ID: uc010tyt.1_intron_2208_0_chr14_106553410_r
GENE: (1337)
chr14:106553360-106553911-


(9)
B-CELL
(1)
BRAIN
(8)
BREAST
(12)
CELL-LINE
(3)
CERVIX
(4)
HEART
(1)
LIVER
(7)
OTHER
(20)
SKIN
(1)
UTERUS

Sense strand
TGAGTGTCTCCAGCCTTGTCTATTTCAAAAATTCACGTACGCAGGGGGATTTCTTTCCTCAATTTTACACAGAGAAACTTCCAAAATGTTTGTTTCCTCTCCCATGGACTCTATCATCAGTTTCTATGTCAGTTTGCTTAGAATTTTGGCCTCCAGCTCCAACCAATTTGGTGCAAAAACATGATTTCATTCTTTTTTATAGCTGCAGAGTATTGCACTGTGTATAAGTACCATGTTTTCTTTATGCAGTCTATAACTGATGGGCGTCTAGGTTGATTCCCTGTATTAGGTAATGTGAATTGCACAGAGATAAACACATGAGTGGATGTGTCTTTGTGTTACAATGATTGGTTTTCTCTTGGGCATATACCCAGTAATGAGATTGCTGAGGGGAATAGTAGCTCTGTTTTAAGTTCTTTGAGAAATCTCTAGACTGACTGAATTGTTTTCTCTGTGAATGGTGATAATTATGTCAATATTTGTCAAATTTTGAATGTATTGTTTGAAGATTGTTATTTGTCAATATTACCTCATTAAAACTATTAAAAATGG
...............................................................................................................................((((((((.....))))..)))).....((.((((.....)))).))..(((((((........(((...(((((.(((((....))))))))))...)))...)))))))(((((.((((((.((((.((((((((.(((......))).)))...)))))....)))).)))))).)))))..................................................................................................................................................................................................................................................
...........................................................................................................................124........................................................................................................................................................................................311...............................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR189785SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343337SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGAA.....................................................................................................................................................................................................................................................1829.500.50-0.50-2.00--1.50-------0.50-0.50--0.50------------1.00-----1.00-------0.50---0.500.50----0.50---------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGAAT....................................................................................................................................................................................................................................................1928.500.50-2.00-1.50--------2.00-1.00----1.00---------------------------------0.50-0.50----------
...............................................................................................................................................................................................................................................................................................AGGTAATGTGAATTGCAGA......................................................................................................................................................................................................................................................196.000.006.00-----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGA......................................................................................................................................................................................................................................................1725.500.50-----1.50---------1.00-0.50----------0.501.00-------------------0.50----0.50-----------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGGAC....................................................................................................................................................................................................................................................1924.500.50------------------1.50----------------------0.500.500.500.50---0.50----------0.50------
...............................................................................................................................................................................................................................................................................................AGGTAATGTGAATTGC.........................................................................................................................................................................................................................................................1613.003.00----------1.00-----------1.00--------1.00----------------------------------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAG.......................................................................................................................................................................................................................................................1622.000.50---------------0.50------------0.50----------------0.50------------0.50-------
..............................................................................................................................................................................................................................................................................................TAGGTAATGTGAATTGCAGA......................................................................................................................................................................................................................................................201.000.00---------------------------------------1.00--------------------------
................................................................................................................................................................................................................................................................................................GGTAATGTGAATTGCAG.......................................................................................................................................................................................................................................................171.000.00--------------------1.00---------------------------------------------
..........................................AGGGGGATTTCTTTCTTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------1.00-----------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATATTACCTCATTTC...............171.000.00----------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................................................................................TTAGGTAATGTGAATTCTG........................................................................................................................................................................................................................................................191.000.00-----------------------------------1.00------------------------------
................................................................................................................................................................................................................................................................................................GGTAATGTGAATTGCAGGA.....................................................................................................................................................................................................................................................191.000.00---------------------1.00--------------------------------------------
..............................................................................................................................................................................................................................................................................................TAGGTAATGTGAATTGCAGAA.....................................................................................................................................................................................................................................................211.000.00-1.00----------------------------------------------------------------
................................................................................................................................TCAGTTTGCTTAGAATTGCGC...................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00--------------------------1.00---------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TGAGATTGCTGAGGGCATG............................................................................................................................................................191.000.00----------1.00-------------------------------------------------------
...............................................................................................................................................................................................................................................................................................AGGTAATGTGAATTGCAGAA.....................................................................................................................................................................................................................................................201.000.00-----------------------1.00------------------------------------------
..............................................................................................................................................................................................................................................................................................TAGGTAATGTGAATTGCAG.......................................................................................................................................................................................................................................................191.000.00-1.00----------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGG......................................................................................................................................................................................................................................................1720.500.50-----------------------------------------------0.50------------------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCA........................................................................................................................................................................................................................................................1520.500.50----------------------------------------------------0.50-------------
.................................................................................................................................................................................................................................................................................................GTAATGTGAATTGCAGGA.....................................................................................................................................................................................................................................................1820.500.50---------------------------------------------------------0.50--------
..................................................................................................................................................................................................................................................................................................TAATGTGAATTGCACGAC....................................................................................................................................................................................................................................................1870.430.14-----------------------------------------0.14-------------------0.14--0.14-
..................................................................................................................................................................................................................................................................................................TAATGTGAATTGCACGACA...................................................................................................................................................................................................................................................1970.290.14---------------------------------------------------------------0.14-0.14
..................................................................................................................................................................................................................................................................................................TAATGTGAATTGCAC.......................................................................................................................................................................................................................................................1570.140.14--------------------------------------------------------------0.14---
..................................................................................................................................................................................................................................................................................................TAATGTGAATTGCACGCA....................................................................................................................................................................................................................................................1870.140.14------------------------------------------------------------0.14-----

