ID: uc010syp.1_intron_10_0_chr12_113553070_r
GENE: (10)
chr12:113553020-113553489-


(1)
AGO1.ip 		(3)
B-CELL 		(2)
BRAIN 		(1)
BREAST 		(7)
CELL-LINE 		(13)
CERVIX 		(1)
HEART 		(1)
HELA 		(2)
OTHER 		(8)
SKIN

Sense strand
GGCTGGGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGGCTCGGACCAGTGAGTTGCCCGCACAACCCCCGACATCACCGCCCTCAATGGTGGGCTTGCAGGAGGGTCCTGGGGGAGGAATGGGGAGGCCTCAGGCAGAGGGAAAAAGGGCTCCTTTTTCTGTGGGTCCCTGTGCTGTGCACCTCCAGACAGTTGGGAGCCCAATTGCAGGTTCAGGCCCTGGCTTTGCTACTTGTGGGCTGTGTGACCTCAGGCAATTCACTTAACCACTCCGGGCCTCTGTACTGTGAATGGGGTTGATGTTTTGGGTCTTCCTGATTCTTGGGGCTGGAAGAATCATGACTCCCACCTTGGGTGAGTGGGGTGAGCTGGGTTCAGCTCCCTAAATCCCAGCAAACACTTCCTCCTGTCCTCCCAGTGGACCCCAACACCCTCTTCCGTTCTAACTCCCTGGCATCCAAGTCGATG
....................................................................................................................................................................................................................................................................................((((((........((((.(((..(((.......)))..))).))))..))))))............((((((......)).)))).(((.((((((....)))))))))....................................................................................
...................................................................................................................................................................................................................................................................................276............................................................................................................387.................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189785SRR343337SRR189787SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR189786GSM532879(GSM532879)
G659N. (cervix)		SRR040034(GSM532919)
G001N. (cervix)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR040019(GSM532904)
G701T. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR343336SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR040023(GSM532908)
G575T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAAC.......................................................................................187668.000.007658.001.002.00----2.00----------1.00---1.00-1.00---------1.00-----1.00-----
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAACG......................................................................................19953.000.00931.0011.001.001.00--2.00-1.00----1.00-----1.00-1.00---1.00-------1.00----1.00-------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAGC.......................................................................................1826.000.0026.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGGAC.......................................................................................1822.000.0022.00---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GGTGAGCTGGGTTCAGAAC.......................................................................................1916.000.0016.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAAT.......................................................................................187.000.007.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAGCG......................................................................................194.000.004.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGCAC.......................................................................................184.000.004.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTCCC.....................184.000.00----2.00-------1.00----------------------------1.00----
........................................................................................................................................................................................................................................................................................TCTGTACTGTGAATGGGGGAAC........................................................................................................................................................................223.000.00---1.00------2.00-----------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGGACG......................................................................................192.000.002.00---------------------------------------------
............................................................................................................................................................................................................................................................................................................................................................................GGTGAGCTGGGTTCAGAACG......................................................................................202.000.002.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGTAC.......................................................................................182.000.002.00---------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAATG......................................................................................192.000.001.00-------------------1.00-------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTGTC.....................181.000.00-----------------1.00----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTTTT.....................181.000.00-----------------------------1.00----------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTTAA.....................181.000.00-----------1.00----------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGACCG......................................................................................191.000.001.00---------------------------------------------
.....................................................................................................................................................................................................................................................................................................TGGGGTTGATGTTTTTGGG..............................................................................................................................................................191.000.00---1.00------------------------------------------
................................GTGAGGTGGCTCGGACCA....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00---------------1.00------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCTCTTCCGTTCTCCC.....................191.000.00-----------------------1.00----------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTAAA.....................181.000.00-----------1.00----------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAACTCCCTGGCATCCAAG......2111.001.00--------1.00-------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTGCC.....................181.000.00----------------1.00-----------------------------
.........................ACCCGGCGTGAGGTGGCTCGGACC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-------------------------------1.00--------------
........................................................................................................................................................................................................................................................................................TCTGTACTGTGAATGGGGGATT........................................................................................................................................................................221.000.00--1.00-------------------------------------------
...........................................CGGACCAGTGAGTTGGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------1.00-------------
............................................................................................TGGGCTTGCAGGAGGGAT........................................................................................................................................................................................................................................................................................................................................................................181.000.00------------------------------------1.00---------
.........................................................................................................................................................................................................................................................................................................................................................................................CAGCTCCCTAAATCCCAGG..........................................................................191.000.00-----------------------------------1.00----------
....................................................................................................................GAGGAATGGGGAGGCCGGGC..............................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------1.00---
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTGGG.....................181.000.00------------------------------1.00---------------
...................................................................................................................................CTCAGGCAGAGGGAATCAG................................................................................................................................................................................................................................................................................................................................191.000.00---------------------------------------1.00------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAAGG......................................................................................191.000.00-1.00--------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCTCTTCCGTTCTTAG.....................181.000.00--------------1.00-------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................GTGAGCTGGGTTCAGAAG.......................................................................................181.000.001.00---------------------------------------------

