ID: uc010rov.1_intron_0_0_chr11_66024960_f.5p
GENE: KLC2(1)
chr11:66024910-66025159+


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(5)
AGO2.ip
(20)
B-CELL
(2)
BRAIN
(92)
BREAST
(46)
CELL-LINE
(35)
CERVIX
(9)
HEART
(6)
HELA
(1)
KIDNEY
(8)
LIVER
(2)
OTHER
(2)
RRP40.ip
(76)
SKIN
(1)
TESTES
(4)
UTERUS
(1)
XRN.ip

Sense strand
GCGCCTCAGTTTCTCCCGACGTCCTCGATGGCGCCATGGCGCCACACTAGGTACCTTCGGGTTCGACCTCCCGAGCAGCTCCACACGCTGAGGCCCCGCGGCATTTTGCGGCCGAGGGCACCCCTCGGGGCTGGCGGGCCCTGGGAACTGCGCCCCGGGCGGGTCCTCGCACCGCCCCCGCCTCGATGGCCCCGCCCCGTCCCCCTCCCGCTGGAGCCGGCCCGGCCCGCGCTCCTTTAAGGCAGCGAAC
.....................................................................................................................((((((((((((((..((((.((...))..)))))))))))).))))....))................................................................................
.....................................................................................................................118....................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577741(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040007(GSM532892)
G601T. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577745(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM532880(GSM532880)
G659T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM532877(GSM532877)
G691N. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040014(GSM532899)
G623N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
TAX577588(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM532889(GSM532889)
G576N. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
GSM532887(GSM532887)
G761N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR037937(GSM510475)
293cand2. (cell line)
GSM532890(GSM532890)
G576T. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191637(GSM715747)
99genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR191395(GSM715505)
25genomic small RNA (size selected RNA from t. (breast)
GSM532883(GSM532883)
G871N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
GSM532872(GSM532872)
G652T. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR343334SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532929(GSM532929)
G702N. (cervix)
GSM532875(GSM532875)
G547N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)
GSM532882(GSM532882)
G696T. (cervix)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
......................................................................................................................................................CGCCCCGGGCGGGTCGCGC.................................................................................19133231.00208.001731.001534.001527.001222.001224.001150.001057.00880.00826.00227.00112.00753.00721.00651.00685.00641.00658.00599.00641.00559.00555.00166.00592.00530.00537.00512.00486.00485.00475.00498.00481.00380.00453.00392.00419.00372.00348.00355.00390.00347.00361.00382.00344.00330.00264.00267.00256.00245.00256.00263.00234.00232.00207.00216.00235.00151.00155.0057.00145.00167.00150.00132.00133.00135.00135.00100.0089.0099.0081.0074.0088.0068.0051.0041.0059.0022.0035.0048.0052.0051.0036.0029.0031.0016.0036.005.0031.0029.0023.008.004.0018.0024.0021.0022.007.004.007.0013.00-9.0014.004.001.00-1.009.002.001.004.001.009.0011.00-11.0010.003.006.005.006.00-2.007.005.001.004.002.00-3.001.005.00-7.001.004.005.002.005.002.003.002.00-2.002.005.001.003.00-2.00-3.001.004.004.00-2.004.003.00-4.00-1.001.003.003.00-1.001.00---2.001.002.00-3.002.00-1.002.002.00-1.001.00--1.002.001.002.001.00---1.001.002.00-1.00--1.00--1.00-2.00----1.00-1.001.002.002.001.002.00---1.00-----1.00---1.00-1.00-1.001.001.00-1.001.00-----------1.00--1.00----1.00--1.001.001.00-1.00--1.00-------1.00-1.00------1.001.00---1.00-1.00-1.001.00-------
......................................................................................................................................................CGCCCCGGGCGGGTCGCG..................................................................................1813600.00208.0083.0090.0067.0081.0093.0065.0083.0057.0070.00363.00212.0036.0056.0064.0037.0039.0043.0053.0039.0055.0047.00251.0033.0041.0028.0046.0042.0031.0035.0021.0037.0059.0028.0036.0026.0026.0032.0045.0034.0036.0031.0013.0019.0018.0029.0014.0016.0015.0012.0011.0034.0018.0030.0014.0010.0020.0015.0083.0018.005.0014.0013.0015.0013.006.0012.0015.0012.0012.0014.006.0012.008.009.006.0017.0031.005.003.004.009.0011.0012.0018.004.003.004.006.002.007.0014.008.002.007.002.007.0014.009.005.001.002.00-5.009.0013.0012.002.0012.002.004.0012.004.002.00-1.001.002.003.001.001.006.00--2.002.00-5.00-5.004.00------3.00-4.00----3.00-5.001.00-2.002.001.003.001.00-3.00-----1.003.001.001.00-1.003.00-2.002.00--2.00-----2.001.00---1.00---------2.00---1.001.00-----1.001.00-1.00----2.001.00---1.00-------------1.00-------------1.001.00-1.00---------1.00----1.00-----1.00-------1.001.00---1.00---1.00-------------1.00-----
......................................................................................................................................................CGCCCCGGGCGGGTCG....................................................................................1611017.00208.007.0021.0012.0024.0026.009.0012.0019.0022.0046.00307.0015.0024.0021.0010.0015.007.0015.0010.0014.0018.0024.002.0013.001.005.004.0014.009.005.007.0018.005.0012.007.0018.0030.0010.005.006.0010.003.0010.008.003.003.004.005.005.00-3.002.002.004.002.007.001.00-1.002.003.001.005.003.001.004.002.001.00---6.006.005.00-18.00-----1.002.00--5.001.00-1.00-3.00-2.00--5.00--1.001.00-------------2.00-----------------1.00-1.00-------4.00-----2.00----------1.00-----------3.00--------------------2.00------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGC...................................................................................1711012.00208.0024.0031.0026.0045.0020.0019.0022.0028.0027.0058.003.0023.0016.0033.0024.0020.0019.0017.008.0014.009.0020.005.008.0015.0010.0011.0017.0020.0016.0015