Antisense strand
TGAGTGTCTCCAGCCTTGTCTATTTCAAAAATTCACGTACGCAGGGGGATTTCTTTCCTCAATTTTACACAGAGAAACTTCCAAAATGTTTGTTTCCTCTCCCATGGACTCTATCATCAGTTTCTATGTCAGTTTGCTTAGAATTTTGGCCTCCAGCTCCAACCAATTTGGTGCAAAAACATGATTTCATTCTTTTTTATAGCTGCAGAGTATTGCACTGTGTATAAGTACCATGTTTTCTTTATGCAGTCTATAACTGATGGGCGTCTAGGTTGATTCCCTGTATTAGGTAATGTGAATTGCACAGAGATAAACACATGAGTGGATGTGTCTTTGTGTTACAATGATTGGTTTTCTCTTGGGCATATACCCAGTAATGAGATTGCTGAGGGGAATAGTAGCTCTGTTTTAAGTTCTTTGAGAAATCTCTAGACTGACTGAATTGTTTTCTCTGTGAATGGTGATAATTATGTCAATATTTGTCAAATTTTGAATGTATTGTTTGAAGATTGTTATTTGTCAATATTACCTCATTAAAACTATTAAAAATGG
...............................................................................................................................((((((((.....))))..)))).....((.((((.....)))).))..(((((((........(((...(((((.(((((....))))))))))...)))...)))))))(((((.((((((.((((.((((((((.(((......))).)))...)))))....)))).)))))).)))))..................................................................................................................................................................................................................................................
...........................................................................................................................124........................................................................................................................................................................................311...............................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR015363(GSM380328)
Germinal Center B cell (GC40). (B cell)
SRR189785SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR189784DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR343337SRR343334DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343336DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787SRR040028(GSM532913)
G026N. (cervix)
SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577743(Rovira)
total RNA. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038860(GSM458543)
MM426. (cell line)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577738(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
............................................................................................................................................................................................................................................................................................................................................................................TCATTACTGGGTATAT............................................................................................................................................................................ 1605.005.00--5.00---------------------------------------------------------------
..................................................................................................................................................GTTGGAGCTGGAGGCCA..................................................................................................................................................................................................................................................................................................................................................................................................... 1704.004.00--------2.00--2.00------------------------------------------------------
...................................................................................................................................................GTTGGAGCTGGAGGCC..................................................................................................................................................................................................................................................................................................................................................................................................... 1603.003.00----2.00------------1.00------------------------------------------------
........................................................................................................................................................................................................................................................................................CTGTATTAGGTAATGA................................................................................................................................................................................................................................................................ 162.000.00------1.00---------1.00-------------------------------------------------
....TGTCTCCAGCCTTGTCAATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 202.000.00---------2.00--------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATGTATTGTTTCACA............................................ 192.000.00-------2.00----------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TGAATTGCACAGAGAG................................................................................................................................................................................................................................................. 161.000.00-1.00----------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................TGAATTGCACAGAGATTC............................................................................................................................................................................................................................................... 181.000.00----------------------------------1.00-------------------------------
....................................................................................................................................................GTTGGAGCTGGAGGC..................................................................................................................................................................................................................................................................................................................................................................................................... 1501.001.00----1.00-------------------------------------------------------------
....................................................................................................................................................GCCTCCAGCTCCAACCTCTG................................................................................................................................................................................................................................................................................................................................................................................................ 201.000.00-------------1.00----------------------------------------------------
................................................................................................................................................................................................................................................................................................................CAGAGATAAACACATGCCG..................................................................................................................................................................................................................................... 191.000.00------------------------------------1.00-----------------------------
.................................................................................................................................................................................................................................................................................................................AGAGATAAACACATGACCCA................................................................................................................................................................................................................................... 201.000.00------------------------------1.00-----------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAACTATTAAAAACC. 181.000.00---------------------------1.00--------------------------------------
...............................................................................................................................................TTTTGGCCTCCAGCTCGG....................................................................................................................................................................................................................................................................................................................................................................................................... 181.000.00---------------------------------1.00--------------------------------
...........................................................................................................................................................................................................................................................................................................................................................TTGGTTTTCTCTTGGGCAGAA........................................................................................................................................................................................ 211.000.00-------------------------------------1.00----------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCTTTGAGAAATCCTG.......................................................................................................................... 191.000.00-------------1.00----------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGATTGTTATTTGCGT.............................. 181.000.00-------------------------1.00----------------------------------------
..................................................................................................................................................TGGCCTCCAGCTCCAACTG................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----1.00------------------------------------------------------------
...........................................................................................................................................................CAAATTGGTTGGAGC.............................................................................................................................................................................................................................................................................................................................................................................................. 1580.120.12------------------------------------------------------------0.12-----