ID: uc010tsl.1_intron_2_0_chr14_65392799_f.5p
GENE: (3)
chr14:65392749-65392998+


(1)
AGO2.ip
(1)
B-CELL
(1)
BREAST
(10)
CELL-LINE
(1)
CERVIX
(2)
HEART
(2)
LIVER
(3)
OTHER
(6)
SKIN
(1)
TESTES

Sense strand
ATGTAATAGCCAGACATGAGTATACATTCAGTATCATGGATGAATTTCAGGTAAATATAAATATGGGTATAAATATAAATATGGGGAGGTTAGGGGAATAATAAAAGTGCTCTTGAGAATCTAAATACGGTTTTCATAAGTGAAGTGCAAAGCGTTAGCATATATTAAAGGAGACTATGCCTTTTTTTTTTTTTTTTTTTGAGATGGTGTCTTGCTATGTTGCCCAGGCTGGTATTGAACTCCTGGGCTC
.............................................................................................................................................((((.(((..((....)).........((....)).)))))))..................................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189787SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTCTGG..................................................243.000.002.001.00-------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTCGAG.....................................................213.000.001.002.00-------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCTGC..............................................272.000.002.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCGGG..............................................272.000.002.00--------------------------
...........................................................................................................................................................................................................................TTGCCCAGGCTGGTATTGAACTCCG......252.000.00----1.00-----1.00----------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTCGG..................................................242.000.002.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCCG...............................................272.000.002.00--------------------------
..GTAATAGCCAGACATGAGTATACATTCAG...........................................................................................................................................................................................................................2912.002.00------2.00--------------------
........................................................................................................................................................................................................................ATGTTGCCCAGGCTGGTATTGAACTCCG......282.000.00----2.00----------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCTG...............................................272.000.001.001.00-------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTAGGG................................................262.000.002.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTGGTG..............................................281.000.00-1.00-------------------------
............................................................................................................................ATACGGTTTTCATAAGTGAAGCGC......................................................................................................241.000.00-1.00-------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCGGC..............................................281.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTCGTT...............................................271.000.001.00--------------------------
...............................................................................................................................................................................................................................CCAGGCTGGTATTGAACTTTG......211.000.00-----------1.00---------------
................................ATCATGGATGAATTTTTT........................................................................................................................................................................................................181.000.00--------------------1.00------
................TGAGTATACATTCAGTATCATGGA..................................................................................................................................................................................................................2411.001.00---------------------1.00-----
............................................................................................................................................................................................................................TGCCCAGGCTGGTATTGAACTCCG......241.000.00-------------------------1.00-
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTGGGC..............................................271.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTGGGG..............................................271.000.001.00--------------------------
....................TATACATTCAGTATCATG....................................................................................................................................................................................................................1811.001.00--------------1.00------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCCGG..............................................281.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTCGCC...............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTCCCC................................................261.000.00-1.00-------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTCGAG......................................................201.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTGGGC.......................................................191.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTGGGAC.............................................281.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCTGG..............................................281.000.00-1.00-------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTCCCG..................................................231.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCCC...............................................271.000.001.00--------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTAAAG.................................................261.000.00-----1.00---------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTACG...............................................271.000.00-1.00-------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTGGTC..................................................251.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTCCT...................................................231.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTGGGC..............................................281.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTCTTG.................................................251.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTGCCA..............................................281.000.001.00--------------------------
..........CAGACATGAGTATACATTCAGT..........................................................................................................................................................................................................................2211.001.00------------------------1.00--
........................................................................................................................................................................................................................ATGTTGCCCAGGCTGGTATTGAACTCCTG.....2901.001.00-------------1.00-------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTAGTG..............................................271.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCTCC..............................................271.000.001.00--------------------------
....................................................................................................................................................................................CTTTTTTTTTTTTTTTTTTTGAGATGGTTG........................................301.000.001.00--------------------------
................................................................................................................................................................................................................................CAGGCTGGTATTGAACTCAAA.....211.000.00------------1.00--------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTATG...............................................261.000.00-1.00-------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTCGG.................................................251.000.001.00--------------------------
...TAATAGCCAGACATGAGA.....................................................................................................................................................................................................................................181.000.00------------------1.00--------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTCGGC...............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTGGGG..............................................281.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTCGGC..................................................231.000.001.00--------------------------
..............................................................................................................................................................................................................................CCCAGGCTGGTATTGAACTCCTG.....2301.001.00----------------1.00----------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCAAA..............................................281.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCCCG..............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTAGTG................................................261.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTCGG...................................................221.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTCGA.................................................251.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTGGC...............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTCTC...............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTTAGG...............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTCGTG.....................................................211.000.00-------1.00-------------------
..................................................................................................................................................................................GCCTTTTTTTTTTTTTTTTTTTGGGGC.............................................271.000.001.00--------------------------
...................................................................................................................................................................................................................TTGCTATGTTGCCCAGGGGAC..................211.000.001.00--------------------------
....AATAGCCAGACATGAGT.....................................................................................................................................................................................................................................1711.001.00-----------------------1.00---
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCGG...............................................261.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTTTTCGG................................................261.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTCG....................................................221.000.001.00--------------------------
...................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTGATAA.............................................261.000.00-------1.00-------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCAAA..............................................271.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTCGC...............................................261.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTCGGG..................................................231.000.001.00--------------------------
...........................................................................................................................................................................AGACTATGCCTTTTTTTTTTTTTTTCGAG..................................................291.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTGGTG..................................................241.000.001.00--------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTGCCC..................................................251.000.00-1.00-------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTTTCTT................................................271.000.00-1.00-------------------------
..............................................................................................................................................................................CTATGCCTTTTTTTTTTTTTTCGAG...................................................251.000.00-----1.00---------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTAGGG...................................................231.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTGAT........................................................181.000.001.00--------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTTCC..................................................251.000.00-1.00-------------------------
..............................GTATCATGGATGAATTTCAGGAGT....................................................................................................................................................................................................241.000.00--------1.00------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTAAAA..............................................271.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTTCCCC..................................................241.000.001.00--------------------------
................................................................................................................................................................................ATGCCTTTTTTTTTTTTTTAGTG...................................................231.000.00-1.00-------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTTTCGGG...............................................281.000.00-----1.00---------------------
............................CAGTATCATGGATGAATTTCAG........................................................................................................................................................................................................2211.001.00----1.00----------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTCGG..................................................251.000.001.00--------------------------
.................................................................................................................................................................................TGCCTTTTTTTTTTTTTTTTTTTGTTC..............................................271.000.00-1.00-------------------------
...........AGACATGAGTATACA................................................................................................................................................................................................................................1570.140.14--------------------------0.14
.......................................................................................................................................................................................................TGAGATGGTGTCTTGCTA.................................1870.140.14-0.14-------------------------

