uc010udi.1_intron_0_0_chr15_42841164

TTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCATACTGGAGTGCAGTGGCACAATCTCGGCTCACTACATCCTGACCTCTGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCGCACCTGGCCATGGACACTTTCTGATTGAGCTAAATGTTACTTTTGTTCCTCATGTAGAAAAACCTGGAAATTGAACTCCTGAAACTAGAAAAAGATACAGCAGATGT
....................................................((((.........(((((((....(((((......((((...))))...((((((((.....)).))))))....)))))))))))).))))..........................................................................................................
..................................................51..............................................................................................147.....................................................................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)

SRR553576(SRX182782)
source: Testis. (testes)

SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)

SRR189782

SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)

SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)

SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)

SRR037933(GSM510471)
293cand4_rep2. (cell line)

SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189784

DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)

DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR189786

SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)

DRR001482(DRX001036)
"Hela long total cell fraction, control". (hela)

DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)

SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)

SRR037936(GSM510474)
293cand1. (cell line)

SRR015446(SRR015446)
smallRNAs high-throughput sequencing Total. (breast)

SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)

SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)

SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)

SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)

SRR040037(GSM532922)
G243T. (cervix)

DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)

SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)

SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)

SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)

GSM416733(GSM416733)
HEK293. (cell line)

SRR037931(GSM510469)
293GFP. (cell line)

SRR015447(SRR015447)
nuclear small RNAs. (breast)

SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)

SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)

SRR037940(GSM510478)
293cand5_rep2. (cell line)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)

TAX577579(Rovira)
total RNA. (breast)

SRR038860(GSM458543)
MM426. (cell line)

SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR039613(GSM531976)
Human Normal Liver Tissue Sample 3. (liver)

SRR060168(GSM565978)
5-8F_nucleus. (cell line)

SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)

SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)

GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)

SRR037944(GSM510482)
293DcrTN_cand5. (cell line)

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAGA...........................................................................................................

5.00

0.00

3.00

1.00

...............................................................................TGACCTCTGGTGATCCACTTA......................................................................................................................................................

4.00

0.00

4.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAAAA..........................................................................................................

3.00

0.00

3.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAAT...........................................................................................................

3.00

0.00

1.00

..................................................................................CCTCTGGTGATCCACCTTAAT...................................................................................................................................................

3.00

0.00

3.00

......................................................................................................................................................................................................AGAAAAACCTGGAAATTGAA................................

3.00

.......................................................................................................................TGGGATTACAGGAGTGAGCCAAAAA..........................................................................................................

2.00

0.00

2.00

...............................................................................TGACCTCTGGTGATCCACCTTT.....................................................................................................................................................

2.00

0.00

1.00

...............................................................................TGACCTCTGGTGATCCACTTTT.....................................................................................................................................................

2.00

0.00

1.00

.......................................................................................................................TGGGATTACAGGAGTGAGCCAAAT...........................................................................................................

2.00

0.00

1.00

..............................................................................................................................................................................................................CTGGAAATTGAACTCTG...........................

2.00

0.00

2.00

...............................................................................................................................................................................................................TGGAAATTGAACTCCTGAAACTAGAA.................

2.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAATTT..........................................................................................................

2.00

0.00

2.00

...............................................................................TGACCTCTGGTGATCCACCAAT.....................................................................................................................................................

2.00

0.00

1.00

..........................................CTGGAGTGCAGTGGCACAATCTCGGTCCG...................................................................................................................................................................................

2.00

0.00

2.00

.........................................ACTGGAGTGCAGTGGCACAGCCG..........................................................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAGAT..........................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................TTGAACTCCTGAAACTAGAAAAAGATACAGC......

1.00

...............................................................................TGACCTCTGGTGATCCACTCAA.....................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAACT..........................................................................................................

1.00

0.00

1.00

.............................................................................................................................................................................................................CCTGGAAATTGAACTCTG...........................

1.00

0.00

1.00

............................................................................................................TCCCAAAGTGCTGGGATTACAGGAGTGTGGC...............................................................................................................

1.00

0.00

1.00

.....................................................................................................................GCTGGGATTACAGGAGTGAGGGGC.............................................................................................................