Antisense strand
GGCTGGGCGCTTTCTGGACTATCTCACCCGGCGTGAGGTGGCTCGGACCAGTGAGTTGCCCGCACAACCCCCGACATCACCGCCCTCAATGGTGGGCTTGCAGGAGGGTCCTGGGGGAGGAATGGGGAGGCCTCAGGCAGAGGGAAAAAGGGCTCCTTTTTCTGTGGGTCCCTGTGCTGTGCACCTCCAGACAGTTGGGAGCCCAATTGCAGGTTCAGGCCCTGGCTTTGCTACTTGTGGGCTGTGTGACCTCAGGCAATTCACTTAACCACTCCGGGCCTCTGTACTGTGAATGGGGTTGATGTTTTGGGTCTTCCTGATTCTTGGGGCTGGAAGAATCATGACTCCCACCTTGGGTGAGTGGGGTGAGCTGGGTTCAGCTCCCTAAATCCCAGCAAACACTTCCTCCTGTCCTCCCAGTGGACCCCAACACCCTCTTCCGTTCTAACTCCCTGGCATCCAAGTCGATG
....................................................................................................................................................................................................................................................................................((((((........((((.(((..(((.......)))..))).))))..))))))............((((((......)).)))).(((.((((((....)))))))))....................................................................................
...................................................................................................................................................................................................................................................................................276............................................................................................................387.................................................................................
SizePerfect hitTotal NormPerfect NormSRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR189785SRR343337SRR189787SRR040040(GSM532925)
G612N. (cervix)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR189786GSM532879(GSM532879)
G659N. (cervix)		SRR040034(GSM532919)
G001N. (cervix)		SRR189784SRR040018(GSM532903)
G701N. (cervix)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR040019(GSM532904)
G701T. (cervix)		SRR040029(GSM532914)
G026T. (cervix)		SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		SRR189783SRR343336SRR040016(GSM532901)
G645N. (cervix)		SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040036(GSM532921)
G243N. (cervix)		SRR040023(GSM532908)
G575T. (cervix)		SRR040007(GSM532892)
G601T. (cervix)		SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)		SRR040039(GSM532924)
G531T. (cervix)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)		GSM450599(GSM450599)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR040020(GSM532905)
G699N_2. (cervix)		SRR040035(GSM532920)
G001T. (cervix)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACCCCAACACCCTAA................................ 181.000.00---------1.00------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCCGTTCTAACAAC.................. 181.000.00---------------------------1.00------------------
......................................................................CCGACATCACCGCCCTCTTT............................................................................................................................................................................................................................................................................................................................................................................................ 201.000.00-----1.00----------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................CCACCTTGGGTGAGTGAGC........................................................................................................ 191.000.00-------------------------------------------1.00--
................................GTGAGGTGGCTCGGACATT................................................................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00---------1.00------------------------------------
................................................................................................................GGGGGAGGAATGGGGCCCA................................................................................................................................................................................................................................................................................................................................................... 191.000.00-------------------------------------1.00--------
.......................................................................................................................................................................................................................................................................................................................................................................................................CCAGCAAACACTTCCCATC............................................................ 191.000.00----------------------------1.00-----------------
..............................................................CACAACCCCCGACATCAGCT.................................................................................................................................................................................................................................................................................................................................................................................................... 201.000.00-----1.00----------------------------------------
....................................................................CCCCGACATCACCGCCCG................................................................................................................................................................................................................................................................................................................................................................................................ 181.000.00--------------------------1.00-------------------
...................................................................................................CCCCAGGACCCTCCTGC.................................................................................................................................................................................................................................................................................................................................................................. 1770.140.14--------------------------------------------0.14-
..........................................................................................................................................................................................................................................................................................................................................................................................TGGGATTTAGGGAGCT............................................................................ 1690.110.11---------------------------------------------0.11