ID: uc010tlh.1_intron_11_0_chr14_20846695_r
GENE: TEP1(8)
chr14:20846645-20846962-


(2)
AGO1.ip
(2)
AGO2.ip
(1)
AGO3.ip
(2)
B-CELL
(3)
BRAIN
(8)
BREAST
(10)
CELL-LINE
(2)
CERVIX
(7)
HEART
(5)
HELA
(1)
KIDNEY
(1)
LIVER
(2)
OTHER
(31)
SKIN

Sense strand
GCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAGGATGCCTAAAGGTAAGACTTGGGGTCTGCAGTGGTCAGAGTGGCCCTGAGCCATGACTCACCCTCGTGAATTTGTTCTCTCAGTGCGGCAGAGGCTGCTGACTCCCTGGCCAGAGAAGGCCTTCCCTGCTGAGGGCAGGGTAACTGGACAAGGTTGCTCCTGGAGGTCTGGGACTGAGAAGTTCAGGCATCTCTCTTCAGCATCCTGATTCCTCCTCTCTCTCCCTCAGCTGTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAA
.........................................................................................................................................................................................................((((...((((..(((.((.(((((.((((......)).)))))))...)).)))..))))))))....................................................
........................................................................................................................................................................................................201......................................................................274..........................................
SizePerfect hitTotal NormPerfect NormGSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGC...........................................................................................22145.0045.00-4.00-1.003.002.003.003.002.00--2.001.001.00---1.002.00-1.00--1.00-----1.001.001.00-1.001.001.001.00-1.00--1.00-----------1.00-1.001.001.00----1.001.00-1.00-1.001.00---
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGCA..........................................................................................23119.0019.0012.00---------------2.00----1.00----------1.00----------------1.00----1.00---1.00-------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGG............................................................................................2119.009.00--1.00------1.00---1.00-----------------------1.00--1.00-----1.00----1.00--------1.00--------1.00--
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGCAT.........................................................................................2418.008.00--3.00-------2.00------1.00--------1.00------------------1.00--------------------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGCATC........................................................................................2515.005.00---------------2.00---1.00----1.00-----------------------------------------1.00-----
...............................................................................................................................................................................................................TGGGACTGAGAAGTTCAGGCAT.........................................................................................2213.003.00---1.00---------------1.001.00---------------------------------------------------
.......................................................................................................................................................................................................................................................TTCCTCCTCTCTCTCCCTCAGAT................................................232.000.00--------------2.00---------------------------------------------------------
.......................................................................................................................................................................................................TGGAGGTCTGGGACTGAGAAG..................................................................................................2112.002.00---1.00----------------------------------------------1.00---------------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGA...........................................................................................2211.009.00--------1.00---------------------------------------------------------------
..................................................................................................................................AGGCTGCTGACTCCCTGGCCAGAGAAGG................................................................................................................................................................2811.001.00----------------------1.00-------------------------------------------------
...............................................................................................................................................................................................................TGGGACTGAGAAGTTCAGGCATCA.......................................................................................2411.001.00--------------------------------------------1.00---------------------------
...............................................................................................................................................................................................................TGGGACTGAGAAGTTCAGGCATC........................................................................................2311.001.00-----------------------------------------------1.00------------------------
.......................................................................................................................................................................................................................................................TTCCTCCTCTCTCTCCCTCAGT.................................................221.000.00----------------------------1.00-------------------------------------------
.............................................................................................................................................................................................................................................................................TGTGGGACACAGTCCGTGGGCAGCTGGCC....................2911.001.00-----------------------------------------------------------1.00------------
........................................................................................................................................................................TGAGGGCAGGGTAACTCTG...................................................................................................................................191.000.00-1.00----------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGATTCCTCCTCTCTGATT.......................................................191.000.00------------------------------------------------1.00-----------------------
.........................................................................................................................................................................................................................................CTTCAGCATCCTGATTCCTCCTCT.............................................................2411.001.00------------1.00-----------------------------------------------------------
...............................................................................................................................................................................................................TGGGACTGAGAAGTTCAGGCATAT.......................................................................................2411.003.00---------1.00--------------------------------------------------------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGCAG.........................................................................................2411.0019.00------------------------------------------1.00-----------------------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGTTCAGGT...........................................................................................2211.009.00----------------------------------------------------1.00-------------------
.................................................................................................................................................................................................TGCTCCTGGAGGTCTGGGACTGAGAAGTCTG..............................................................................................311.000.00---------------------------------------1.00--------------------------------
...............................................................................................................................................................................................................................................................CTCTCTCCCTCAGCTGT..............................................1780.250.25---------------------0.25--------------------------------------------------
.......................................................................................................................CAGTGCGGCAGAGGC........................................................................................................................................................................................1550.200.20---------0.20--------------------------------------------------------------
.............................................................................................................................................................................................................TCTGGGACTGAGAAGT.................................................................................................1680.120.12-----------------------------------------------------------------------0.12
................................................................................................................................................................................................................GGGACTGAGAAGTTC...............................................................................................1580.120.12-0.12----------------------------------------------------------------------

Antisense strand
GCCCAGACTGCCGGCTGCTAGCCACCGTGTGCTTGGGAGGATGCCTAAAGGTAAGACTTGGGGTCTGCAGTGGTCAGAGTGGCCCTGAGCCATGACTCACCCTCGTGAATTTGTTCTCTCAGTGCGGCAGAGGCTGCTGACTCCCTGGCCAGAGAAGGCCTTCCCTGCTGAGGGCAGGGTAACTGGACAAGGTTGCTCCTGGAGGTCTGGGACTGAGAAGTTCAGGCATCTCTCTTCAGCATCCTGATTCCTCCTCTCTCTCCCTCAGCTGTGGGACACAGTCCGTGGGCAGCTGGCCTTCCAGCACACCTACCCCAA
.........................................................................................................................................................................................................((((...((((..(((.((.(((((.((((......)).)))))))...)).)))..))))))))....................................................
........................................................................................................................................................................................................201......................................................................274..........................................
SizePerfect hitTotal NormPerfect NormGSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR040040(GSM532925)
G612N. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR553575(SRX182781)
source: Kidney. (Kidney)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR343332(GSM796035)
"KSHV (HHV8), EBV (HHV-4)". (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191433(GSM715543)
170genomic small RNA (size selected RNA from . (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577742(Rovira)
total RNA. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
TAX577589(Rovira)
total RNA. (breast)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR038863(GSM458546)
MM603. (cell line)
GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR553574(SRX182780)
source: Heart. (Heart)
TAX577743(Rovira)
total RNA. (breast)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
......................................................................................................................................................................................CTGGACAAGGTTGCTGGCG..................................................................................................................... 191.000.00----------------------------------------------------------------------1.00-
..............................................................................................................................................................................................................................................................TCTCTCTCCCTCAGCTGA.............................................. 181.000.00-------------------------------------------1.00----------------------------
...........................................................................................................................GCGGCAGAGGCTGCTCGT................................................................................................................................................................................. 181.000.00---------------------------1.00--------------------------------------------
....................................................................................................................................................CCAGAGAAGGCCTTCTCGT....................................................................................................................................................... 191.000.00-------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................................................................CTCTCTCCCTCAGCTGGC............................................. 181.000.00-----1.00------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGATTCCTCCTCTCTAAA........................................................ 181.000.00-------------------------1.00----------------------------------------------
...........................................................................................................................................................................................................................................................TCCTCTCTCTCCCTCAAGGA............................................... 201.000.00----------------------------------------------------------------1.00-------