.0014.0018.0017.009.0021.0013.0018.007.0010.009.006.0010.0014.002.007.0012.009.0011.004.002.008.004.0011.009.0011.0011.009.006.008.00-4.003.005.00-6.00-1.002.002.003.00-3.002.003.003.00-5.003.001.001.002.001.005.002.001.002.001.002.001.001.00-3.00-2.001.00-1.00-1.00------2.00-1.00----2.00--4.00-2.001.00-2.001.00----------1.00---------------1.00--------------1.001.00------------------------1.00----1.00------------------------------------------------------1.00----1.00------1.00-----------1.00-1.00-----------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGCG..................................................................................191927.0064.008.0021.005.0022.005.007.0010.0019.0022.00190.0047.004.0010.0018.006.0021.005.0013.006.0012.007.00145.005.004.005.006.008.0013.008.004.001.0016.0012.008.0010.0011.0024.0011.004.008.00-6.002.004.003.002.001.006.001.003.001.00-7.0010.001.006.005.0022.003.001.002.006.003.00--4.005.002.00-1.00--5.005.00-2.001.001.00----1.00-1.00---3.0011.006.001.00---1.00-2.00----5.001.001.00---1.00-------------------------1.001.00-1.00----------1.00------1.00---------------------3.00------------------------------2.00-----------------------------------------------------------------------1.00-------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCG....................................................................................181210.0058.00-5.001.006.00-1.002.003.003.007.0081.001.00-5.001.001.00-2.00--1.001.00-2.00-1.005.001.002.001.00-5.00---6.003.007.001.003.002.005.001.002.00--------5.002.00-------1.00-1.00-1.00--1.00-1.00---2.001.00---------5.00--1.00---1.00--1.001.00----------------1.00-----------1.00-----1.00-1.00--------1.00------1.00-1.00------1.00---1.00--2.00----------------1.00-----1.00-------------1.00----------------------1.00-------1.00-----1.00--------------------------------1.00---------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTC.....................................................................................151208.00208.002.008.002.0019.001.00-4.007.008.006.004.005.002.0013.002.001.00-6.002.002.003.002.001.002.001.003.006.003.003.002.00-7.003.003.001.006.005.001.00-7.002.002.001.00-1.001.002.004.002.00-2.00--1.003.004.003.00-1.00-3.002.00-1.001.002.00------2.001.00-1.00----------2.00-1.00-2.00------1.00---------------1.00-----------------1.00---------------2.00----------1.00--------------------------------------------------------------1.00--------------------------------------------------------------------------1.00---------
.....................................................................................................................................................GCGCCCCGGGCGGGTCG....................................................................................171203.0064.001.006.002.006.002.001.001.006.005.0025.0021.001.006.002.003.002.003.001.00---13.00--2.00-2.001.003.002.00-4.00--1.001.003.001.001.001.002.00--2.00--1.00--1.001.001.00-1.00-1.001.003.001.00------2.00---------2.00-1.00-----3.00-21.00----2.00--------12.00--1.00----------1.00------4.00----------3.00-1.00----------------1.00-------1.00---------------------------------------------------------------------------------------------1.00-------1.00--------------1.00-----------------------1.00------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGCGC.................................................................................201162.0064.002.004.001.001.005.00-3.00-1.001.002.002.00--5.005.00-5.001.00-4.00--1.00--2.0010.003.001.001.007.001.005.001.002.00-5.001.00-1.001.001.001.002.00-2.003.00---3.006.00--2.002.00-2.00--4.002.003.001.001.00--3.001.00---7.00---------2.00-----5.00----------1.00--4.00----8.002.00--------1.00----------------1.00----4.00-1.00-------------------1.00----------------------------------1.00--------------------------------------------------------1.00---------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGCGC.................................................................................211133.0058.001.001.001.002.001.001.002.00--------4.001.002.003.004.001.00-3.00-3.001.001.003.001.001.00-4.00-7.002.00---1.002.00--6.00--1.00-2.00-1.00-3.00-3.001.004.002.00-1.00---1.001.00--3.00-2.005.00---2.003.00--3.002.002.00-------------1.00------2.001.00-------3.00-----1.00------1.00--2.00---2.002.00--------2.00--2.00-1.00-1.00--------------------1.00-----1.00-------2.00----1.00-----------------------1.00-------------------1.00-------------1.00--------------------------------------1.001.00------1.00--------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGCG..................................................................................20196.0058.00-1.00-2.00-1.001.00--3.0031.00-1.002.00-3.00-1.00---3.002.001.00--2.00-1.00--3.00-2.001.001.001.003.00-1.00--2.00----2.00-----1.001.00-1.006.001.00---1.00-1.00-3.00---1.00----------1.00-1.00---1.00---1.00-----------------------------------------1.00-----1.00--------------------------------------------------------------1.00----------------1.00------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTC.....................................................................................16164.0064.002.001.001.003.00--1.00-1.006.00--1.00--3.00-4.00-1.00-5.00-1.001.00--1.00-1.00-1.00-1.001.001.002.002.001.002.00-----2.001.00----1.00--1.001.00--1.00-1.002.001.00---------1.00--------------------------1.00-------------3.00-----------------1.00---------1.00--------------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGC...................................................................................19163.0058.00-2.00-1.00-1.001.00-1.001.00---1.00-1.00-1.002.00-1.00-----1.001.00---2.00-1.001.001.002.002.001.00--1.004.002.00-1.00-1.00---1.001.00--1.00--3.00-3.002.001.001.00---------1.00---1.00-------------2.00----1.00--------------------------1.00---------1.00-------1.00-----1.00-------------------------------------2.00--------1.00-----1.00--1.00-----------------------------------------------1.00----------------------------------------1.00-------------
