ID: uc010syp.1_intron_8_0_chr12_113550084_r.3p
GENE: (12)
chr12:113550034-113550283-


(5)
B-CELL
(2)
BRAIN
(5)
BREAST
(2)
CELL-LINE
(2)
CERVIX
(2)
HEART
(1)
LIVER
(6)
OTHER
(14)
SKIN
(2)
UTERUS

Sense strand
TAAGCCAGTGCAAAGGCTGCAGGATGGGAATGAGCTCATCGTGTTTAAGCAACAGCAAGAAACCCGGTGGGAAGGGGCAGGAAGGAGGCTGCGGACGTGGAGGGAAGATGAGTCCTCTCGGAGCTCAGCGGGGCCGGTGGAGGGTTTGGAGCAGGCAGATGTTGTGCCCCGAGGCTGAGCTGCTCCGCCGGCCCCTCCAGGAGGATCTCCTTCAAAGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCA
..............................................................(((........))).......((((((((.((.((.((((((........))))))))...)))))).(((((((((((((((((((....((((.......))))......))))))).))))))))))))))))....................................................
...........................................................60..........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336SRR343337SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335TAX577744(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577589(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
...............................................................................................................................................................................TGAGCTGCTCCGCCGATC.........................................................1818.000.0018.00----------------------------------------
...................................................................................................................................................................................................................TCAAAGGCGCACTCTGCG.....................1816.000.00-10.004.00-------1.00---------------1.00--------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGTATC........................................................199.000.009.00----------------------------------------
...............................................................CCGGTGGGAAGGGGCAGGAAGGAGGC.................................................................................................................................................................2614.004.00-----2.00------1.00---1.00------------------------
...................................................................................................................................................................................................................TCAAAGGCGCACTCTG.......................162.000.00--1.00------1.00-------------------------------
................................................................CGGTGGGAAGGGGCAGGAAGGA....................................................................................................................................................................2212.002.00------2.00----------------------------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGGCCC........................................................1911.001.00------------------1.00----------------------
................................................................................................................................CGGGGCCGGTGGAGGGTTTTGA....................................................................................................221.000.00-----------1.00-----------------------------
............................................................................................................................................................................................CGGCCCCTCCAGGAGCTCT...........................................191.000.00----------------------1.00------------------
................................................................CGGTGGGAAGGGGCAGGAAGGAGGG.................................................................................................................................................................251.000.00-------1.00---------------------------------
.................................................................................................................................................TTGGAGCAGGCAGATCTAG......................................................................................191.000.00----1.00------------------------------------
.............................................................ACCCGGTGGGAAGGGGCAGGAAGGAGGC.................................................................................................................................................................2811.001.00------------------------1.00----------------
.............................................................................CAGGAAGGAGGCTGCGGA...........................................................................................................................................................1821.001.00--------0.50------------------------0.50-------
...................................................................................................................................................................................................................TCAAAGGCGCACTCTGCGA....................191.000.00-1.00---------------------------------------
..............................................................................AGGAAGGAGGCTGCGGACCAC.......................................................................................................................................................211.000.00-------------------1.00---------------------
..................................................................................AGGAGGCTGCGGACGGAG......................................................................................................................................................181.000.00-----------------------------1.00-----------
..........................................................................................GCGGACGTGGAGGGAAGAC.............................................................................................................................................191.000.00--------------------1.00--------------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGGCCCC.......................................................2011.001.00--------------------------------1.00--------
...............................................................................................................................................................................TGAGCTGCTCCGCCGTTC.........................................................181.000.00---------------1.00-------------------------
................................................................................................................................................TTTGGAGCAGGCAGATGGAAT.....................................................................................211.000.00--------1.00--------------------------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGGCCCCT......................................................2111.001.00-----------------------1.00-----------------
..................................................................GTGGGAAGGGGCAGGAAGGAGGC.................................................................................................................................................................2311.001.00-------1.00---------------------------------
...............................................................................................................................................GTTTGGAGCAGGCAGATGGAAT.....................................................................................221.000.00------------------------------1.00----------
..................................................................................................................................................TGGAGCAGGCAGATGGAAT.....................................................................................191.000.00-----------------1.00-----------------------
.....................................................................................AGGCTGCGGACGTGGTT....................................................................................................................................................171.000.00-------------------------------1.00---------
......................................................................GAAGGGGCAGGAAGGACTTT................................................................................................................................................................201.000.00---------------------1.00-------------------
.........................................................................................................................................................................................................................GCGCACTCTCGGAGGAGCAGGTTC.........241.000.00-------------------------1.00---------------
..............................................................CCCGGTGGGAAGGGGCAGGAAGGAGGC.................................................................................................................................................................2711.001.00-------------1.00---------------------------
...............................................AGCAACAGCAAGAAATTG.........................................................................................................................................................................................181.000.00----1.00------------------------------------
.................................................................................................................................................TTGGAGCAGGCAGATGGAA......................................................................................1930.670.33-------------------------------------0.330.33--
......................................................................GAAGGGGCAGGAAGGAGGC.................................................................................................................................................................1920.500.50---------0.50-------------------------------
.................................................................................................................................................TTGGAGCAGGCAGATGGA.......................................................................................1830.330.33----------------------------------0.33------
.................................................................................................................................................TTGGAGCAGGCAGATG.........................................................................................1630.330.33------------------------------------0.33----
.................................................................................................................................................TTGGAGCAGGCAGATGGAAT.....................................................................................2030.330.33-----------------------------------0.33-----
................................................................................................................................................TTTGGAGCAGGCAGAT..........................................................................................1670.140.14---------------------------------------0.14-
................................................................................GAAGGAGGCTGCGGA...........................................................................................................................................................1580.120.12----------------------------------------0.12

Antisense strand
TAAGCCAGTGCAAAGGCTGCAGGATGGGAATGAGCTCATCGTGTTTAAGCAACAGCAAGAAACCCGGTGGGAAGGGGCAGGAAGGAGGCTGCGGACGTGGAGGGAAGATGAGTCCTCTCGGAGCTCAGCGGGGCCGGTGGAGGGTTTGGAGCAGGCAGATGTTGTGCCCCGAGGCTGAGCTGCTCCGCCGGCCCCTCCAGGAGGATCTCCTTCAAAGGCGCACTCTCGGAGGAGCAGATGCGGGAGACCA
..............................................................(((........))).......((((((((.((.((.((((((........))))))))...)))))).(((((((((((((((((((....((((.......))))......))))))).))))))))))))))))....................................................
...........................................................60..........................................................................................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR343336SRR343337SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)
SRR189784SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR343334SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
TAX577746(Rovira)
total RNA. (breast)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM532874(GSM532874)
G699T. (cervix)
SRR189782SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR343335TAX577744(Rovira)
total RNA. (breast)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR040035(GSM532920)
G001T. (cervix)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
TAX577589(Rovira)
total RNA. (breast)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
...............................................................................................................................................................................TGAGCTGCTCCGCCGATC......................................................... 183.000.003.00----------------------------------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGAA.......................................................... 172.000.00---2.00-------------------------------------
.............................................................................................................................CAGCGGGGCCGGTGGTC............................................................................................................ 171.000.00---------------------------1.00-------------
..............................................................................................................................................................................CTGAGCTGCTCCGCCTTGG......................................................... 191.000.00--------------1.00--------------------------
...............................................................................................................................................................................TGAGCTGCTCCGCCGAAC......................................................... 181.000.00---1.00-------------------------------------
..............................................................................................................................................................................CTGAGCTGCTCCGCCATGG......................................................... 191.000.00----------------------------1.00------------