ID: uc010tyn.1_intron_3_0_chr14_105644073_r.5p
GENE: (1)
chr14:105647266-105647515-


(1)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(4)
AGO2.ip
(1)
BRAIN
(13)
BREAST
(19)
CELL-LINE
(15)
CERVIX
(1)
HEART
(2)
HELA
(3)
LIVER
(6)
OTHER
(1)
OVARY
(44)
SKIN
(1)
UTERUS

Sense strand
GCTGCGCCGCCTCACCCTACCTGCGGCCGCTCACGCTGCATTACCGCCAGGTGAGCCCGCGCCCCCGCGTCCCCCGCGCCCCCGCCGGCGGCCCGGCCCACGACCCGCGCCCCGCCCACCATCTTCCGCGCTGCCGGCCCCGCCCCGGAGCCCCGCCCCCGCCTCCCGCCGATCTCCCGGGCGGCCGCTTGTCCGCCCGCCGGATCGCGGGTTCCCAGACCCAGTGAGCCCCCAGGCCGGGGAGGGGCCG
.............................................................................((....(((((((((.(((..........(((...)))..........))).)))))))))...))..(((.((...))..))).........................................................................................
.............................................................................78..................................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR343335SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040034(GSM532919)
G001N. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR343336SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR040023(GSM532908)
G575T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040038(GSM532923)
G531N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM532887(GSM532887)
G761N. (cervix)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
...........................................................................................................................................CCGCCCCGGAGCCCCGCGG............................................................................................1957.000.60--1.00----1.00-----1.00----------1.00--1.00------------------1.00-----------------------------1.00-----------------------------
.......................................................................CCCCGCGCCCCCGCC....................................................................................................................................................................1505.005.00--------------2.00------1.00------------------------------------1.00-1.00---------------------------------------------
.............................................................................................................................................GCCCCGGAGCCCCGCGGA...........................................................................................184.000.00--1.00----------1.00--------------------1.00------1.00----------------------------------------------------------------
..................................................................................CGCCGGCGGCCCGGCGG.......................................................................................................................................................174.000.002.002.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................GCCCCCGCCTCCCGCTA...............................................................................172.000.00-----2.00----------------------------------------------------------------------------------------------------
...............................................................CCCGCGTCCCCCGCGGGG.........................................................................................................................................................................182.000.002.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................CCCCGCCCCGGAGCCCCGCGG............................................................................................2131.330.67-----------------------0.67----------------------------------------------------------0.33---0.33-------------------
.......................................................................CCCCGCGCCCCCGCCGGGGG...............................................................................................................................................................2051.200.200.400.80--------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCGGCGG.......................................................................................................................................................201.000.00---------1.00------------------------------------------------------------------------------------------------
.........................................................................................................................................CCCCGCCCCGGAGCCCCGCGGA...........................................................................................2231.000.67--------0.33----------------------------------------------------------------------0.33---------0.33----------------
..........................................................................................................................................CCCGCCCCGGAGCCCCGC..............................................................................................1841.001.00-----------------------0.250.25---0.25--------------------------------------------------------0.25--------------------
...........TCACCCTACCTGCGGCCGCTCACG.......................................................................................................................................................................................................................2411.001.00-----------------------------------------------------------------1.00----------------------------------------
......................................................................CCCCCGCGCCCCCGCACC..................................................................................................................................................................181.000.00--------------------------1.00-------------------------------------------------------------------------------
...........................................................................GCGCCCCCGCCGGCGAAA.............................................................................................................................................................181.000.00--------------------------------------1.00-------------------------------------------------------------------
.........................................................................CCGCGCCCCCGCCGGCGGG..............................................................................................................................................................191.000.00----------------1.00-----------------------------------------------------------------------------------------
.................................................................................CCGCCGGCGGCCCGGCGGA......................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCGGCGGA......................................................................................................................................................211.000.001.00---------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCGGCGC.......................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00----------------------------------
.....................................................................................................GACCCGCGCCCCGCCCCGGC.................................................................................................................................201.000.00-------------------------------------------------------------------1.00--------------------------------------
........................................................CCGCGCCCCCGCGTCCTCCC..............................................................................................................................................................................201.000.00---1.00------------------------------------------------------------------------------------------------------
..............................................................CCCCGCGTCCCCCGCGGGGG........................................................................................................................................................................201.000.00----------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................CCGCTTGTCCGCCCGCCGGATCGCGGGTTCT...................................311.000.00------------1.00---------------------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGCGGGCGG...........................................................................................................................................................231.000.00-------------------------------------------------------------------------1.00--------------------------------
.........................................................................................................................................................................................CGCTTGTCCGCCCGCCGGATCG...........................................2211.001.00-------------------1.00--------------------------------------------------------------------------------------
...............................................................................................................................GCGCTGCCGGCCCCGCGCG........................................................................................................191.000.00--1.00-------------------------------------------------------------------------------------------------------
...............................................................................................................................................CCCGGAGCCCCGCCCCCGGGGA.....................................................................................221.000.001.00---------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCGGGGCG......................................................................................................................................................211.000.00-1.00--------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCTTC.........................................................................................................................................................181.000.00---------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................GCCCCGGAGCCCCGCCGGCG.........................................................................................201.000.00---------------1.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCCGGATCGCGGGTTCCCAG................................2011.001.00------------------------------------------------------------------------------1.00---------------------------
