ID: uc010tok.1_intron_8_0_chr14_24845308_f
GENE: (9)
chr14:24845258-24845549+


(2)
AGO2.ip 		(3)
BRAIN 		(5)
BREAST 		(14)
CELL-LINE 		(2)
CERVIX 		(2)
FIBROBLAST 		(4)
HEART 		(1)
LIVER 		(1)
OTHER 		(16)
SKIN 		(2)
UTERUS

Sense strand
CAATGGGCGGAGGAAACGCAGTCCTACCCAGAGTTTCAGGTTTCTGCCTGGTGCGCTCTGGGACAGCCCATGGTGGGGGTATAGGGATATGGGGAGCTGGAGCAGGAGCAGAGGGAAGCAGTACTCATCATGAGGGGCCAAGGGGTGAATGGAACCTGGGAGGAGCAGGCAGCTGGAAGGTGTGCAGTGGGGAGACTACCAGACCTCTCACCAGCATGTCCTCCCACTTCCTGTCTTCCCAGTGATCTGCAAAGAGGAGCCCCTACCGGACTCATCTCTGCGGGGTTTCCCT
........................................................................................................................................................................((((((((.((((.((..((((.....)))))).))))....))))).))).........................................................................
........................................................................................................................................................................169.............................................................233.........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040030(GSM532915)
G013N. (cervix)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR189783SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTT...............................................................22112.0012.004.00--1.00----------1.00-1.00-----1.00----1.00--1.00----------------1.001.00-------
.............................................................................................................................................................................................................................TCCCACTTCCTGTCTTCCCAGT.................................................22111.0011.00--3.00----2.00---2.00---1.00---1.001.00----------1.00------------------------
.............................................................................................................................................................................TGGAAGGTGTGCAGTGGGGAGA.................................................................................................2217.007.00-2.00-------2.00-------------1.00--1.00-------------------1.00---------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACT................................................................2115.005.001.00-----------1.001.00--------------------1.00------1.00--------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTT..............................................................2313.0012.003.00-------------------------------------------------------
............................................................................................................................................................................CTGGAAGGTGTGCAGTGGGGAGA.................................................................................................2313.003.00--------1.00-2.00---------------------------------------------
............................................................................................................................................................................CTGGAAGGTGTGCAGTGGGGAGT.................................................................................................2313.001.00-3.00------------------------------------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCAC.................................................................2012.002.001.00------------------------1.00------------------------------
.............AAACGCAGTCCTACCCAGAGTTTCAGGTTTCTG......................................................................................................................................................................................................................................................3311.001.00----1.00---------------------------------------------------
.......................................................................................................................................................................................................................................................TGCAAAGAGGAGCCCCTACCGG.......................2211.001.00---------------------------------------------------1.00----
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTAAA............................................................2511.0012.001.00-------------------------------------------------------
............................................................................................................................................................................CTGGAAGGTGTGCAGTGGGGAG..................................................................................................2211.001.00-----1.00--------------------------------------------------
.........................................................................................................................................................................................................................................................CAAAGAGGAGCCCCTACCGGA......................2111.001.00-----------------------------1.00--------------------------
..........................................................................................................................................................CCTGGGAGGAGCAGGCAGCTGGAT..................................................................................................................241.000.00--------1.00-----------------------------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTAA.............................................................2411.0012.001.00-------------------------------------------------------
.............................................................................................................................................................................TGGAAGGTGTGCAGTGG......................................................................................................1711.001.00------------------------------------------1.00-------------
..........................................................................................................AGCAGAGGGAAGCAGTACGCG.....................................................................................................................................................................211.000.00-----------------------------------1.00--------------------
...............................................................................................GCTGGAGCAGGAGCAGATCA.................................................................................................................................................................................201.000.00---------------------------------------1.00----------------
...........................................................................................................GCAGAGGGAAGCAGTACTCA.....................................................................................................................................................................2011.001.00----------------------------------------1.00---------------
...........................................................................................................................................................................GCTGGAAGGTGTGCAGTAAA.....................................................................................................201.000.00-----------------1.00--------------------------------------
............................................................................................................................................................................CTGGAAGGTGTGCAGTGGGGA...................................................................................................2111.001.00----------------------------------------------------1.00---
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACA................................................................2111.002.001.00-------------------------------------------------------
........................................................................................................................................................................................................................................................................ACCGGACTCATCTCTGCGGGGT......2211.001.00------1.00-------------------------------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTAT.............................................................2411.0012.001.00-------------------------------------------------------
..................................................GTGCGCTCTGGGACAGCCCATGGT..........................................................................................................................................................................................................................2411.001.00----1.00---------------------------------------------------
....................................................................CATGGTGGGGGTATAGGGA.............................................................................................................................................................................................................1911.001.00--------------------------------------------------1.00-----
.............................AGAGTTTCAGGTTTCTACCC...................................................................................................................................................................................................................................................201.000.001.00-------------------------------------------------------
.................................................GGTGCGCTCTGGGACGCT.................................................................................................................................................................................................................................181.000.00------------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................CCCTACCGGACTCATCTCT.............1911.001.00----------------------------1.00---------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTAT..............................................................2311.005.001.00-------------------------------------------------------
................................................................................................................................................................................................................................................................................CATCTCTGCGGGGTTTCC..1811.001.00--------------------------------------------1.00-----------
.............................................................................................................................................................................TGGAAGGTGTGCAGTGGA.....................................................................................................1811.001.00---------------------------------------------1.00----------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTC..............................................................2311.001.00------------------------------------1.00-------------------
............................................................................................................................................................................CTGGAAGGTGTGCAGTGGGG....................................................................................................2011.001.00------------------------1.00-------------------------------
....................................................................................................................................................................GCAGGCAGCTGGAAGAAG..............................................................................................................181.000.00-------------------------------------------1.00------------
.............................................................................................................................................................................TGGAAGGTGTGCAGTGGGGA...................................................................................................2011.001.00-----1.00--------------------------------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACCTCT.............................................................2411.002.00--------------------------------------1.00-----------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCAA.................................................................201.000.00---1.00----------------------------------------------------
...............................................................................................................................................................................................................TCACCAGCATGTCCTCCCACTTCA.............................................................2411.001.00------1.00-------------------------------------------------
......................................................................................................CAGGAGCAGAGGGAAGC.............................................................................................................................................................................1770.140.14------------0.14-------------------------------------------
..........................................................................................................................................................................AGCTGGAAGGTGTGC...........................................................................................................1590.110.11-------------------------------------------------------0.11

