ID: uc010sit.1_intron_18_0_chr12_22665614_r.3p
GENE: (9)
chr12:22665564-22665813-


(2)
BRAIN 		(2)
BREAST 		(8)
CELL-LINE 		(1)
KIDNEY 		(2)
LIVER 		(1)
OTHER 		(3)
SKIN

Sense strand
TCTTAGGAATAAGAAATGTACAGATTCTATATTTCTAAAGATTAATATAAATAATGTGGTTATTCAGTATAATGCATCTATTTCAGTTATTGTAAGTTTGAGATTTAGCTATATTTGTTCATTGGGAAAATAAGCAGTTACAGTTTTTGGATGATTTCTCTCTCTCTCTTTTTTTTTTTTAAATAAACTTCATTGCTAAGGGAGGATCGCCTCATAGGTTCTGTAGAAGGCGGGTATGTTTCTGAAAAAT
.....................................................................................................................................................(((((...................................)))))........................................................
...................................................................................................................................132...........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAAACAG............................................................23219.000.00113.0073.0020.0012.00--1.00------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTTTTCAG...................................................................288.000.001.003.002.002.00---------------
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAACCAG............................................................235.000.001.002.001.001.00---------------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAATATTG..............................................................234.000.001.002.00-1.00---------------
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAACG..............................................................213.000.002.001.00-----------------
.............................................................................................................................................................CTCTCTCTCTCTTTTTTTTTTTTCCG...................................................................262.000.00-2.00-----------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTAAAG.....................................................................262.000.001.001.00-----------------
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAAACCG............................................................232.000.001.00--1.00---------------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAAAGG................................................................212.000.00-2.00-----------------
......................................................................................................................................................................................................................TAGGTTCTGTAGAAGGCG..................1812.002.00--------2.00----------
...................................................................................................................................................................CTCTCTTTTTTTTTTTTACCG..................................................................212.000.001.00--1.00---------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTTTAAAG..................................................................302.000.002.00------------------
................................................................................................................................AATAAGCAGTTACAGTTTTTGGACGA................................................................................................262.000.00----2.00--------------
....................................................................................................................................................................TCTCTTTTTTTTTTTTAAAATG................................................................222.000.00-1.00-1.00---------------
............................................................................................................................................................TCTCTCTCTCTCTTTTTTTTTTTTCTAC..................................................................282.000.00----2.00--------------
....................................................................................................................................................................TCTCTTTTTTTTTTTTAAATTG................................................................222.000.002.00------------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTGC.......................................................................242.000.00----2.00--------------
.........................................................................................................................................................................................................GAGGATCGCCTCATAGGTTCTGTAGAAGGC...................3011.001.00----------1.00--------
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAAGCAG............................................................231.000.00---1.00---------------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAATAAAAAG............................................................251.000.00-1.00-----------------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATTTGG..............................................................221.000.001.00------------------
..................................................................................................................................................................................................................CTCATAGGTTCTGTAGAAGGCGGGTAT.............2711.001.00---------1.00---------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATATATG.............................................................231.000.001.00------------------
...................................................................................................................................................................CTCTCTTTTTTTTTTTTAAAAAAG...............................................................241.000.00---1.00---------------
.....................................................................................................................TTCATTGGGAAAATAAGCAGTTACAGTTTCTGG....................................................................................................331.000.00------1.00------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTTTTCCG...................................................................281.000.00-1.00-----------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTTTCCC...................................................................291.000.00--1.00----------------
..................................................................................................................................................................TCTCTCTTTTTTTTTTTTAAATAAAAAAT...........................................................291.000.001.00------------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTTGGTG...................................................................291.000.00----1.00--------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTTTCCG...................................................................291.000.00--1.00----------------
....................................................................................................................................................................TCTCTTTTTTTTTTTTAAAGTAG...............................................................231.000.00------1.00------------
....................................................................................................................................................................................................................CATAGGTTCTGTAGAAGGCGGGTATG............2611.001.00---------1.00---------
....................................................................................................................................................................TCTCTTTTTTTTTTTTAAAACGG...............................................................231.000.001.00------------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTTTACC...................................................................291.000.00-----1.00-------------
...............................................................................................................................................................CTCTCTCTCTTTTTTTTTTTTATTGT.................................................................261.000.00---1.00---------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTTTTACCTT.................................................................301.000.00-----1.00-------------
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAAAACG............................................................231.000.001.00------------------
............................................................................................................................................................TCTCTCTCTCTCTTTTTTTTTTTTACTTA.................................................................291.000.00-1.00-----------------
........................................................................................................................................................................................................................GGTTCTGTAGAAGGCGGGAA..............201.000.00------------1.00------
.........................................................................................................................................................................................................................GTTCTGTAGAAGGCGGGTATGTT..........2311.001.00-------1.00-----------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATAAAATCT...........................................................251.000.001.00------------------
................................................................................................................................................................................................TTGCTAAGGGAGGATCGCCTCATAGGTTCC............................301.000.00-----1.00-------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTCTGC.......................................................................241.000.00----1.00--------------
.................................................................................................................................................................CTCTCTCTTTTTTTTTTTTAAATAAATG.............................................................281.000.001.00------------------
......................................................................................................................................................ATGATTTCTCTCTCTCTCCCTG..............................................................................221.000.00---1.00---------------
................................................................................................................................................................TCTCTCTCTTTTTTTTTTTTAAAATAG...............................................................271.000.001.00------------------
...........................................................................................................................................................TTCTCTCTCTCTCTTTTTTTTTTTTCCAG..................................................................291.000.00---1.00---------------
....................................................................................................................................................................TCTCTTTTTTTTTTTTAAATTC................................................................221.000.00-1.00-----------------
.........................................................................................................................................................ATTTCTCTCTCTCTCTTTTTTTTTTAAAG....................................................................291.000.00---1.00---------------
..........AAGAAATGTACAGATTTTG.............................................................................................................................................................................................................................191.000.00--------1.00----------
..............................................................................................................................................................TCTCTCTCTCTTTTTTTTTTGGTT....................................................................241.000.00-----1.00-------------
...................................................................................................................................................................CTCTCTTTTTTTTTTTTAAATAAAT..............................................................251.000.00-1.00-----------------
........................................................................................................................................GTTACAGTTTTTGGATGATTT.............................................................................................2111.001.00-------1.00-----------
.........................................................................................................................................................ATTTCTCTCTCTCTCTTTTTTTTTTTTAAAG..................................................................311.000.00--1.00----------------
..............................................................................................................................................................TCTCTCTCTCTTTTTTTTTTTTACCTT.................................................................271.000.00----1.00--------------
.............................................................................................................................................................................................................ATCGCCTCATAGGTTCTGTAGAAGG....................2511.001.00-------------1.00-----
................................................................................................TTTGAGATTTAGCTATATTTGTTCTGGG..............................................................................................................................281.000.00------1.00------------
............................................................................................................................................................TCTCTCTCTCTCTTTTTTTTTTTTCCG...................................................................271.000.00-1.00-----------------
.......................................................................................................................................................................................................................AGGTTCTGTAGAAGGGTAC................191.000.00-----------1.00-------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATAAAAG.............................................................231.000.001.00------------------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATAACG..............................................................221.000.001.00------------------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAATAT................................................................211.000.00--1.00----------------
............................................................................................................................................................................TTTTTTTTAAATAAACTTCCAAT.......................................................231.000.00------1.00------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTTTTACC.....................................................................271.000.00-----1.00-------------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAAAAG................................................................211.000.00--1.00----------------
.................................................................................................................................................................CTCTCTCTTTTTTTTTTTTAAATAACT..............................................................271.000.00-1.00-----------------
..........................................................................................................................................................TTTCTCTCTCTCTCTTTTTTTCTTG.......................................................................251.000.00--1.00----------------
......................................................................................................................................................................TCTTTTTTTTTTTTAAATAAAAAT............................................................241.000.00-1.00-----------------
..................................................................................................................................................................TCTCTCTTTTTTTTTTTTAAAGC.................................................................231.000.00----1.00--------------
................................................................................................................................................................................................................GCCTCATAGGTTCTGTAGAAGGC...................2311.001.00--------------1.00----
.............................................................................................................................................................................................................................TGTAGAAGGCGGGTATGTTTCTGA.....2411.001.00-------1.00-----------
.....................................................................................................................................................................CTCTTTTTTTTTTTTAAAACG................................................................211.000.001.00------------------
......................................................................................................................................................ATGATTTCTCTCTCTCTCTTTTTTTTC.........................................................................271.000.00-----1.00-------------
.........................................................................................................................................................ATTTCTCTCTCTCTCTTTTTTTTTCG.......................................................................261.000.00--1.00----------------
...................................................................................................................................................................CTCTCTTTTTTTTTTTTACGG..................................................................211.000.00--1.00----------------
.................................................................................................................................ATAAGCAGTTACAGTTT........................................................................................................1720.500.50----0.50--------------
.......................................................................................................................................................................................................................AGGTTCTGTAGAAGGC...................1620.500.50------------------0.50
.......................................................................................................................................................................CTTTTTTTTTTTTAAATAAACT.............................................................2250.200.20-0.20-----------------
.................................................................................................................................................................CTCTCTCTTTTTTTTTTTTAAATTAG...............................................................2660.170.17-0.17-----------------
.................................................................................................................................................................CTCTCTCTTTTTTTTTTTTAAAT..................................................................2360.170.170.17------------------

