ID: uc010snk.1_intron_15_0_chr12_51868991_f.3p
GENE: (16)
chr12:51873576-51873825+


(2)
BRAIN 		(1)
BREAST 		(9)
CELL-LINE 		(2)
CERVIX 		(1)
HEART 		(2)
LIVER 		(4)
OTHER 		(4)
SKIN

Sense strand
TATAAAATCAATATTTAAGATTATAGGCTATATGTTACTTAATTTCATTAAATAGAAAAAGAAATTCAGCCCTTCTGATGCCTAAACATATTGTAAGAAAGTGTACTATGGCTGCCCTTTTTTCTGTCTCACGAAACAGAGGGCTGTTTCTACAAGGCCAAGTTTTGTATAAATGGAATTTTTTTTTTTTTTTTTTTCAGATGGAGTCTTGCTCTGTCGCCTGGCTGGAGTGCGGTGGTGTGATCTTGGC
.....................................................((((((((((((((.((((.((((..(((.....(((((.......))))).....)))........((((........)))))))))))).((((.((((((((...)))))))).)))).)))))))))))))).............................................................
..................................................51.........................................................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782TAX577588(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCACTTG...............................................2710.000.001.002.004.002.001.00--------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGCC................................................258.000.006.002.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCATATT...............................................268.000.00---1.003.00-4.00------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTTTG................................................266.000.00--1.001.002.00-1.00---1.00--------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGTC................................................255.000.003.002.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGC.................................................244.000.003.001.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGC..................................................234.000.003.001.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTACC................................................263.000.002.001.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGGCC................................................263.000.003.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGG.................................................243.000.002.001.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGGG................................................253.000.003.00------------------------
.......................................................................................................................................................................................................GATGGAGTCTTGCTCTGTCGAAA............................233.000.00-------3.00-----------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGTAG..............................................272.000.001.00-1.00----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGCC.................................................242.000.002.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGC.................................................252.000.002.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCACTT................................................262.000.00-1.00----1.00------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTAGG.....................................................242.000.002.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACAGC...............................................262.000.002.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGAAG...............................................262.000.001.001.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTTGC................................................262.000.002.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTGGG................................................262.000.002.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTGCC................................................262.000.001.001.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTCG.................................................252.000.00--1.00-------1.00--------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACC.................................................242.000.001.001.00-----------------------
.....................................................................................................................................AAACAGAGGGCTGTTTCTACAAGGCCAAGTC......................................................................................312.000.00--2.00----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGC................................................252.000.002.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGTA................................................252.000.001.001.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGGC................................................252.000.001.001.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCATCTT...............................................261.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACGG................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGTC................................................251.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCACC.................................................251.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGACAGT.............................................291.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGCAT................................................251.000.00-1.00-----------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTGTCT..........................................................191.000.00----------------1.00--------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGAGGG..............................................281.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGCC................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGT................................................251.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTTCC................................................261.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCATTG................................................261.000.00----------1.00--------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGCT................................................251.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCATCAT...............................................261.000.00---1.00---------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGCCA................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACCA................................................251.000.00-----1.00-------------------
............................................................................................................................................................................ATGGAATTTTTTTTTTTTTTTGCTG.....................................................251.000.00-1.00-----------------------
...........................................................................................................................................................................AATGGAATTTTTTTTTTTTTTTTTTGACC..................................................291.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACCTG...............................................261.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGAATT..............................................271.000.001.00------------------------
........................................................................................................................................................................................................ATGGAGTCTTGCTCTGTCGAAGA...........................231.000.00-------------------1.00-----
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGTG................................................251.000.00-1.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGGG.................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGAA................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGTTC................................................251.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGGAC................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGCAG...............................................261.000.001.00------------------------
..............................................................................................................................................................................................TTTTTTTCAGATGGAGTGCC........................................201.000.00-------------1.00-----------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGTT...............................................261.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTAAT................................................261.000.00---1.00---------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGAGG..............................................271.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGAGACA.............................................281.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGCC................................................261.000.001.00------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCAGG.................................................281.000.00-1.00-----------------------
........................................................................................................................................................................................................................TCGCCTGGCTGGAGTGCGGTGGCGCG........261.000.001.00------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTATCT......................................................231.000.001.00------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTC....................................................2521.001.000.500.50-----------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCAAGT................................................291.000.001.00------------------------