Antisense strand
ATGTAATAGCCAGACATGAGTATACATTCAGTATCATGGATGAATTTCAGGTAAATATAAATATGGGTATAAATATAAATATGGGGAGGTTAGGGGAATAATAAAAGTGCTCTTGAGAATCTAAATACGGTTTTCATAAGTGAAGTGCAAAGCGTTAGCATATATTAAAGGAGACTATGCCTTTTTTTTTTTTTTTTTTTGAGATGGTGTCTTGCTATGTTGCCCAGGCTGGTATTGAACTCCTGGGCTC
.............................................................................................................................................((((.(((..((....)).........((....)).)))))))..................................................................
.......................................................................................................................120.............................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)
SRR189787SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR553576(SRX182782)
source: Testis. (testes)
SRR343335SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTTACG................................................. 263.000.00--3.00------------------------
.........................................................................................................................................................................................................................TGTTGCCCAGGCTGGTATGTG............ 212.000.00-2.00-------------------------
..........................................................................................................................................................................................................GATGGTGTCTTGCTATGTTGT........................... 211.000.00---1.00-----------------------
................................................................................................................................................................................................................................CAGGCTGGTATTGAACTACC...... 201.000.00-------------------1.00-------
.........................................................................................................................................................................................................AGATGGTGTCTTGCTATGTTGTA.......................... 231.000.00---1.00-----------------------
..........................................................................................................................................................................................................GATGGTGTCTTGCTATGTTGAT.......................... 221.000.00---1.00-----------------------
.............................................................................................................................................................................ACTATGCCTTTTTTTTTTTTTTTTTGT.................................................. 271.000.00--1.00------------------------
.........................................................................................................................................................................................................AGATGGTGTCTTGCTATGTTGTAA......................... 241.000.00---------1.00-----------------
.........................................................................................................................................................................................................AGATGGTGTCTTGCTATGTTGAAA......................... 241.000.00-----------------1.00---------
.............................................................................................GGGAATAATAAAAGTGAG........................................................................................................................................... 181.000.00----------------------1.00----
..........................................................................................................................................................................................................GATGGTGTCTTGCTATGTTGGT.......................... 221.000.00---1.00-----------------------
.........................................................................................................................................................................................................................TGTTGCCCAGGCTGGTATTGAGCA......... 241.000.00-1.00-------------------------
...............................................................................................................................................................................TATGCCTTTTTTTTTTTTTTTTACG.................................................. 251.000.00--1.00------------------------
................................ATCATGGATGAATTTCACTGC..................................................................................................................................................................................................... 211.000.00---------------1.00-----------
..................................................................................................................................................................................................................................GGCTGGTATTGAACTCCTCGGA.. 221.000.00-1.00-------------------------