ID: uc010tya.1_intron_3_0_chr14_103601689_f
GENE: TNFAIP2(4)
chr14:103601639-103602195+


(4)
B-CELL 		(2)
BRAIN 		(14)
BREAST 		(9)
CELL-LINE 		(4)
CERVIX 		(5)
HEART 		(1)
HELA 		(1)
KIDNEY 		(8)
LIVER 		(1)
OTHER 		(1)
RRP40.ip 		(38)
SKIN 		(1)
TESTES

Sense strand
TCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATTTTCCCTTATAAAGGTTGGTTAGCTTTTCCTGTGGCCTGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAA
...........................................................................................................................................((..(((((......)))))...))...(((....(((.(((((((((.......)))))))))))))))...((((((((.......((((((((((((.........((((((((((((((....)))))))))..)))))(((.....)))...)))))))....)))))......)))))))).......................................................................................................................................................................................................................................
..........................................................................................................................................139........................................................................................................................................................................................326.....................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
...........................................................................................................................................................................................................................................................................................................AAGGACTCTTTGTAAACGATAGC...........................................................................................................................................................................................................................................23120.0020.00--1.005.00-2.00-1.00--1.00--1.001.00----1.00-1.00-----2.00----------------1.00------------------1.00------1.00-----1.00--------------
..........................................................................................................................................................................................................................................................................................................CAAGGACTCTTTGTAAACGATAGC...........................................................................................................................................................................................................................................2418.008.00--1.00-------1.00------------------1.001.00-----1.00-----------------1.00----------------1.00-------1.00-----------
....................................................................................................................................................................................................................................................................................................CAACACCAAGGACTCTTTGTAAACGATAGCTG.........................................................................................................................................................................................................................................3216.006.00-----2.00------1.00-----------------------1.00----------------------------------------------1.00--1.00----
............................................................................................................................................................................................................................................................................................................AGGACTCTTTGTAAACGATAGC...........................................................................................................................................................................................................................................2215.005.00-------1.00------1.00-----2.00-------------------1.00--------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATGGTGGAATGGAAGACAGA.2514.004.00---------3.00--------------------------------------------------------------------1.00------------
...................................................................................................................................................................................................................................................................................................................................................................................TCAGGGATCCCCGGACACCTCTGTCCAGAGC...........................................................................................................................................................3113.003.00----3.00--------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................AGGCAACACCAAGGACTCTTTG......................................................................................................................................................................................................................................................2212.002.001.00--------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTGGAATGGAAGACAGA.2112.002.00-----------------------------------2.00-------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGAATGGAAGACAGAA2112.002.00-------------------------------------2.00-----------------------------------------------------
...............................................................................................................................................CTCGGTTCCTCCCGGGTCTCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00----------------------------------------------1.00----1.00---------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGTGAGCGGGATTCAGCAA....................2212.002.002.00------------------------------------------------------------------------------------------
...................................................................GTGGCCTGACCTGCCTGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00--------2.00----------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGTGGAATGGAAGACAGAGG2612.002.002.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGTGGAATGGAAGACAGA.2412.002.00---------------2.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGGTGGAATGGAAGACAG..2212.002.001.00------------------------------------------------------------------------1.00-----------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGGTGGAATGGAAGACAGAA2412.002.002.00------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAATGGAAGACAAGCA192.000.00------------------------1.00--------------------------------------------------------1.00---------
..................................................................................................................................................GGTTCCTCCCGGGTCTCCT........................................................................................................................................................................................................................................................................................................................................................................................................1912.002.002.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................AACCAGGCAACACCAAGGA.............................................................................................................................................................................................................................................................1912.002.002.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGAATGGAAGACATA.201.000.001.00------------------------------------------------------------------------------------------
..................................................................................................................................................................CCTGTGCTCTGATGCTACTTCTGCCTAGCCC............................................................................................................................................................................................................................................................................................................................................................................3111.001.00------------------1.00------------------------------------------------------------------------
...GCATGGGGGCGCAGGGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................181.000.00---------------1.00---------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................CTCTTTGTAAACGATAGC...........................................................................................................................................................................................................................................1811.001.00------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................................................GTCAGCTGGAACTGGACAGACC...................................................................................................................................................................................................................................................................................................................................2211.001.00--1.00----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGCAATGGTGGAATGGAAG......2311.001.00-------------------------------------------------------1.00-----------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGTGGAATGGAAGATA...221.000.001.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGTGGAATGGAAGACCG..201.000.00------------------------------------------------------------1.00------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAGCAATGGTGGAATGGAAGACAGA.2711.001.001.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................GGCAGGAGCTCCCATCCTGGGC....................................................................................................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00-----------------------
...............................................................................................................................................................................................................................................................................................................................AGCTGATCGTGTGCACGCAAG.........................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGCAATGGTGGAATGGAAGA.....2411.001.00----------------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGTCCTCCTCGT........................................................................................................................1911.001.00--------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGTGGGGCCGAGGGCCCTCTTT.................................................................................................231.000.00--------1.00----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCGCCGTGAGCGGGATTCAGCAATGGTGG..............3211.001.00----------------------------------------------------1.00--------------------------------------
...............................................................................................................................................................................................................................................................................................................................................GCAAGGAAAGAACCAGGAG...........................................................................................................................................................................................................1911.001.00------------------------------------------------------------------------1.00------------------
