| (1) AGO2.ip | (6) B-CELL | (1) BRAIN | (3) BREAST | (13) CELL-LINE | (1) CERVIX | (5) LIVER | (1) OTHER | (1) RRP40.ip | (7) SKIN | (1) XRN.ip |
| TTATAGATAAAAATTTATCAAGTAGGTTGATAGTGCCATTTGGGACTCTTATATCTTTACCTATTTAATCATTGCTTGTTTTCTCAATCACAATGAGTGTTGATTTCTCCATGTTCTATACATGTTAGTCTATTTTCTGTTCCAAATCCATTTATTAGGTCTTTTAAAATGGATTTTGGAAAAGTTGATCCTATTATTTTATGCAATATTTCACTTGAGTTGCAAAGGTATTCTTTTTATGATTATTTTGTCTGAAATTAACATAGCTATTCAAGTTTTCTTTGGTTTATATTTTCATGGTCTATATTTTTCCATCTTATTTCTTCTCTTTGTGAATATGTTAAGAAGTTTTCTTGGAGAAAGATAATTGCTGGGTCTTTTTTTTTTTTAGTCAACTATGAGGAATTATTTTTTAATGATATTACCCTTTTGTCCAATAATGGTTGTTTTGTCTTTTTACAATAATA ....................................................................((((((.(((......)))...)))))).....((((....(((((.....)))))..))))................................................................................................................................................................................................................................................................................................................................................. ..................................................51.................................................................................................150........................................................................................................................................................................................................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR189784 | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189785 | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR191567(GSM715677) 46genomic small RNA (size selected RNA from t. (breast) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR343335 | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................AAATGGATTTTGGAAATAGG......................................................................................................................................................................................................................................................................................... | 20 | 43.00 | 0.00 | 7.00 | 5.00 | - | 5.00 | - | - | 3.00 | 1.00 | 4.00 | 1.00 | 1.00 | - | 2.00 | 1.00 | - | 1.00 | 2.00 | - | - | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | 1.00 | 1.00 | - | 1.00 | - | 1.00 | 1.00 | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AAATGGATTTTGGAAATAG.......................................................................................................................................................................................................................................................................................... | 19 | 11.00 | 0.00 | 2.00 | 4.00 | - | 1.00 | - | - | 1.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AAATGGATTTTGGAAATA........................................................................................................................................................................................................................................................................................... | 18 | 6.00 | 0.00 | 1.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTCTTC.......................................................................... | 22 | 3.00 | 0.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGTTGTTTTGTATAA........... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATTATTTTTTAGAC................................................. | 20 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTATCGC......................................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATTATTTTTTACAG................................................. | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................TGTTCTATACATGTTAGTCT................................................................................................................................................................................................................................................................................................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ............................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTTTAGTCAACGATC................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATTATTTTTTACAC................................................. | 20 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTACCTC......................................................................... | 23 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................................................................................................................................................CTTTGGTTTATATTTTCTCAG....................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AAATGGATTTTGGAAGTAG.......................................................................................................................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTGTAC.......................................................................... | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................TTGCTGGGTCTTTTTTTTTTTTTTAC.......................................................................... | 26 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................AAATGGATTTTGGAAATC........................................................................................................................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATTATTTTTTAAATTT............................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ......................................................................................................................................................................AAATGGATTTTGGAAAAAAA......................................................................................................................................................................................................................................................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTACTG........................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTGTTTTGTCTTCTGC........ | 19 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTAGTCT......................................................................... | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................................................................................................................................................................................................................................................................TCTTATTTCTTCTCTTTGTTGA................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTCATC.......................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................................................................................................................................................................................TGGGTCTTTTTTTTTTTTAG............................................................................ | 20 | 1 | 1.00 | 1.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAATTATTTTTTACACT................................................ | 21 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...............................................................................................................................................................................................................................................................................................................................................................................TTGCTGGGTCTTTTTTTTTTTTT............................................