....................................................................................................................................................TGCGCCCCGGGCGGGTC.....................................................................................17158.0058.00--1.004.001.002.00--1.002.008.00-1.002.00-3.00----2.00-----2.002.00-2.00-2.00-------3.001.001.001.00---1.002.00----2.00--1.00---------------1.00---------------------------1.00-------------2.00-----------1.00--------------------------------------------------1.00--------------------------------1.00----------1.00--1.00-----------1.00---------------------------------------------------1.00------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGC...................................................................................18155.0064.00---2.001.001.001.00-1.006.00-1.00---2.00-1.00--1.003.001.00---1.00---1.002.00-1.002.00-----2.00-1.00--2.00---1.00-1.001.00--1.00-----1.002.00---1.00----1.00-1.00---1.00--------1.00-------------------------------------------------------------------------2.00--------1.00--------------2.00---------------1.001.00-1.00---1.00---------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGTGC.................................................................................19141.00208.002.008.00--2.001.00--1.001.001.00-3.001.001.00--1.00--1.00-1.001.001.00-3.00-------------2.001.001.001.00---------------------1.00---1.00-1.001.00-------1.00------------------------------------1.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGG.......................................................................................15737.0037.000.140.14-0.710.570.140.140.14-14.007.710.570.140.290.290.29-0.57--0.293.00--0.290.14--0.14-0.140.57-0.43-0.570.430.29-0.14-------0.14--0.14-0.29--0.140.14--0.29--0.140.14-0.14-0.29--0.140.140.140.29-0.43-----0.14---0.14----0.14------0.14-0.14-------------0.14-----------------0.29-----------------------------------------------------------------------------------------0.140.14-------------------------------------------------------------------------------0.14--0.14
......................................................................................................................................................CGCCCCGGGCGGGTCGCGT.................................................................................19135.00208.002.001.00--1.00---1.00-1.001.004.00----1.00--1.00--1.00--5.00----1.00--------1.001.00-------1.00-------1.00--1.00-------1.00---------1.00-2.00----------2.00-1.00------1.00-----------------1.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGT......................................................................................16229.0029.00-0.50-0.50--0.500.500.50-12.00-0.500.50---0.50--0.50-----1.00-0.50--0.50-2.00-0.501.00--0.50-----0.50------0.500.50-0.50----0.501.00----------0.50----------------------------------------------------------------------------------------------------------------------------------------1.00----------0.50---------------------------------------------------------------------------------0.500.50--
......................................................................................................................................................CGCCCCGGGCGGGTCGCTC.................................................................................19128.00208.00---21.00-------1.00--------1.00-1.00-1.00--------------------------1.00------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCGA.................................................................................19119.00208.002.00-1.00------1.00-2.00--1.00--4.00---1.00------------1.00-------------1.00----------------1.00---2.00----------------------------------------------1.00-------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCAC.................................................................................19116.00208.002.00-1.001.00-1.00-1.001.00----------1.00---1.00--1.00--------------1.00--1.00---1.00-----------------1.00------1.00-------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCGG.................................................................................19114.00208.001.00-1.00------1.00-2.00----1.001.00---2.00-----------------------------------1.00----1.00------1.00--1.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGAGC.................................................................................19112.00208.001.00--------------------3.001.001.001.00------------------------------1.00-------------2.00--------1.00------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCTCGC.................................................................................19112.00208.00------------------1.00-----1.00-------1.001.00-----1.00-----------------1.001.00-------1.00-2.00-------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCACGC.................................................................................19110.00208.001.00-1.001.00---1.00------1.001.00----1.00-1.00-1.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGT......................................................................................1549.009.00---0.75----0.50-2.250.25-----0.50------0.25--0.25---0.500.75---0.250.25-0.25------0.25-----0.25----------0.250.25-------0.25----------------------0.25---0.25-------------0.25--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.25---