.......................................................................CCCCGCGCCCCCGCCGGCGG...............................................................................................................................................................2011.001.00-----------------------1.00----------------------------------------------------------------------------------
...........................................................................GCGCCCCCGCCGGCGATGC............................................................................................................................................................191.000.00-------------------------------------1.00--------------------------------------------------------------------
.....................................................................TCCCCCGCGCCCCCGCCCC..................................................................................................................................................................1911.001.00---------------------------------------1.00------------------------------------------------------------------
.........................................................................................................................................................................CGATCTCCCGGGCGGCGC...............................................................181.000.00-----------------------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................CCGCCTCCCGCCGATACGC.........................................................................191.000.00-----------1.00----------------------------------------------------------------------------------------------
.......................................................CCCGCGCCCCCGCGTGGGG................................................................................................................................................................................191.000.00-1.00--------------------------------------------------------------------------------------------------------
.......................................................CCCGCGCCCCCGCGTCCTCCC..............................................................................................................................................................................211.000.00-------------------------1.00--------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGCGCC..............................................................................................................................................................201.000.001.00---------------------------------------------------------------------------------------------------------
......................................................................CCCCCGCGCCCCCGCCACG.................................................................................................................................................................191.000.00---1.00------------------------------------------------------------------------------------------------------
...........................................................................GCGCCCCCGCCGGCGGG..............................................................................................................................................................171.000.00-------1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................CTCCCGCCGATCTCCCGGGC....................................................................2011.001.00-1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................CCCAGACCCAGTGAGCCCCC.................2011.001.00--------------------1.00-------------------------------------------------------------------------------------
............................................................................CGCCCCCGCCGGCGGGCC............................................................................................................................................................181.000.00-----------------------------------------------------------------------------1.00----------------------------
...............................................................................CCCCGCCGGCGGCCCGGCC........................................................................................................................................................1911.001.00---------1.00------------------------------------------------------------------------------------------------
..................................................................................................................................................................CTCCCGCCGATCTCCCGGGCGG..................................................................2211.001.00-------------------1.00--------------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGCGGGC.............................................................................................................................................................211.000.001.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GCCGGATCGCGGGTTCCC..................................1811.001.00---------------------------------------------------------------------1.00------------------------------------
..........................................................................................................................................................................GATCTCCCGGGCGGCCGCT.............................................................1911.001.00----------------------------------------------------1.00-----------------------------------------------------
.......CGCCTCACCCTACCTATCT................................................................................................................................................................................................................................191.000.00---------------1.00------------------------------------------------------------------------------------------
.....................................................................TCCCCCGCGCCCCCGCC....................................................................................................................................................................1711.001.00--------1.00-------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CGATCTCCCGGGCGG..................................................................1511.001.00-------------------------------------------------1.00--------------------------------------------------------
................................................................................................................................................................GCCTCCCGCCGATCTCCCGGGCGTAT................................................................261.000.00----------------------------------------1.00-----------------------------------------------------------------
.....................................................................................CGGCGGCCCGGCCCACGCCCG................................................................................................................................................211.000.001.00---------------------------------------------------------------------------------------------------------
.............................................................................................................................................GCCCCGGAGCCCCGCGGAC..........................................................................................191.000.00----1.00-----------------------------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGGGA...............................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------
......................................................................CCCCCGCGCCCCCGCCGCGC................................................................................................................................................................201.000.00---------------------------------------------1.00------------------------------------------------------------
................................................................................CCCGCCGGCGGCCCGGGCC.......................................................................................................................................................191.000.00--------------------------------------------1.00-------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGCGGGGA............................................................................................................................................................221.000.00-1.00--------------------------------------------------------------------------------------------------------
............................................CGCCAGGTGAGCCCGGGG............................................................................................................................................................................................181.000.00----------1.00-----------------------------------------------------------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGGCGA...............................................................................................................................................................201.000.00----------------------------------------------------------------1.00-----------------------------------------
.............................................................CCCCCGCGTCCCCCGAG............................................................................................................................................................................171.000.00---1.00------------------------------------------------------------------------------------------------------
...................................................................CGTCCCCCGCGCCCCAGC.....................................................................................................................................................................181.000.00-1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCGCCCCGGAGCCCCGCGGAC..........................................................................................2151.000.60-1.00--------------------------------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGGCGGCGGCG..........................................................................................................................................................241.000.001.00---------------------------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCA...........................................................................................................................................................161.000.00-----1.00----------------------------------------------------------------------------------------------------
