ID: uc010tql.1_intron_14_0_chr14_50628328_r.5p
GENE: (7)
chr14:50647090-50647339-


(1)
B-CELL 		(1)
BRAIN 		(8)
BREAST 		(10)
CELL-LINE 		(1)
FIBROBLAST 		(3)
HEART 		(1)
HELA 		(2)
LIVER 		(2)
OTHER 		(7)
SKIN 		(1)
TESTES

Sense strand
AACATTTCAATAAATTGATGGCCAGACCTGCAGTTGCTCTACACTTTCAGGTAAACTTAAATTGAAGGTTTTTTTTTTTTTTTTTTTTAATAAAGCAAATAAATATCTCACTATTTTATCCTTCAAATATTTGTAATTCTGGAATCCTCGTAATCCTTCAAATCTTGTTCATTCTAAACCTGTTTTGGATTATCTTCTGTTTTCTCTCTGGAGTTCTGTCTGTTCTTATTGTAGAAATCTTTTATAGTAC
.............................................................(((((((.................((((..........))))................)))))))............................................................................................................................
...........................................................60......................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAATTC.............................................................................................................................................................2814.000.0014.00---------------------------------------
...........AAATTGATGGCCAGACCTGCAGT........................................................................................................................................................................................................................2315.005.00--5.00-------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTCCCC..................................................................................................................................................................245.000.005.00---------------------------------------
............AATTGATGGCCAGACCTGCAGT........................................................................................................................................................................................................................2214.004.00----1.00----1.00-------------------1.00---1.00------
.........................ACCTGCAGTTGCTCTACACTTT...........................................................................................................................................................................................................2213.003.00--------------1.00---1.00--1.00------------------
............AATTGATGGCCAGACCTGCAGTT.......................................................................................................................................................................................................................2312.002.00--------1.00----------------------1.00--------
.ACATTTCAATAAATTGATGGCCAGACCTGCAG.........................................................................................................................................................................................................................3212.002.00-------2.00--------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAATTCTG...........................................................................................................................................................302.000.001.001.00--------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTGGG................................................................................................................................................................262.000.002.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTGCC................................................................................................................................................................262.000.001.001.00--------------------------------------
..........................CCTGCAGTTGCTCTACACTTT...........................................................................................................................................................................................................2112.002.00------------------------1.00------------1.00--
............AATTGATGGCCAGACCTGCA..........................................................................................................................................................................................................................2012.002.00--------1.00------------------1.00------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTCTCC...............................................................................................................................................................272.000.001.001.00--------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTAGGG...............................................................................................................................................................262.000.001.001.00--------------------------------------
.........................................................................................................................TTCAAATATTTGTAATTCTGGAA..........................................................................................................2312.002.00----1.00------------------------------1.00----
................................................................AAGGTTTTTTTTTTTTTTTTCACT..................................................................................................................................................................241.000.001.00---------------------------------------
..............................................................TGAAGGTTTTTTTTTTTTTTTTTCCC..................................................................................................................................................................261.000.001.00---------------------------------------
..............................................................TGAAGGTTTTTTTTTTTTTTGCC.....................................................................................................................................................................231.000.00-1.00--------------------------------------
..............................................................TGAAGGTTTTTTTTTTTTTTTTTTTCTT................................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTCTTG................................................................................................................................................................261.000.00---1.00------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTAGG................................................................................................................................................................261.000.00-1.00--------------------------------------
............AATTGATGGCCAGACCTGCGGT........................................................................................................................................................................................................................221.000.00-------------1.00--------------------------
..........................CCTGCAGTTGCTCTAC................................................................................................................................................................................................................1611.001.00---------------1.00------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAAATTC............................................................................................................................................................291.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAGGC..............................................................................................................................................................271.000.001.00---------------------------------------
..................................................................GGTTTTTTTTTTTTTTTTTTTTAATAAG............................................................................................................................................................281.000.00---1.00------------------------------------
..........................CCTGCAGTTGCTCTACACTTTCAGT.......................................................................................................................................................................................................251.000.00----------------------------1.00-----------
...............................................................GAAGGTTTTTTTTTTTTTTTTAAAC..................................................................................................................................................................251.000.00---1.00------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTAGCT...............................................................................................................................................................261.000.00-1.00--------------------------------------
........................................................................TTTTTTTTTTTTTTTTAATAAAATTG........................................................................................................................................................261.000.00-----1.00----------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTACC................................................................................................................................................................261.000.001.00---------------------------------------
