ID: uc010tgq.1_intron_2_0_chr13_52400762_r.3p
GENE: LINC00282(2)
chr13:52400712-52400961-


(3)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(6)
CELL-LINE 		(6)
CERVIX 		(1)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(3)
OTHER 		(1)
RRP40.ip 		(6)
SKIN 		(1)
TESTES 		(4)
UTERUS

Sense strand
AGCTCTCTGAGAAGTGCAAGTCTTGGCTTGCATCCACTGTGTGGGAGCCCCAGGCGAGCTGCGACCTTCTCCTCCTGTCTGCTGACTTGCCACTGGAGAGAAAGTCAGGTTTCACAGGATGCTTAAGAAACTGCAGTGAAGAGGAAATGCAGGGGTCTGTGTGTTTCTAACCCAGTGCCTGCCCCTTCTTCTCCTTGCAGCCTGCTTCGTTGTTGTGCTCTGTGCTTTCCTGGCTCTGCCGCTGTCCATG
..........................................................................................((((((..(((((.((...((((((....(((..........)))))))))..)).((((((....)))))).)))))...)))))).........................................................................
........................................................................................89......................................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787SRR189782SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532878(GSM532878)
G691T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		GSM532885(GSM532885)
G850N. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
.............................................................................................TGGAGAGAAAGTCAGTTCC..........................................................................................................................................1954.000.0014.007.0011.00-7.006.003.00------1.001.00------1.001.00-----1.001.00--------
.............................................................................................TGGAGAGAAAGTCAGTTC...........................................................................................................................................1841.000.0015.0011.00-6.002.00---2.00-----------1.00---1.00--1.00---1.00--1.00---
.............................................................................................TGGAGAGAAAGTCAGTT............................................................................................................................................1724.000.0012.004.002.004.00------------1.00----------------1.00----
.............................................................................................TGGAGAGAAAGTCAGGTCCTG........................................................................................................................................2113.001.001.00--------1.00----------------------1.00-----
.............................................................................................TGGAGAGAAAGTCAGGTCCT.........................................................................................................................................2013.001.002.00-1.00-----------------------------------
.............................................................................................TGGAGAGAAAGTCAGGTC...........................................................................................................................................1813.001.00-1.001.001.00----------------------------------
.............................................................................................TGGAGAGAAAGTCAGGTCC..........................................................................................................................................1912.001.001.001.00------------------------------------
.............................................................................................TGGAGAGAAAGTCAGTTT...........................................................................................................................................181.000.00---1.00----------------------------------
..........................................................................................................................................................GTCTGTGTGTTTCTATATG.............................................................................191.000.00----------1.00---------------------------
.......................................................................................................................................GTGAAGAGGAAATGCAGGGGTCTGT..........................................................................................2511.001.00------------------------------------1.00-
........................................................................................................................................................................................CTTCTTCTCCTTGCACAAC...............................................191.000.00----------1.00---------------------------
.....................................................................................................................................................CAGGGGTCTGTGTGTGGA...................................................................................181.000.00------------------1.00-------------------
..............................................................................................................................................................................................................................TGCTTTCCTGGCTCTGCTTCC.......211.000.00-----------------------1.00--------------
.............................................................................................................................................AGGAAATGCAGGGGTCTG...........................................................................................1811.001.00--------------------------1.00-----------
....................................................................................................................................................GCAGGGGTCTGTGTGTTCT...................................................................................191.000.00-----------------1.00--------------------
.............................................................................................TGGAGAGAAAGTCAGATC...........................................................................................................................................181.000.001.00-------------------------------------
.............................................................................................TGGAGAGAAAGTCAGGT............................................................................................................................................1711.001.001.00-------------------------------------
.....................................................................................................................................................................................CCCCTTCTTCTCCTTGCAGCCT...............................................2211.001.00-----------1.00--------------------------
.............................................................................................TGGAGAGAAAGTCAGTTTC..........................................................................................................................................191.000.00-----1.00--------------------------------
...........................................................................................................................................AGAGGAAATGCAGGGGTCATCG.........................................................................................221.000.00------------1.00-------------------------
.............................................................................................TGGAGAGAAAGTCAGTTGC..........................................................................................................................................191.000.001.00-------------------------------------
.............................................................................................TGGAGAGAAAGTCAGTTCA..........................................................................................................................................191.000.00-------------------------1.00------------
.............................................................................................TGGAGAGAAAGTCAGTTCT..........................................................................................................................................191.000.001.00-------------------------------------
.............................................................................................TGGAGAGAAAGTCAGGTCCGG........................................................................................................................................2111.001.00---------1.00----------------------------
......................................................................................................................................................................................CCCTTCTTCTCCTTGCAGCCT...............................................2111.001.00-------------------1.00------------------
.............................................................................................................TTTCACAGGATGCTTAAGAAACTGC....................................................................................................................2511.001.00---------------1.00----------------------
...................................................................................................................AGGATGCTTAAGAAACTG.....................................................................................................................1820.500.50-------------------------------------0.50

Antisense strand
AGCTCTCTGAGAAGTGCAAGTCTTGGCTTGCATCCACTGTGTGGGAGCCCCAGGCGAGCTGCGACCTTCTCCTCCTGTCTGCTGACTTGCCACTGGAGAGAAAGTCAGGTTTCACAGGATGCTTAAGAAACTGCAGTGAAGAGGAAATGCAGGGGTCTGTGTGTTTCTAACCCAGTGCCTGCCCCTTCTTCTCCTTGCAGCCTGCTTCGTTGTTGTGCTCTGTGCTTTCCTGGCTCTGCCGCTGTCCATG
..........................................................................................((((((..(((((.((...((((((....(((..........)))))))))..)).((((((....)))))).)))))...)))))).........................................................................
........................................................................................89......................................................................................177.......................................................................
SizePerfect hitTotal NormPerfect NormSRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR040015(GSM532900)
G623T. (cervix)		SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR189787SRR189782SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		GSM532878(GSM532878)
G691T. (cervix)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444055(SRX128903)
Sample 27_2cDNABarcode: AF-PP-343: ACG CTC TT. (skin)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR040014(GSM532899)
G623N. (cervix)		SRR038859(GSM458542)
MM386. (cell line)		SRR553576(SRX182782)
source: Testis. (testes)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR040043(GSM532928)
G428T. (cervix)		TAX577738(Rovira)
total RNA. (breast)		GSM532885(GSM532885)
G850N. (cervix)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR040027(GSM532912)
G220T. (cervix)		SRR038852(GSM458535)
QF1160MB. (cell line)		SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
......................................................AGGAGAAGGTCGCAGCTCG................................................................................................................................................................................. 1911.001.00------------------------------1.00-------
............................................................ACAGGAGGAGAAGGTCGC............................................................................................................................................................................ 1811.001.00-----------------------------------1.00--
..........................................................................................................................................................................................................................TCTGTGCTTTCCTGGCCAG............. 191.000.00-------1.00------------------------------
...........................................................................................................................................................................................................................CTGTGCTTTCCTGGCTCGG............ 191.000.00-------1.00------------------------------