......................................................................................................................................................................................................AGATGGAGTCTTGCTCTGTCGCCGGGG.........................271.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGGAC..............................................271.000.001.00------------------------
...........................................................................................................................................................................................................................CCTGGCTGGAGTGCGGCACC...........201.000.001.00------------------------
..................................................................................................................................................................................................................GCTCTGTCGCCTGGCTGGAGTGCGGTGGCG..........301.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACTC................................................251.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAAAT................................................261.000.00---1.00---------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTAAT..................................................271.000.00----1.00--------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTAGG................................................261.000.001.00------------------------
...........................................................................................................................................................................................................................CCTGGCTGGAGTGCGGTGTC...........201.000.00-----------------1.00-------
........................................................................................................................................................................................................................TCGCCTGGCTGGAGTGCGGCAC............221.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAAGC................................................261.000.00--1.00----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGACGG..............................................281.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGATCCCC............................................291.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTGGC................................................261.000.00-1.00-----------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTCGTG....................................................251.000.00-1.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTCAT................................................261.000.00--1.00----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGGCT................................................261.000.001.00------------------------
....................................................TAGAAAAAGAAATTCATTTG..................................................................................................................................................................................201.000.00-----------1.00-------------
...............................................................................................................................................................................................TTTTTTCAGATGGAGTCGCTG......................................211.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACCC................................................251.000.001.00------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTAAGC..................................................271.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGATTCCC............................................291.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGGGG...............................................261.000.001.00------------------------
.................................................................................................................GCCCTTTTTTCTGTCTGT.......................................................................................................................181.000.00------------1.00------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGAC.................................................241.000.00-1.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGCGGG..............................................281.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGGTT................................................261.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTACG................................................261.000.00---1.00---------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGATGGGGGC..........................................251.000.001.00------------------------
...........................................................................................................ATGGCTGCCCTTTTTTCATCC..........................................................................................................................211.000.00--1.00----------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTCTCC....................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACCGC...............................................261.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCATTG................................................251.000.00--1.00----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGAAATG.............................................281.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACTG................................................251.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTTCT................................................261.000.001.00------------------------
.....................................................................................................................................................................................................................................GTGCGGTGGTGTGATGACT..191.000.00----------------------1.00--
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGGC.................................................251.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCACTTG...............................................261.000.00-1.00-----------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCGACC................................................251.000.00-1.00-----------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCTGTC................................................261.000.001.00------------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCATGG................................................251.000.00---1.00---------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCTGGG................................................2920.501.00-0.50-----------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCGAG.................................................2820.501.000.50------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCT...................................................2620.501.000.50------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCTT..................................................2720.501.000.50------------------------
.............................................................................................................................................................................TGGAATTTTTTTTTTTTTTTTTTTCTCTT................................................2920.501.000.50------------------------
........................................................................................................................................................................................................ATGGAGTCTTGCTCTGTCGCCTGGC.........................2520.500.50-0.50-----------------------
.........................................................................................................................................................................................................TGGAGTCTTGCTCTGTCGCCTGGCTGGAG....................2920.500.500.50------------------------
........................................................................................................................................................................................................ATGGAGTCTTGCTCTGTCGCCTGGCTGG......................2820.500.500.50------------------------
.................................................................................................................................................................................................................TGCTCTGTCGCCTGGCTGGAGTGCGGTGG............2920.500.50-0.50-----------------------
............................................................................................................................................................................................................................CTGGCTGGAGTGCGGTGGTGTGA.......2330.330.33-----------------------0.33-
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGATG...............................................2680.120.120.12------------------------

Antisense strand
TATAAAATCAATATTTAAGATTATAGGCTATATGTTACTTAATTTCATTAAATAGAAAAAGAAATTCAGCCCTTCTGATGCCTAAACATATTGTAAGAAAGTGTACTATGGCTGCCCTTTTTTCTGTCTCACGAAACAGAGGGCTGTTTCTACAAGGCCAAGTTTTGTATAAATGGAATTTTTTTTTTTTTTTTTTTCAGATGGAGTCTTGCTCTGTCGCCTGGCTGGAGTGCGGTGGTGTGATCTTGGC
.....................................................((((((((((((((.((((.((((..(((.....(((((.......))))).....)))........((((........)))))))))))).((((.((((((((...)))))))).)))).)))))))))))))).............................................................