Antisense strand
TCTTAGGAATAAGAAATGTACAGATTCTATATTTCTAAAGATTAATATAAATAATGTGGTTATTCAGTATAATGCATCTATTTCAGTTATTGTAAGTTTGAGATTTAGCTATATTTGTTCATTGGGAAAATAAGCAGTTACAGTTTTTGGATGATTTCTCTCTCTCTCTTTTTTTTTTTTAAATAAACTTCATTGCTAAGGGAGGATCGCCTCATAGGTTCTGTAGAAGGCGGGTATGTTTCTGAAAAAT
.....................................................................................................................................................(((((...................................)))))........................................................
...................................................................................................................................132...........................................................194......................................................
SizePerfect hitTotal NormPerfect NormSRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189782SRR191466(GSM715576)
114genomic small RNA (size selected RNA from . (breast)		TAX577743(Rovira)
total RNA. (breast)		SRR553575(SRX182781)
source: Kidney. (Kidney)
.................................................................................................................TTTGTTCATTGGGAACTT....................................................................................................................... 182.000.00----------------1.001.00-
.................................................................................................................................ATAAGCAGTTACAGTATAG...................................................................................................... 191.000.00---1.00---------------
...................................................................................................................................AAGCAGTTACAGTTTTTGTG................................................................................................... 201.000.00---------------1.00---