................................................................................CCCGCCGGCGGCCCGCCAG.......................................................................................................................................................191.000.00------------------------------------------------------------------1.00---------------------------------------
...............................................................CCCGCGTCCCCCGCGGGGA........................................................................................................................................................................191.000.00------------------------------------------1.00---------------------------------------------------------------
..............................................................................................................................................................................................................GCGGGTTCCCAGACCCAGTG........................2011.001.00------------------------------------1.00---------------------------------------------------------------------
................................................................................CCCGCCGGCGGCCCGGGAGG......................................................................................................................................................201.000.00-----------------1.00----------------------------------------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCTC..........................................................................................................................................................171.000.00-----------------------------------------------------------1.00----------------------------------------------
..........................................................................................................................................CCCGCCCCGGAGCCCCGCGG............................................................................................2040.751.00--0.25-----------------------------------------------------------------------------0.25---0.25---------------------
...............................................................................CCCCGCCGGCGGCCCG...........................................................................................................................................................1640.750.75---------------------------0.25----------------------------------------------------0.25--0.25----------------------
.........................................................................................................................................CCCCGCCCCGGAGCCCCGC..............................................................................................1930.670.67--------------------------0.33-------------------------------------------------------------0.33-----------------
............................................................................................................................................CGCCCCGGAGCCCCGCGG............................................................................................1880.620.50---------0.12------------------------------------------------------------------------0.120.12----------------0.12---0.12-
...........................................................................................................................................CCGCCCCGGAGCCCCGC..............................................................................................1750.600.60-------------------------------0.20-----------------------------------------------------------------0.200.20-------
.....................................................................................................................................................................................................................................CCCCAGGCCGGGGAGGGGCC.2020.500.500.50---------------------------------------------------------------------------------------------------------
..........................................................................................................................................CCCGCCCCGGAGCCCCGCGGA...........................................................................................2140.501.00--0.25----------------------------------------------------------------------------------------0.25--------------
................................................................................CCCGCCGGCGGCCCGGCGGG......................................................................................................................................................2020.500.50------------------------0.50---------------------------------------------------------------------------------
.........................................................................................................................................CCCCGCCCCGGAGCCCC................................................................................................1740.500.50---------------------------------------------------------------------------------0.50------------------------
................................................................................CCCGCCGGCGGCCCGGCGG.......................................................................................................................................................1920.500.50-------0.50--------------------------------------------------------------------------------------------------
............................................................................................................................................CGCCCCGGAGCCCCGC..............................................................................................1680.500.50--------------------------------0.12---------------------------------------------------0.120.12---------------0.12----
................................................................................CCCGCCGGCGGCCCGGC.........................................................................................................................................................1720.500.50-0.50--------------------------------------------------------------------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGGGGGA..............................................................................................................................................................2150.400.20-0.20----------------------------0.20---------------------------------------------------------------------------
.........................................................................................................................................CCCCGCCCCGGAGCCCCG...............................................................................................1830.330.33-------------------------------------------------------------------------------0.33--------------------------
...............................................................................CCCCGCCGGCGGCCCGAAC........................................................................................................................................................1940.250.75---------------------------------------------------------------------------------------------0.25------------
...............................................................................CCCCGCCGGCGGCCCGCGGG.......................................................................................................................................................2040.250.75--------------------------------------------------------------------------------------------0.25-------------
..........................................................................................................................................CCCGCCCCGGAGCCCCGCGGAC..........................................................................................2240.251.00----------------------------------------------------------------------------------------------0.25-----------
............................................................................................................................................CGCCCCGGAGCCCCGCGGA...........................................................................................1980.250.50------------------------------------------------------------------------------------------------------0.120.12--
...............................................................................CCCCGCCGGCGGCCCGCTCG.......................................................................................................................................................2040.250.75-----------------------------------------------------------------------------------------------0.25----------
...............................................................................CCCCGCCGGCGGCCCGCGCC.......................................................................................................................................................2040.250.75-0.25--------------------------------------------------------------------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGGGGCG..............................................................................................................................................................2150.200.20-0.20--------------------------------------------------------------------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGG..................................................................................................................................................................1750.200.20-----------------------------0.20----------------------------------------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGGGGGG..............................................................................................................................................................2150.200.20------------------------------------------------------------------------------------------------0.20---------

Antisense strand
GCTGCGCCGCCTCACCCTACCTGCGGCCGCTCACGCTGCATTACCGCCAGGTGAGCCCGCGCCCCCGCGTCCCCCGCGCCCCCGCCGGCGGCCCGGCCCACGACCCGCGCCCCGCCCACCATCTTCCGCGCTGCCGGCCCCGCCCCGGAGCCCCGCCCCCGCCTCCCGCCGATCTCCCGGGCGGCCGCTTGTCCGCCCGCCGGATCGCGGGTTCCCAGACCCAGTGAGCCCCCAGGCCGGGGAGGGGCCG
.............................................................................((....(((((((((.(((..........(((...)))..........))).)))))))))...))..(((.((...))..))).........................................................................................