..................................................51.........................................................................................................................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189784SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189782TAX577588(Rovira)
total RNA. (breast)		SRR040029(GSM532914)
G026T. (cervix)		SRR189787GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		GSM450603(GSM450603)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		SRR189786SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................................................................................................................................................................................................................GGAGTGCGGTGGTGTGATTGGG.. 223.000.00-3.00-----------------------
..............................................................................................................................................................................................................................GGCTGGAGTGCGGTGGTGGGC....... 213.000.002.00-------------1.00----------
...............................................................................................................................................................................................................................GCTGGAGTGCGGTGGTACC........ 192.000.00--------2.00----------------
......................................................................................................................................................................................................ACTCCAGCCAGGCGACAGAGCAAGACTCCATCT................... 3312.002.00-2.00-----------------------
..............................................................................................................................................................................................................................GGCTGGAGTGCGGTGGTGTGAGC..... 232.000.00-2.00-----------------------
...................................................................................................................................................................................................................................GAGTGCGGTGGTGTGATCTTGGTG 242.000.00-----2.00-------------------
..............................................................................................................................................................................................................................GGCTGGAGTGCGGTGGTGTGGGC..... 232.000.001.00-------------------1.00----
..............................................................................................................................................................................................................................GGCTGGAGTGCGGTGGTGTGATGGGC.. 261.000.001.00------------------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCAGTTTT.............................................. 281.000.00------------------1.00------
..................................................................CAGCCCTTCTGATGCCTGCCG................................................................................................................................................................... 211.000.00-1.00-----------------------
....................................................................................................................................................................................................................................AGTGCGGTGGTGTGATTCAT.. 201.000.00-----1.00-------------------
.................................................................................................................................................................................ATTTTTTTTTTTTTTTTTTTCAGCACG.............................................. 271.000.00---------1.00---------------
........................................................................................................................................................................................TTTTTTTTTTTTTCAGATGCAGT........................................... 231.000.00---------1.00---------------
.................................................................................................................................................................................................TTTTCAGATGGAGTCTTGCTCTCAT................................ 251.000.00---------------1.00---------
.....................................................................................................................................................................................................................................GTGCGGTGGTGTGATGTTA.. 191.000.00-----1.00-------------------
....................................................................TAGGCATCAGAAGGGC...................................................................................................................................................................... 1611.001.00--------1.00----------------
.......................................................................................................................................................................................................GATGGAGTCTTGCTCTGTCGCCTCCAT........................ 271.000.00-1.00-----------------------
..................................................................................................................................................................................................................................GGAGTGCGGTGGTGTGATGGT... 211.000.00-----------1.00-------------
..............................................................................................................................................................................................................TCTTGCTCTGTCGCCTGATT........................ 201.000.00---------------------1.00---
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGATGCGAG........................................... 271.000.00---------1.00---------------
................................................................................................................................................................................AATTTTTTTTTTTTTTTTTTTCGTTA................................................ 261.000.00-------1.00-----------------
....................................................................................................................................................................................................................................AGTGCGGTGGTGTGATTTG... 191.000.00-----1.00-------------------
..................................................................................................................................................................................................................................GGAGTGCGGTGGTGTGATCGAG.. 221.000.00-1.00-----------------------
............................................................................................................................................................................................................................CTGGCTGGAGTGCGGTGGTGTGATACG... 270.330.000.33------------------------
............................................................................................................................................................................................................................ATCACACCACCGCACTCCAGCCAG...... 2430.330.33-0.33-----------------------
................................................................................................................................................................................ATCTGAAAAAAAAAAAAAAAAAAATT................................................ 2640.250.25------------------------0.25