...........................................................................................................................................................................................................................................................................................................AAGGACTCTTTGTAAACGATAGCTGA........................................................................................................................................................................................................................................2611.001.001.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATGGAAGACAGAA1911.001.001.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................AGCTGGAACTGGACAGACC...................................................................................................................................................................................................................................................................................................................................1911.001.00-1.00-----------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATGGTGGAATGGAAG......2011.001.00------------------------------------------------------------------------------------1.00------
..........................................................................................................................................................................................................TGCAGGCCCTGTCAGCTGG................................................................................................................................................................................................................................................................................................................................................1911.001.00-----------------------1.00-------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................AGGCAACACCAAGGACTCTTTGT.....................................................................................................................................................................................................................................................2311.001.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CAGCTGGAACTGGACAGACCTTGGT..............................................................................................................................................................................................................................................................................................................................2511.001.00--------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGACAGGGGCCGAGCCTCACCC.................................................................2411.001.001.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCAGCTCTCTGGAGA....................................................................................1921.001.00------------------------------------------------------------------1.00------------------------
...................................................................................................................................................................................................................................................................................................................TTTGTAAACGATAGC...........................................................................................................................................................................................................................................1511.001.00------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................AGGCAACACCAAGGACTCTTTGTA....................................................................................................................................................................................................................................................2411.001.00-1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................CAGGCAACACCAAGGACTC..........................................................................................................................................................................................................................................................1911.001.00-------------------------------1.00-----------------------------------------------------------
....................................................................................................................................................................................................................................................................................................CAACACCAAGGACTCTTTGTA....................................................................................................................................................................................................................................................2111.001.00---------------------1.00---------------------------------------------------------------------
....................CCCTCCCGGCCCCTATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00--------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................CAAGGAAAGAACCAGGAGG..........................................................................................................................................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------
.................................TATTTTCCCTTATAAAGGTTGGTTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----------------1.00--------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGTGGGTGGGGCCGGG...........................................................................................................191.000.00----------------------------------------------------------1.00--------------------------------
...................................................................................................................................................GTTCCTCCCGGGTCTACG........................................................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------1.00----------------------------------
...........................................................................................................................................................................................................................GGAACTGGACAGACCTCTG...............................................................................................................................................................................................................................................................................................................................191.000.00--1.00----------------------------------------------------------------------------------------
.......................TCCCGGCCCCTATTTTTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................AGGCCCTGTCAGCTGGAACTGGA.........................................................................................................................................................................................................................................................................................................................................2311.001.001.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................AGGAAAGAACCAGGAGGG.........................................................................................................................................................................................................1811.001.00-------------------------1.00-----------------------------------------------------------------
............................................................TTTTCCTGTGGCCTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................ACGCAAGGAAAGAACCAGGAGGG.........................................................................................................................................................................................................2311.001.00-----------------------------------------------------------------------------1.00-------------
.................................................................................................................................................................................................................................................................................................AGGCAACACCAAGGACTCTTT.......................................................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGGATTCAGCAATGGTG...............2011.001.001.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................CAGGAGCTCCCATCCTGGGCAG..................................................................................................................................................................................................................................................................................2211.001.001.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................ATAGCTGATCGTGTGCACGCAAGGAAAGAAC.................................................................................................................................................................................................................3111.001.00-----------------------1.00-------------------------------------------------------------------
.................................................................................................................................................CGGTTCCTCCCGGGTCTCCTG.......................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00------------------------------1.00------------------------------------------------------------
...................................................................................................................................................GTTCCTCCCGGGTCTACGC.......................................................................................................................................................................................................................................................................................................................................................................................................191.000.00------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGACTGTCCTCCTCGTGGGTGGT.................................................................................................................261.000.00----------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GAAAGAACCAGGAGGGAGAGTGCAGCCA.............................................................................................................................................................................................2811.001.001.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GCAGCCAACCAGGCAACACCAAGGAC............................................................................................................................................................................................................................................................2611.001.00-------------------------1.00-----------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................CAAGGACTCTTTGTAAACGATAG............................................................................................................................................................................................................................................2311.001.00------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................CTTTGTAAACGATAGC...........................................................................................................................................................................................................................................1611.001.00----------1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAATGGTGGAATGGAAGAC....2111.001.00---------1.00---------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGGATTCAGCAATGGTGGAATGGAA.......2711.001.00---------------------------------------------------------------------------1.00---------------