.............................................................................78..................................................................................162......................................................................................
SizePerfect hitTotal NormPerfect NormSRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
GSM532877(GSM532877)
G691N. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR343335SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577741(Rovira)
total RNA. (breast)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR189784DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM956925PAZD5TAX577740(Rovira)
total RNA. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR189785SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040034(GSM532919)
G001N. (cervix)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
TAX577588(Rovira)
total RNA. (breast)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR040037(GSM532922)
G243T. (cervix)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR343336SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR040023(GSM532908)
G575T. (cervix)
TAX577739(Rovira)
total RNA. (breast)
GSM532890(GSM532890)
G576T. (cervix)
TAX577742(Rovira)
total RNA. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040038(GSM532923)
G531N. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
GSM532887(GSM532887)
G761N. (cervix)
GSM379268(GSM379268)
Small RNA from serous ovarian cancer tissue. (ovary)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
GSM956925Ago2D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR040022(GSM532907)
G575N. (cervix)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532879(GSM532879)
G659N. (cervix)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040032(GSM532917)
G603N. (cervix)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
.........................TAATGCAGCGTGAGCGGC............................................................................................................................................................................................................... 1813.003.00------3.00---------------------------------------------------------------------------------------------------
...............................................................................................GCCCACGACCCGCGCCCCTGG...................................................................................................................................... 212.000.00------------------2.00---------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCCTCCCGCCTGTG............................................................................ 192.000.00----1.00----------------------------------------------------1.00------------------------------------------------
.......................................................................................................................................................................................................................................CCAGGCCGGGGAGGGAAC. 181.000.00--------------------1.00-------------------------------------------------------------------------------------
..........................................................................................CGGGTCGTGGGCCGGGC............................................................................................................................................... 1711.001.00-----------------------------------1.00----------------------------------------------------------------------
..................................................................................................CACGACCCGCGCCCCGCCG..................................................................................................................................... 191.000.00------------------------------------------------------------------------1.00---------------------------------
................................................................................................................................................CCGGAGCCCCGCCCCCCGG....................................................................................... 191.000.00----------1.00-----------------------------------------------------------------------------------------------
................................................................................................................................................CCGGAGCCCCGCCCCCCGGG...................................................................................... 201.000.00----1.00-----------------------------------------------------------------------------------------------------
..........................................................................................................................................................GCCCCCGCCTCCCGCCTGT............................................................................. 191.000.00---------------------------------------------------------------------------1.00------------------------------
....................................................................................................CGACCCGCGCCCCGCCGGC................................................................................................................................... 191.000.00-------------------------------------------1.00--------------------------------------------------------------
.....GCCGCCTCACCCTACCCCT.................................................................................................................................................................................................................................. 191.000.00--------------------------------------------------1.00-------------------------------------------------------
.............................................................................................................................CCGCGCTGCCGGCCCCGTGCA........................................................................................................ 211.000.00-----------1.00----------------------------------------------------------------------------------------------
...........................................................................................CCCGGCCCACGACCCGCGCGCGG........................................................................................................................................ 231.000.00--------------------------------------------------------1.00-------------------------------------------------
.....................................................................................................GACCCGCGCCCCGCCA..................................................................................................................................... 161.000.00-1.00--------------------------------------------------------------------------------------------------------
........................................................................CCCGCGCCCCCGCCGTGG................................................................................................................................................................ 181.000.00--------1.00-------------------------------------------------------------------------------------------------
..............................................................................CCCCCGCCGGCGGCCCGGGA........................................................................................................................................................ 201.000.001.00---------------------------------------------------------------------------------------------------------
...........................................................................................CCCGGCCCACGACCCGGCG............................................................................................................................................ 191.000.00----------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................CCACCATCTTCCGCGCTA..................................................................................................................... 181.000.00---------------------------------------------------------------1.00------------------------------------------
................................................................................CCCGCCGGCGGCCCGGCCCGC..................................................................................................................................................... 2121.000.00------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................GCCCCGGAGCCCCGCCCTT.......................................................................................... 191.000.00-----------------1.00----------------------------------------------------------------------------------------
.............................................................................GGGCCGCCGGCGGGGGC............................................................................................................................................................ 1711.001.00-------------------------------------------------------------1.00--------------------------------------------