......................................................................................................................................................CGCCCCGGGCGGGTCCCGC.................................................................................198.000.00-------------------1.00--1.001.00------1.00---1.00----------------------1.00------------------------------------------------------------------------1.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCCC.................................................................................1918.00208.001.00----------------1.00------1.00--1.00-1.00--------------------------------------1.00-----------2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGTG..................................................................................1817.00208.00--------------1.00---------1.00-------------------------------------------1.001.00-------1.00------------------1.00-----------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCA....................................................................................1616.00208.00----------1.00--------------------------------------------------------------------------------------------------------------------5.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCT..................................................................................1815.00208.00---2.00-----------------------------1.00----------------------------------1.00--------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGT...................................................................................1813.0064.00---------------------------------------------------------------------1.00------------------------------------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCCCCGGGCGGGTCCCGC.................................................................................183.000.00--1.00---------------------------1.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCCCCGGGCGGGTCCCG..................................................................................173.000.00---------2.00----------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGATC.................................................................................1913.00208.00-------------------------------------------------------------------------------------------------------------------------------3.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGGG..................................................................................1813.00208.00---------2.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCA..................................................................................1813.00208.00---------1.001.00----------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCCTCGCT...............................................................................223.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3.00-----------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGCC..................................................................................1913.0064.00---------------------2.00----------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGAG..................................................................................1813.00208.00-------------------------------------------------------------------------------------------------1.00---------------------2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGGG..................................................................................1913.0064.00---------2.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGTG..................................................................................2013.0058.00-----------------------2.00--------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGCGCCCCGGGCGGGTC.....................................................................................1812.002.00-------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCC..................................................................................1812.00208.00---------1.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGCGCCCCGGGCGGGTCG....................................................................................1912.002.00-------------------------------------------------------------------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGCGCCCCGGGCGGGTCGCG..................................................................................2112.002.00-------------------------------------------------------------------------------------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGTG..................................................................................1912.0064.00-1.00----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................CCTCGGGGCTGGCGGGC...............................................................................................................1712.002.00-------------------------------------------------------------------------------------1.00-------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGGGC.................................................................................1912.00208.00-------------------------------------------------------------------1.00------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGTT..................................................................................1912.0064.00----------------------------------------------------------------------------------------------------------------------------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGCGA.................................................................................2111.0058.00-------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................ACACTAGGTACCTTCATC.............................................................................................................................................................................................181.000.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................ACTGCGCCCCGGGCGGGTCGCGC.................................................................................231.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................GCCCCGGGCGGGTCCGCC.................................................................................181.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGCGG.................................................................................2011.0064.