....................................................................................................................................................................................................................GTCAGCTGGAACTGGTG........................................................................................................................................................................................................................................................................................................................................171.000.00-----------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................................................................................................GGCAACACCAAGGACTCTTTG......................................................................................................................................................................................................................................................2111.001.001.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTGGAATGGAAGACAG..1911.001.00----------------------------------1.00--------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................GCTGATCGTGTGCACGCAAGG........................................................................................................................................................................................................................2111.001.00-------------------------------------------------1.00-----------------------------------------
................................................AGGTTGGTTAGCTTTTTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00-----------------1.00-------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TGCAGCCAGGCTCAGGAGTC.................................................................................................................................................................................201.000.00-----------------1.00-------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCCGAGCCTCACCCATCT.............................................................2311.001.00-------------------------------------------1.00-----------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTGGGGCCGAGGGCTGTG....................................................................................................211.000.00-----------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................CGGGTCTCCTGTGCTCTGATGCTAC.........................................................................................................................................................................................................................................................................................................................................................................................2511.001.00---------------------------------------------------------1.00---------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGACAGGGGCCGAGCCTCACCCAT...............................................................2511.001.00---------------------------------------------------------------------1.00---------------------
...............................................................................................................................................................................................................................................................................................................................AGCTGATCGTGTGCACGCAAGG........................................................................................................................................................................................................................2211.001.00------------------------------------------------1.00------------------------------------------
.............................................................................................................................................................................................................................................................................................................GGACTCTTTGTAAACGATAGC...........................................................................................................................................................................................................................................2111.001.00------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................AAAGAACCAGGAGGGAGAGTGCAG................................................................................................................................................................................................2411.001.001.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................ACACCAAGGACTCTTTGTAAACGATAGCTGAT.......................................................................................................................................................................................................................................3211.001.00--------------------------------1.00----------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................TAGCTGATCGTGTGCACGCAAGGA.......................................................................................................................................................................................................................2411.001.00------1.00------------------------------------------------------------------------------------
..................................................................................................................................AGCAGCGCTGGTTCTCGGTTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------1.00-----------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................AACCAGGCAACACCAAGGACTCTTTC......................................................................................................................................................................................................................................................261.000.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGTGGAATGGAAGACAGAA2311.001.00------------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................GAAAGAACCAGGAGGGAGAG.....................................................................................................................................................................................................2011.001.00----------------------------------------------------------------1.00--------------------------
............................................................................................................................................................GGGTCTCCTGTGCTCTGATGCTACTTC......................................................................................................................................................................................................................................................................................................................................................................................2711.001.00----1.00--------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATGGTGGAATGGAAGACA...2311.001.00-1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................CTACTTCTGCCTAGCCCTGGCGG......................................................................................................................................................................................................................................................................................................................................................................2311.001.00-----------------------------1.00-------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATGGTGGAATGGAAGACAGT.251.000.00----------------------------1.00--------------------------------------------------------------
................................................................................................................................AGAGCAGCGCTGGTTCTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00--------------------------1.00----------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACCAGGCAACACCAAGGAC............................................................................................................................................................................................................................................................1911.001.00-1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGGTGGAATGGAAGACAG..2111.001.00-------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATCTGCCCTCTGCAGCCCAGGG...........................................2511.001.00----------------------1.00--------------------------------------------------------------------
.............................................................................................................................................................GGTCTCCTGTGCTCTGATGCT...........................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-----------------------------------------------1.00-------------------------------------------
..........................................................................................................................................................................................................................................TTGGTTTGTTTACATGTCCGATGGGGGC.......................................................................................................................................................................................................................................................................................................2811.001.00----------------1.00--------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCCGAGGGCCCTCAG..................................................................................................171.000.00-----------1.00-------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ACCAGGCAACACCAAGGACTCTTTG......................................................................................................................................................................................................................................................2511.001.00-------------------1.00-----------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................CGCAAGGAAAGAACCAGGAGGGA........................................................................................................................................................................................................2311.001.001.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................AACCAGGCAACACCAAGG..............................................................................................................................................................................................................................................................1811.001.001.00------------------------------------------------------------------------------------------
....................................................................................TGAGTGCCCAGCAAGCCTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00--------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAATGGTGGAATGGAA.......1911.001.00----------------------------------1.00--------------------------------------------------------
..............................................................................................................................................................................................................GGCCCTGTCAGCTGGAACTGGACAGACC...................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------------------------1.00----------------------------------------------------
...........................................................................................................................................................CGGGTCTCCTGTGCTCTGATGC............................................................................................................................................................................................................................................................................................................................................................................................2211.001.00------------1.00------------------------------------------------------------------------------