1.00

0.00

1.00

....................................CCCATACTGGAGTGCAGTGG..................................................................................................................................................................................................

1.00

..................................................CAGTGGCACAATCTCGTCCC....................................................................................................................................................................................

1.00

0.00

1.00

.................................TCACCCATACTGGAGTGCAGACCC.................................................................................................................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCTTTA...........................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAATAG..........................................................................................................

1.00

0.00

1.00

....................................CCCATACTGGAGTGCAGTTGCG................................................................................................................................................................................................

1.00

0.00

1.00

.................................TCACCCATACTGGAGTGCAGCGGC.................................................................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................GGGATTACAGGAGTGAGGAC..............................................................................................................

1.00

0.00

1.00

...................................................................................................................................AGTGAGCCACCGCACCTGGGC..................................................................................................

1.00

0.00

1.00

....................................................................................................................................................GGCCATGGACACTTTCTGATT.................................................................................

1.00

.......................................................................................................................................................................................................................GAACTCCTGAAACTAGAAAAAG.............

1.00

..................................CACCCATACTGGAGTGCAGTGGCACC..............................................................................................................................................................................................

1.00

0.00

1.00

.............................................................................................................................................CGCACCTGGCCATGGACACTTTCTGATTGAGCTAAATGTTACTTTTGTTCCTCATGTAG..................................................

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCTTA............................................................................................................

1.00

0.00

1.00

.....................................................................................................................................................................................................................TTGAACTCCTGAAACTAGAAAAAGATAC.........

1.00

........................................................................................................................................................................................................AAAAACCTGGAAATTGATC...............................

1.00

0.50

1.00

.........................................ACTGGAGTGCAGTGGCACAGCCC..........................................................................................................................................................................................

1.00

0.00

1.00

...........................................................................................................CTCCCAAAGTGCTGGGATTACAGGAGCGC..................................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAAAC..........................................................................................................

1.00

0.00

1.00

......................................................................................................................CTGGGATTACAGGAGTGAGCCAAGT...........................................................................................................

1.00

0.00

1.00

...........................................................................................................................ATTACAGGAGTGAGCCACCGCACCTGGCAT.................................................................................................

1.00

0.00

1.00

.............................................................................................................CCCAAAGTGCTGGGATTACAGGAGCGC..................................................................................................................

1.00

0.00

1.00

..............................................................................................................................................................................................................................TGAAACTAGAAAAAGATACAGCAGATG.

1.00

.....................................................................................................................................TGAGCCACCGCACCTGGGAC.................................................................................................

1.00

0.00

1.00

...............................................................................TGACCTCTGGTGATCCACCTTTT....................................................................................................................................................

1.00

0.00

1.00

........................................................................................................................................................................................................AAAAACCTGGAAATTGA.................................

0.50

...................................................................................................................................AGTGAGCCACCGCACCTGGCCATG...............................................................................................

0.25

.................................TCACCCATACTGGAGTGCAGTGGCACA..............................................................................................................................................................................................

