ID: uc010tvl.1_intron_3_0_chr14_77949011_r.3p
GENE: (2)
chr14:77948961-77949210-


(1)
B-CELL
(2)
BREAST
(5)
CELL-LINE
(1)
CERVIX
(6)
OTHER
(5)
SKIN

Sense strand
TGCACCTCCAGGCCGTAAGCTGTGATTCTTGTGCCCTAAGAGGCCAGGAAGGTTAGCCAAAAATGTCAGCCAAGAGAAGACAGCTGGTTTGAAGGAAAGGTTGGGCCTCTCACCTCTGACCCTGACCCCATCATCCCTCGTCTCTTTGGAATGCAGCTCTAAGACCTCCTTCACTGGCCGGCCTGGCCTGTCTCCTGCAGGTGACCATCAAGGTGGTGGAGGACCCCCAGGCCGAGGTGTCGATAGACCT
.......................................................................................................................................................(((((.....((((..........((((.....)))).)))).)))))...................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189784SRR343336SRR189782SRR343337SRR343334SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................................................GGAATGCAGCTCTAAATGG....................................................................................1928.000.0023.00-2.001.00---1.00------1.00-----
...................................................................................................................................................GGAATGCAGCTCTAAATG.....................................................................................187.000.003.00----2.001.00-----1.00-------
.................................................................................................................................................................................CCGGCCTGGCCTGTCTC........................................................1714.004.00-4.00------------------
...................................................................................................................................................GGAATGCAGCTCTAAGTGGG...................................................................................203.000.002.00--------------1.00----
...................................................................................................................................................GGAATGCAGCTCTAAGTGG....................................................................................192.000.001.00------------1.00------
.................................................................................................................................................TTGGAATGCAGCTCTAAGTG.....................................................................................201.000.001.00-------------------
...............................................................................................................................................CTTTGGAATGCAGCTGGA.........................................................................................181.000.00--------1.00-----------
....................................................................................................................................................GAATGCAGCTCTAAGTG.....................................................................................171.000.001.00-------------------
...................................................................................................................................................GGAATGCAGCTCTAAAT......................................................................................171.000.00----------1.00---------
..................................................................................................................................................TGGAATGCAGCTCTAAGTGG....................................................................................201.000.001.00-------------------
...................................................................................................................................................GGAATGCAGCTCTAAATA.....................................................................................181.000.001.00-------------------
..................................................................................................................................................TGGAATGCAGCTCTAAATGG....................................................................................201.000.00---1.00----------------
...................................................................................................................................................GGAATGCAGCTCTAAA.......................................................................................161.000.00----1.00---------------
....................................................................................................................................................GAATGCAGCTCTAAGTGGG...................................................................................191.000.001.00-------------------
...................................................................................................................................................GGAATGCAGCTCTAATTG.....................................................................................181.000.00-----------1.00--------
........................................................................AGAGAAGACAGCTGGTAAAG..............................................................................................................................................................201.000.00----1.00---------------
................................................................................................................................................TTTGGAATGCAGCTCT..........................................................................................1640.250.25------------------0.25-
.....................................................................................................................................................................................................CAGGTGACCATCAAGG.....................................1640.250.25----------------0.25---
......................................................................................................................................................................................CTGGCCTGTCTCCTGC....................................................1690.110.11-------------------0.11

Antisense strand
TGCACCTCCAGGCCGTAAGCTGTGATTCTTGTGCCCTAAGAGGCCAGGAAGGTTAGCCAAAAATGTCAGCCAAGAGAAGACAGCTGGTTTGAAGGAAAGGTTGGGCCTCTCACCTCTGACCCTGACCCCATCATCCCTCGTCTCTTTGGAATGCAGCTCTAAGACCTCCTTCACTGGCCGGCCTGGCCTGTCTCCTGCAGGTGACCATCAAGGTGGTGGAGGACCCCCAGGCCGAGGTGTCGATAGACCT
.......................................................................................................................................................(((((.....((((..........((((.....)))).)))).)))))...................................................
..............................................................................................................................................143......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189785SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR189784SRR343336SRR189782SRR343337SRR343334SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532874(GSM532874)
G699T. (cervix)
SRR191400(GSM715510)
37genomic small RNA (size selected RNA from t. (breast)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
....................................................................................................................................................................CCTCCTTCACTGGCCAAG.................................................................... 181.000.00---------1.00----------
.....................................................................................................................................................................................................................GGGGGTCCTCCACCA...................... 1540.250.25-----------------0.25--