Antisense strand
CAATGGGCGGAGGAAACGCAGTCCTACCCAGAGTTTCAGGTTTCTGCCTGGTGCGCTCTGGGACAGCCCATGGTGGGGGTATAGGGATATGGGGAGCTGGAGCAGGAGCAGAGGGAAGCAGTACTCATCATGAGGGGCCAAGGGGTGAATGGAACCTGGGAGGAGCAGGCAGCTGGAAGGTGTGCAGTGGGGAGACTACCAGACCTCTCACCAGCATGTCCTCCCACTTCCTGTCTTCCCAGTGATCTGCAAAGAGGAGCCCCTACCGGACTCATCTCTGCGGGGTTTCCCT
........................................................................................................................................................................((((((((.((((.((..((((.....)))))).))))....))))).))).........................................................................
........................................................................................................................................................................169.............................................................233.........................................................
SizePerfect hitTotal NormPerfect NormSRR189782SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR038854(GSM458537)
MM653. (cell line)		SRR037938(GSM510476)
293Red. (cell line)		GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR040030(GSM532915)
G013N. (cervix)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		SRR037935(GSM510473)
293cand3. (cell line)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR189787SRR189783SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)		GSM956925PAZD5SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR191450(GSM715560)
145genomic small RNA (size selected RNA from . (breast)		GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR189786SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)		TAX577589(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR363673(GSM830250)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)		SRR029125(GSM416754)
U2OS. (cell line)		SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)		SRR444054(SRX128902)
Sample 14cDNABarcode: AF-PP-342: ACG CTC TTC . (skin)
.......................................................CTCTGGGACAGCCCATAGC.......................................................................................................................................................................................................................... 191.000.00-------------------------------------------------1.00------
............................................................................................................................................................TGGGAGGAGCAGGCACTG...................................................................................................................... 181.000.00--------------------------------1.00-----------------------
.........................................................................................................................................................................................................................GTCCTCCCACTTCCTTCTG........................................................ 191.000.00---------------------1.00----------------------------------
.TTTCCTCCGCCCATT.................................................................................................................................................................................................................................................................................... 1521.001.00-------------------------------------1.00------------------
...........................................................................................................................................................................................................................................................CCGGTAGGGGCTCCTCTT....................... 1811.001.00---------------------------------1.00----------------------
..................................................................................................CCCTCTGCTCCTGCTCC................................................................................................................................................................................. 1770.290.29-----------------------------------------------------0.29--
................CTGGGTAGGACTGCG..................................................................................................................................................................................................................................................................... 1550.200.20------------------------------------------------------0.20-