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................AACTGCGCCCCGGGCGGGT......................................................................................1911.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGCA..................................................................................2011.0058.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGCCT.................................................................................1911.00208.00--------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................GCCCGGCCCGCGCTCCTGGGA..........211.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CCGCCCCGTCCCCCTGC..........................................171.000.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGT...................................................................................1711.00208.00-----------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCTC...................................................................................1711.00208.00----------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGAG..................................................................................1911.0064.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCCGCC.................................................................................191.000.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCCCCGGGCGGGTCCCGCC................................................................................191.000.00----------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................GCCATGGCGCCACACTGG........................................................................................................................................................................................................181.000.00---------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGGGC.................................................................................2011.0064.00--------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGA...................................................................................1811.0064.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CCCGCCCCGTCCCCCCCCC.........................................191.000.00----------------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGCA..................................................................................1911.0064.00---------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGAGC.................................................................................2011.0064.00-----------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCAC...................................................................................1711.00208.00--------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................GTCCCCCTCCCGCTGAAAA.................................191.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----
..................................................................................................................................................ACTGCGCCCCGGGCGGGT......................................................................................1811.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGTTT.................................................................................1911.00208.00----------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CCCCGCCCCGTCCCCCCC...........................................181.000.00----------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTCGTGC.................................................................................2011.0064.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CGCCCCGTCCCCCTCCGA........................................181.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCACG..................................................................................1811.00208.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGAGC.................................................................................2111.0058.00-----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGAA..................................................................................1811.00208.00--------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................CACCCCTCGGGGCTGGCGGGC...............................................................................................................2111.001.00------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGTGT.................................................................................1911.00208.00-------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCGAGT.................................................................................1911.00208.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------
.......................................................................................................................................................GCCCCGGGCGGGTCCCGCT................................................................................191.000.00---------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCAC...................................................................................1911.0058.00----------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCA....................................................................................1811.0058.00----------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CGCCCCGGGCGGGTCTCTC.................................................................................1911.00208.