0.17

TTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCACCCATACTGGAGTGCAGTGGCACAATCTCGGCTCACTACATCCTGACCTCTGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCGCACCTGGCCATGGACACTTTCTGATTGAGCTAAATGTTACTTTTGTTCCTCATGTAGAAAAACCTGGAAATTGAACTCCTGAAACTAGAAAAAGATACAGCAGATGT ....................................................((((.........(((((((....(((((......((((...))))...((((((((.....)).))))))....)))))))))))).)))).......................................................................................................... ..................................................51..............................................................................................147.....................................................................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR387910(GSM843862) antibody for ip: Ago2. (ago2 cell line)	SRR553576(SRX182782) source: Testis. (testes)	SRR553573(SRX182779) source: Cerebellum. (Cerebellum)	SRR189782	SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver)	SRR037942(GSM510480) 293DroshaTN_cand5. (cell line)	SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood)	SRR037933(GSM510471) 293cand4_rep2. (cell line)	SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189784	DRR000555(DRX000313) "THP-1 whole cell RNA, no treatment". (cell line)	DRR000558(DRX000316) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR189786	SRR342897(SRX096793) small RNA seq of Left atrial tissue. (heart)	DRR001482(DRX001036) "Hela long total cell fraction, control". (hela)	DRR001488(DRX001042) "Hela short nuclear cell fraction, LNA(+)". (hela)	SRR330905(SRX091743) tissue: normal skindisease state: normal. (skin)	SRR037936(GSM510474) 293cand1. (cell line)	SRR015446(SRR015446) smallRNAs high-throughput sequencing Total. (breast)	SRR330873(SRX091711) tissue: skin psoriatic involveddisease state:. (skin)	SRR039614(GSM531977) HBV-infected Liver Tissue. (liver)	SRR553572(SRX182778) source: Frontal Cortex. (Frontal Cortex)	SRR342894(SRX096790) small RNA seq of Right atrial tissue. (heart)	SRR040037(GSM532922) G243T. (cervix)	DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line)	SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin)	SRR330910(SRX091748) tissue: normal skindisease state: normal. (skin)	SRR330890(SRX091728) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR326279(GSM769509) cytoplasmic fraction was isolated using PARIS. (cell line)	GSM416733(GSM416733) HEK293. (cell line)	SRR037931(GSM510469) 293GFP. (cell line)	SRR015447(SRR015447) nuclear small RNAs. (breast)	SRR207114(GSM721076) "IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)	SRR191624(GSM715734) 31genomic small RNA (size selected RNA from t. (breast)	SRR037940(GSM510478) 293cand5_rep2. (cell line)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR342900(SRX096796) small RNA seq of Right atrial tissue. (heart)	TAX577579(Rovira) total RNA. (breast)	SRR038860(GSM458543) MM426. (cell line)	SRR330902(SRX091740) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver)	SRR060168(GSM565978) 5-8F_nucleus. (cell line)	SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver)	SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell)	GSM956925Ago2PAZ(GSM956925) "cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)	SRR037944(GSM510482) 293DcrTN_cand5. (cell line)
......................GTCTCACTCTGTCACCCATACTCCGG..........................................................................................................................................................................................................	26		3.00	0.00	-	3.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................AGTGGCACAATCTCGGCCTG...................................................................................................................................................................................	20		3.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-
..................................................................................CCTCTGGTGATCCACCTGCCTCAGG...............................................................................................................................................	25		2.00	0.00	2.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...............................................................................................................................CAGGAGTGAGCCACCGCACCTGAT...................................................................................................	24		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-
...........................................................................................ATCCACCTGCCTCAGCCTCCCAGGCG.....................................................................................................................................	26		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................AGAGTCTCACTCTGTCACCCATCC...............................................................................................................................................................................................................	24		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................GTGGCACAATCTCGGCTCACGCC...............................................................................................................................................................................	23		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..............................................................................................................CCAAAGTGCTGGGATTACAGGAGTGAGC................................................................................................................	28		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................................................................................................................GGAGTGAGCCACCGCACCTCGT...................................................................................................	22		1.00	0.00	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.......................................................................................................................................AGCCACCGCACCTGGCCATA...............................................................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
........................................................CACAATCTCGGCTCACTAAAA.............................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.............................................................................................................................................................................................................................CTGAAACTAGAAAAAGATAAAG.......	22		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...........................................................................................ATCCACCTGCCTCAGCCGAGA..........................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-
............................................................................................................................TTACAGGAGTGAGCCACCGAA.........................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-
................................................................................GTGGATCACCAGAGGTC.........................................................................................................................................................	17	0	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
...................................................AGTGGCACAATCTCGGCTCTG..................................................................................................................................................................................	21		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.........................................................................................TGATCCACCTGCCTCAGCCTCCCAAACCG....................................................................................................................................	29		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
............................................................ATCTCGGCTCACTACA..............................................................................................................................................................................	16		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................AGAAAGTGTCCATGGCC.....................................................................................	17	1	1.00	1.00	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	1.00	-	-	-	-	-	-	-	-
.................................................................................................................................ATGGCCAGGTGCGGTGGCTCACTCC................................................................................................	25	6	0.33	0.33	-	0.33	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
.................................TTGTGCCACTGCACTCCAGTATGGGTGA.............................................................................................................................................................................................	28	5	0.20	0.20	-	0.20	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-
..........................................................AGGATGTAGTGAGCCGAGATTG..........................................................................................................................................................................	22	6	0.17	0.17	0.17	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-