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................................................................................................................................................................GGGTCTTTTTTTTTTTTGTTT.......................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| .......................................................................................................................................................................................................................................................................................CTTTGGTTTATATTTTCCCAT....................................................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTATAGATAAAAATTTATCAAGTAGGTTGATAGTGCCATTTGGGACTCTTATATCTTTACCTATTTAATCATTGCTTGTTTTCTCAATCACAATGAGTGTTGATTTCTCCATGTTCTATACATGTTAGTCTATTTTCTGTTCCAAATCCATTTATTAGGTCTTTTAAAATGGATTTTGGAAAAGTTGATCCTATTATTTTATGCAATATTTCACTTGAGTTGCAAAGGTATTCTTTTTATGATTATTTTGTCTGAAATTAACATAGCTATTCAAGTTTTCTTTGGTTTATATTTTCATGGTCTATATTTTTCCATCTTATTTCTTCTCTTTGTGAATATGTTAAGAAGTTTTCTTGGAGAAAGATAATTGCTGGGTCTTTTTTTTTTTTAGTCAACTATGAGGAATTATTTTTTAATGATATTACCCTTTTGTCCAATAATGGTTGTTTTGTCTTTTTACAATAATA ....................................................................((((((.(((......)))...)))))).....((((....(((((.....)))))..))))................................................................................................................................................................................................................................................................................................................................................. ..................................................51.................................................................................................150........................................................................................................................................................................................................................................................................................................................... | Size | Perfect hit | Total Norm | Perfect Norm | SRR039635(GSM518472) THP1_nuc_sRNAs. (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033715(GSM497060) Mantle Cell Lymphoma (Mino122). (B cell) | SRR189782 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033718(GSM497063) Multiple Myeloma (U266). (B cell) | SRR039620(GSM531983) HBV(+) Adjacent Tissue Sample 2. (liver) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR039621(GSM531984) HBV(+) HCC Tissue Sample 2. (liver) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR189784 | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR330880(SRX091718) tissue: skin psoriatic involveddisease state:. (skin) | SRR189785 | SRR015447(SRR015447) nuclear small RNAs. (breast) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | RoviraIPAgo2(Rovira) total RNA. (ago2 breast) | SRR330889(SRX091727) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330908(SRX091746) tissue: normal skindisease state: normal. (skin) | SRR207117(GSM721079) Whole cell RNA. (cell line) | SRR191567(GSM715677) 46genomic small RNA (size selected RNA from t. (breast) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR207112(GSM721074) RRP40 knockdown. (RRP40 cell line) | SRR330922(SRX091760) tissue: normal skindisease state: normal. (skin) | SRR343333(GSM796036) KSHV (HHV8). (cell line) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR039636(GSM518473) THP1_cyto_sRNAs. (cell line) | SRR040039(GSM532924) G531T. (cervix) | SRR330899(SRX091737) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR343335 | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060168(GSM565978) 5-8F_nucleus. (cell line) | SRR039622(GSM531985) HCV(+) Adjacent Tissue Sample. (liver) | SRR326282(GSM769512) "Dicer mRNA was knocked down using siDicer, t. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | GSM450598(GSM450598) miRNA sequencing raw reads from post-mortem s. (brain) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR330914(SRX091752) tissue: normal skindisease state: normal. (skin) | SRR330869(SRX091707) tissue: skin psoriatic involveddisease state:. (skin) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................TCAAGTAGGTTGATAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................................................................................................................................................................................................................TATTTCTTCTCTTTGTTGTC.................................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ....................................................................................................................................................................TAAAATGGATTTTGGTTC............................................................................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................................................................................................................................TGTTAAGAAGTTTTCCCA............................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................TCTATTTTCTGTTCCAAAG................................................................................................................................................................................................................................................................................................................................ | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ....................................................................................................................................................................TAAAATGGATTTTGGCTA............................................................................................................................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................ATTGTGATTGAGAAAACA..................................................................................................................................................................................................................................................................................................................................................................................... | 18 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ..........................................................................................AATCAACACTCATTG.......................................................................................................................................................................................................................................................................................................................................................................... | 15 | 6 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................ATTGTGATTGAGAAAA..................................................................................................................................................................................................................................................................................................................................................................................... | 16 | 7 | 0.14 | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 |