....................................................................TTTTTTTTTTTTTTTTTTTTAATAAAATTG........................................................................................................................................................301.000.00-----1.00----------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTCTTT..............................................................................................................................................................281.000.001.00---------------------------------------
..............................................................TGAAGGTTTTTTTTTTTTTTTTTCTT..................................................................................................................................................................261.000.001.00---------------------------------------
.ACATTTCAATAAATTGATGG.....................................................................................................................................................................................................................................2011.001.00--------------------------1.00-------------
................................................................AAGGTTTTTTTTTTTTTTTTTGGG..................................................................................................................................................................241.000.00-1.00--------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTCTC.................................................................................................................................................................251.000.00-1.00--------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAGCC..............................................................................................................................................................271.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTAATG...............................................................................................................................................................261.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTCTC...............................................................................................................................................................271.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTAGCC...............................................................................................................................................................261.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAATAG.............................................................................................................................................................291.000.00---1.00------------------------------------
........................................................................................................................CTTCAAATATTTGTAATTCTGGAA..........................................................................................................2411.001.00-----------1.00----------------------------
...............TGATGGCCAGACCTGCAGTTGCTCTAC................................................................................................................................................................................................................2711.001.00----------------1.00-----------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAGGTT.............................................................................................................................................................291.000.00-1.00--------------------------------------
..................................................................GGTTTTTTTTTTTTTTTTTTTTATTTG.............................................................................................................................................................271.000.001.00---------------------------------------
............AATTGATGGCCAGACCTGCAGA........................................................................................................................................................................................................................221.000.00------------1.00---------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTACCC...............................................................................................................................................................261.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTATT................................................................................................................................................................251.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTCGG...............................................................................................................................................................271.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTATTT...............................................................................................................................................................261.000.00-1.00--------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAGGC..............................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTCATC..............................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTCCGG..................................................................................................................................................................241.000.001.00---------------------------------------
......................................................................TTTTTTTTTTTTTTTTTTAATAAAAATG........................................................................................................................................................281.000.00--------------------------------------1.00-
..............................................................TGAAGGTTTTTTTTTTTTTTTTTTTTTTTC..............................................................................................................................................................301.000.001.00---------------------------------------
...................................................................GTTTTTTTTTTTTTTTTTTTTATTTG.............................................................................................................................................................261.000.00-----1.00----------------------------------
...................................................................................................................................................TCGTAATCCTTCAAATTGT....................................................................................191.000.00-------------------------1.00--------------
.................ATGGCCAGACCTGCAGTTGCT....................................................................................................................................................................................................................2111.001.00--------------------------------1.00-------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAACTC.............................................................................................................................................................281.000.001.00---------------------------------------
..............................................................TGAAGGTTTTTTTTTTTTGCC.......................................................................................................................................................................211.000.00-1.00--------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAGAGG.............................................................................................................................................................281.000.00-1.00--------------------------------------
...........................CTGCAGTTGCTCTACACTTTCAGT.......................................................................................................................................................................................................241.000.00-----------------------1.00----------------
..............................................................TGAAGGTTTTTTTTTTTTTTTAACC...................................................................................................................................................................251.000.001.00---------------------------------------
................................................................................................................................................................................................................TGGAGTTCTGTCTGTGCA........................181.000.00-----------------1.00----------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTAC.................................................................................................................................................................251.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTATT...............................................................................................................................................................271.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAATTCT............................................................................................................................................................301.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTCATC..................................................................................................................................................................231.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAATC..............................................................................................................................................................281.000.001.00---------------------------------------