...........................................................................................................................................................CGGGTCTCCTGTGCTCTGATG.............................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................AGCCAACCAGGCAACACCAAG...............................................................................................................................................................................................................................................................2111.001.00--------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................................................CTGTCAGCTGGAACTGGACAGAC....................................................................................................................................................................................................................................................................................................................................2311.001.00---------------------------------------1.00---------------------------------------------------
...........................................................................................................................................................................................................................................................CCGATGGGGGCAGGAG..................................................................................................................................................................................................................................................................................................1630.670.67----------------------------------------------------------------------------------------0.67--
..........................................................................................................................................TGGTTCTCGGTTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................1520.500.50-----------------0.50-------------------------------------------------------------------------
..........................................................................................................................................................................................................................TGGAACTGGACAGACC...................................................................................................................................................................................................................................................................................................................................1620.500.50------------------0.50------------------------------------------------------------------------
...................................................................................................................CTGGGAGCTGTTAAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1650.200.20-----------------------------------------------------------------------------------------0.20-
.....................................................................................................................................................................................................................................................................................................................................................AAAGAACCAGGAGGGA........................................................................................................................................................................................................1660.170.17--------------------------------------0.17----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTCGTGGGTGGG.................................................................................................................1560.170.17------------------------------------------------------------------------------------------0.17

Antisense strand
TCAGCATGGGGGCGCAGGAGCCCTCCCGGCCCCTATTTTCCCTTATAAAGGTTGGTTAGCTTTTCCTGTGGCCTGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCTGGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCTGGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACACCAAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGATCCCCGGACACCTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTCTTCAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATGGTGGAATGGAAGACAGAA
...........................................................................................................................................((..(((((......)))))...))...(((....(((.(((((((((.......)))))))))))))))...((((((((.......((((((((((((.........((((((((((((((....)))))))))..)))))(((.....)))...)))))))....)))))......)))))))).......................................................................................................................................................................................................................................
..........................................................................................................................................139........................................................................................................................................................................................326.....................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		GSM532874(GSM532874)
G699T. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577742(Rovira)
total RNA. (breast)		SRR553576(SRX182782)
source: Testis. (testes)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)		SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		TAX577740(Rovira)
total RNA. (breast)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189786SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450606(GSM450606)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR040037(GSM532922)
G243T. (cervix)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)		SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)		SRR040008(GSM532893)
G727N. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		TAX577739(Rovira)
total RNA. (breast)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR040025(GSM532910)
G613T. (cervix)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)		SRR343335TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577453(Rovira)
total RNA. (breast)		SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)		GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCCGAGCCTCACCCATCTCCTC......................................................... 2712.000.00---------------------------------2.00---------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCATCTGCCCTCTATGA.................................................. 192.000.00-------------2.00-----------------------------------------------------------------------------
...............................................................................................................................................................................TCCGCCAGGGCTAGGCAGAAGTAGC..................................................................................................................................................................................................................................................................................................................................................................... 2511.001.00------------------------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCAGAGAGCTGAAGAGGGCCC.................................................................................... 2411.001.00----------------------------------------------------------------------------------1.00--------
..........................................TTATAAAGGTTGGTTAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------------------1.00--------------------------------------------------------------
............................................................................................................................................................................................AGCCCTGGCGGAGGTCGG............................................................................................................................................................................................................................................................................................................................................................... 181.000.00--------------------------------------------------------------1.00----------------------------
.....................CCTCCCGGCCCCTATCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00-----------------------------------------------------------------1.00-------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCTCCACAGTCGGCCGGC........................................................................................................................................ 211.000.00-----------------------------------------1.00-------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTCTTCAGCTCTCAAA....................................................................................... 191.000.00--------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGGGCCGCCGTGGGCC............................... 191.000.00-----------------------------------------------------1.00-------------------------------------
.......................................................................................................................................................................................................................................................................................................................TAAACGATAGCTGATTTG.................................................................................................................................................................................................................................... 181.000.00-----------1.00-------------------------------------------------------------------------------
.........................................................................................................................................................CCCGGGTCTCCTGTGGT................................................................................................................................................................................................................................................................................................................................................................................................... 171.000.00---------------------------------------------------------------------------------------1.00---
.......................................................................................................................................................................................................................................................................................................................................................................................................................TCATGAGGCCGACTGTG..................................................................................................................................... 1711.001.00--------------------------------------------------------------------------1.00----------------
..........................................................GCTTTTCCTGTGGCCTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 181.000.00-1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCCCGCTCACGG......................... 1511.001.00--------------------------------------------------------------------1.00----------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCAGATGGGTGAGGC......................................................... 1720.500.50----------0.50--------------------------------------------------------------------------------
........................................................................................................................................................................................CCGCCAGGGCTAGGC...................................................................................................................................................................................................................................................................................................................................................................... 1530.330.33----0.33--------------------------------------------------------------------------------------