.......................................................................CCCCGCGCCCCCGCCGGCA................................................................................................................................................................ 191.000.00-----------------------------1.00----------------------------------------------------------------------------
.......................................................................................................CCCGCGCCCCGCCCAAC.................................................................................................................................. 171.000.00-----------------------------------------------------1.00----------------------------------------------------
...........................................................................................CCCGGCCCACGACCCGCGCTC.......................................................................................................................................... 211.000.00--------------------------------------------------------------1.00-------------------------------------------
.....................................................................................................GACCCGCGCCCCGCCATGT.................................................................................................................................. 191.000.00----------------------1.00-----------------------------------------------------------------------------------
.............................................................CCCCCGCGTCCCCCGATC........................................................................................................................................................................... 181.000.00----------------------------------------------------------------------1.00-----------------------------------
...................................................................................................................................TGCCGGCCCCGCCCCACGG.................................................................................................... 191.000.00------------------------------------------------1.00---------------------------------------------------------
...............................................................................CCCCGCCGGCGGCCCGCC......................................................................................................................................................... 1841.000.00-1.00--------------------------------------------------------------------------------------------------------
...........................................................................................................................................................CCCCCGCCTCCCGCCAATA............................................................................ 191.000.00---------------------------------1.00------------------------------------------------------------------------
.....................................................................................................GACCCGCGCCCCGCCATG................................................................................................................................... 181.000.00-------------------------------------------------------1.00--------------------------------------------------
...............................................................................................GCCCACGACCCGCGCGGGG........................................................................................................................................ 191.000.00--------------------------------1.00-------------------------------------------------------------------------
..........................................................................CGCGCCCCCGCCGGCTGGT............................................................................................................................................................. 191.000.001.00---------------------------------------------------------------------------------------------------------
................................................................................................GTGGGCGGGGCGCGGGTCGTGGG................................................................................................................................... 2311.001.00------------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................CGGCGGGAGGCGGGGGCGG............................................................................... 1911.001.00---------------------1.00------------------------------------------------------------------------------------
................................................................................................................................CGCTGCCGGCCCCGCCGTGG...................................................................................................... 201.000.00--------------------------------------------------------------------1.00-------------------------------------
.....................................................................TCCCCCGCGCCCCCGCCGGG................................................................................................................................................................. 201.000.00--------------------------------------------------------------------------1.00-------------------------------
................................................................................CCCGCCGGCGGCCCGGC......................................................................................................................................................... 171.000.00----------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................CGGAGCCCCGCCCCCCCGC...................................................................................... 191.000.001.00---------------------------------------------------------------------------------------------------------
..................................................................................................................CCCACCATCTTCCGCGT....................................................................................................................... 171.000.00------------------------------------------------------1.00---------------------------------------------------
....................................................................................................CGACCCGCGCCCCGCCGGCG.................................................................................................................................. 201.000.00-------------------------------1.00--------------------------------------------------------------------------
...................................................CGGGGGCGCGGGCTCA....................................................................................................................................................................................... 1620.500.50-------------------------0.50--------------------------------------------------------------------------------
........................................................................................................................................................GGCGGGAGGCGGGGGCGG................................................................................ 1830.330.33---------------------------------------------------------------------------------------0.33------------------
......................................................................................................................................GGCTCCGGGGCGGGGCCG.................................................................................................. 1840.250.25-0.25--------------------------------------------------------------------------------------------------------
...........................................................................................................................................GGCGGGGCTCCGGGGCGG............................................................................................. 1840.250.25------------------------------------------------------------------------------------------0.25---------------
.............................................................CGCGGGGGACGCGGGGG............................................................................................................................................................................ 1770.140.14---------------------------------------------------------------------------------------------------0.14------
.......................................................................................................................................................CCCGCCCCCGCCTCCCGCAA............................................................................... 200.110.00---------------------------------0.11------------------------------------------------------------------------
.......................................................................................................................................................CGGGAGGCGGGGGCGGG.................................................................................. 1790.110.11---------------------------------------------------------------------------------------------------------0.11