........................................................................................................................................................................................................................TGTCTGTTCTTATTGTAGAAATCTG.........251.000.00-------------------1.00--------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAACCT.............................................................................................................................................................281.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTATATT.............................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAACC..............................................................................................................................................................281.000.001.00---------------------------------------
.............................................................TTGAAGGTTTTTTTTTTTTTTTTTTTTCT................................................................................................................................................................291.000.00-1.00--------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTTAAGT..............................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTGCT................................................................................................................................................................261.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTCATC................................................................................................................................................................261.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTCGGA..................................................................................................................................................................231.000.001.00---------------------------------------
............AATTGATGGCCAGACCTGCAGTTGCTCT..................................................................................................................................................................................................................2811.001.00----------1.00-----------------------------
.................................................................AGGTTTTTTTTTTTTTTTTCGAA..................................................................................................................................................................231.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAGAGC.............................................................................................................................................................281.000.001.00---------------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTATC................................................................................................................................................................261.000.001.00---------------------------------------
..................................................................................................................................................................TCTTGTTCATTCTAATGA......................................................................181.000.00--------------------1.00-------------------
..........................CCTGCAGTTGCTCTACACTTTC..........................................................................................................................................................................................................2211.001.00---------1.00------------------------------
...............................................................GAAGGTTTTTTTTTTTTTTTTTCGAG.................................................................................................................................................................261.000.001.00---------------------------------------
..............................................................................................................................ATATTTGTAATTCTGGAA..........................................................................................................1811.001.00----1.00-----------------------------------
................................................................AAGGTTTTTTTTTTTTTTTTTTTCTC................................................................................................................................................................261.000.00-1.00--------------------------------------
..................TGGCCAGACCTGCAGTTGCTCTACACCC............................................................................................................................................................................................................281.000.00-1.00--------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTAATTCT............................................................................................................................................................291.000.001.00---------------------------------------
.................................................................AGGTTTTTTTTTTTTTTTTTTTTATATC.............................................................................................................................................................281.000.001.00---------------------------------------
.................................TTGCTCTACACTTTCAG........................................................................................................................................................................................................1730.330.33---------------------------------------0.33

Antisense strand
AACATTTCAATAAATTGATGGCCAGACCTGCAGTTGCTCTACACTTTCAGGTAAACTTAAATTGAAGGTTTTTTTTTTTTTTTTTTTTAATAAAGCAAATAAATATCTCACTATTTTATCCTTCAAATATTTGTAATTCTGGAATCCTCGTAATCCTTCAAATCTTGTTCATTCTAAACCTGTTTTGGATTATCTTCTGTTTTCTCTCTGGAGTTCTGTCTGTTCTTATTGTAGAAATCTTTTATAGTAC
.............................................................(((((((.................((((..........))))................)))))))............................................................................................................................
...........................................................60......................................................................................148....................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191428(GSM715538)
160genomic small RNA (size selected RNA from . (breast)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		TAX577740(Rovira)
total RNA. (breast)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR191631(GSM715741)
75genomic small RNA (size selected RNA from t. (breast)		SRR191481(GSM715591)
43genomic small RNA (size selected RNA from t. (breast)		SRR189785SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577742(Rovira)
total RNA. (breast)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR553576(SRX182782)
source: Testis. (testes)		TAX577579(Rovira)
total RNA. (breast)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		TAX577453(Rovira)
total RNA. (breast)		SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
....................................................................................................AAATATCTCACTATTTTATGTAA............................................................................................................................... 231.000.00------------------------------1.00---------
........................................................................................AATAAAGCAAATAAATATTC.............................................................................................................................................. 201.000.00---1.00------------------------------------
...............................................................................................................................................................................................................................TCTTATTGTAGAAATCGAA........ 191.000.00----------------------1.00-----------------
..................................TGCTCTACACTTTCACCGA..................................................................................................................................................................................................... 191.000.00------------------------------------1.00---
........................................................................TTTTTTTTTTTTTTTTAATAATTTT......................................................................................................................................................... 251.000.00------1.00---------------------------------
.......................................................................TTTTTTTTTTTTTTTTTAATAATTT.......................................................................................................................................................... 251.000.00------1.00---------------------------------
...............................................................GAAGGTTTTTTTTTTTTTTTTTTGGCT................................................................................................................................................................ 271.000.00----------------------------------1.00-----