................................................................................................................191.000.00----------1.00-------------------------------------------------------------
....................................................................................................................................................................................GTACTGATGACTTGTAAATCCCCG.....................................................................................................................................................................................241.000.00----1.00-------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTGTTA...................................................201.000.00-------------------------------------------1.00----------------------------
..........................................................................................................................................................................................................................................................................................................................TTGTACTTTTTTTTTTTTTGAT.................................................221.000.00--------1.00---------------------------------------------------------------
.............................AGGGACCCTGCATGCAA...................................................................................................................................................................................................................................................................................................................................................1720.500.50---------------------------------------------------------------------0.50--
.............................................................................................................................................CCTTCCCCCCCTTCCT....................................................................................................................................................................................................................................1690.220.22----------------------------------------------------------------------0.22-
.............................................................................................................................................CCTTCCCCCCCTTCCTC...................................................................................................................................................................................................................................1760.170.17----------------------------------------------------------------------0.17-
......................................................................................................................................................................................................................................................................................................ATTCACAAACAACAG............................................................................1590.110.11-------------------------0.11----------------------------------------------

Antisense strand
ACGTTTCCATCGATTCGAACTTCGTATCTAGGGACCCTGCATGCAAGAGCGTAACAGTTTCTGTGTTACTTAACCCTACTGCTGCTTGTAATGCTGCAAACCGGAAAATAACCTTACATGGCCTTCGTAACATTTAATGCTCCTTCCCCCCCTTCCTCTTCCCCTGGGCAATTTACCGATGTACTGATGACTTGTAAATCCACGTCTCCAAACCAGACAACATCCATAACCACAGATCAGCATATTAAGAACTAATCCATTTTGTCCTTTTAGTGTTTTCATTTAAAAAGTTAAATTCACAAACAACAGATATATTGTACTTTTTTTTTTTTTAGTTATAGTGAAGAAATACTTGGTCCCATTTCTTTTCGCCTGGGAGGTATCT
................................................................................................................................................................................((((((((((.((..((((........((((.......))))................((..(((((...(((.((...........)).)))...))))).))..................)))).)).))).)))))))....................................................................
...............................................................................................................................................................................176............................................................................................................................................................335................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR189787DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189786SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR189784SRR037935(GSM510473)
293cand3. (cell line)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR040018(GSM532903)
G701N. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR037937(GSM510475)
293cand2. (cell line)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191619(GSM715729)
166genomic small RNA (size selected RNA from . (breast)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR040024(GSM532909)
G613N. (cervix)		SRR343335SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577580(Rovira)
total RNA. (breast)		SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR040028(GSM532913)
G026N. (cervix)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		TAX577739(Rovira)
total RNA. (breast)		TAX577741(Rovira)
total RNA. (breast)		SRR040014(GSM532899)
G623N. (cervix)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040038(GSM532923)
G531N. (cervix)		SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		SRR037939(GSM510477)
293cand5_rep1. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191615(GSM715725)
94genomic small RNA (size selected RNA from t. (breast)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		TAX577743(Rovira)
total RNA. (breast)		SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR444070(SRX128918)
Sample 27_4cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR343334
............................................................................................................................................................................................................................................................................................................................................................ATACTTGGTCCCATTTCTCTGC............... 221.000.00------1.00-----------------------------------------------------------------
......................................................CAGTTTCTGTGTTACTTAAACT..................................................................................................................................................................................................................................................................................................................... 221.000.00-1.00----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................TTAAAAAGTTAAATTTGTC.................................................................................... 191.000.00-----1.00------------------------------------------------------------------
......................................................................................................................................................AGGGGAAGAGGAAGG............................................................................................................................................................................................................................ 1501.001.00------------------------------------1.00-----------------------------------
...................................................................................................................................................................................................................................................................TTTTGTCCTTTTAGTCTC............................................................................................................ 181.000.00-----1.00------------------------------------------------------------------
................................................................................................................................................AGAGGAAGGGGGGGA.................................................................................................................................................................................................................................. 1560.170.17-----------------------------------------------------------------------0.17