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTCGCGT.................................................................................2111.0058.00-------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................CAGCTCCACACGCTGGGCT............................................................................................................................................................191.000.00---------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................TCGACCTCCCGAGCAGC...........................................................................................................................................................................1720.500.50---------------------------------------------------------------------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGCGCCCCGGGCGGG.......................................................................................1640.500.50-----------------------------------------------------------------------------------------------------------------0.25-------0.25----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCCTCGATGGCCCCGCCC.....................................................1820.500.50------------------------------------------------------------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGTAGCG..................................................................................2020.5029.00---------------------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTTGCG..................................................................................1940.509.00---0.25------------------------------------------------------------------------------------------------------------------0.25-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CGCCCCGTCCCCCTCCCG........................................1830.330.33------------------------------------------------------------------------------------------------0.33-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCCGGGCGGGTGGCG..................................................................................1940.259.00---------0.25--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CCCGCTGGAGCCGGC.............................1550.200.20-----------------------------------------------------------------------------------------------0.20------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................TGCGCCCCGGGCGGGA......................................................................................1670.1437.00---------0.14--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................CTGCGCCCCGGGCGG........................................................................................1570.140.14---------0.14--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
GCGCCTCAGTTTCTCCCGACGTCCTCGATGGCGCCATGGCGCCACACTAGGTACCTTCGGGTTCGACCTCCCGAGCAGCTCCACACGCTGAGGCCCCGCGGCATTTTGCGGCCGAGGGCACCCCTCGGGGCTGGCGGGCCCTGGGAACTGCGCCCCGGGCGGGTCCTCGCACCGCCCCCGCCTCGATGGCCCCGCCCCGTCCCCCTCCCGCTGGAGCCGGCCCGGCCCGCGCTCCTTTAAGGCAGCGAAC
.....................................................................................................................((((((((((((((..((((.((...))..)))))))))))).))))....))................................................................................
.....................................................................................................................118....................................................173...........................................................................
SizePerfect hitTotal NormPerfect NormSRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553574(SRX182780)
source: Heart. (Heart)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577579(Rovira)
total RNA. (breast)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
TAX577741(Rovira)
total RNA. (breast)
TAX577590(Rovira)
total RNA. (breast)
TAX577746(Rovira)
total RNA. (breast)
TAX577589(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577740(Rovira)
total RNA. (breast)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
TAX577742(Rovira)
total RNA. (breast)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532871(GSM532871)
G652N. (cervix)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR040007(GSM532892)
G601T. (cervix)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
TAX577745(Rovira)
total RNA. (breast)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
GSM532880(GSM532880)
G659T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
GSM532877(GSM532877)
G691N. (cervix)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR033725(GSM497070)
Unmutated CLL (CLLU626). (B cell)
SRR040014(GSM532899)
G623N. (cervix)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR040010(GSM532895)
G529N. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
TAX577588(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
GSM532889(GSM532889)
G576N. (cervix)
SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
TAX577738(Rovira)
total RNA. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR207114(GSM721076)
"IP against AGO 1 & 2, RRP40 knockdown". (ago1/2 RRP40 cell line)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
DRR001486(DRX001040)
"Hela long cytoplasmic cell fraction, LNA(+)". (hela)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR040029(GSM532914)
G026T. (cervix)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191500(GSM715610)
7genomic small RNA (size selected RNA from to. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
SRR191417(GSM715527)
39genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR191591(GSM715701)
53genomic small RNA (size selected RNA from t. (breast)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR191594(GSM715704)
70genomic small RNA (size selected RNA from t. (breast)
SRR191456(GSM715566)
182genomic small RNA (size selected RNA from . (breast)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM532879(GSM532879)
G659N. (cervix)
GSM532887(GSM532887)
G761N. (cervix)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040030(GSM532915)
G013N. (cervix)
TAX577580(Rovira)
total RNA. (breast)
SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191636(GSM715746)
105genomic small RNA (size selected RNA from . (breast)
SRR037937(GSM510475)
293cand2. (cell line)
GSM532890(GSM532890)
G576T. (cervix)
SRR191624(GSM715734)
31genomic small RNA (size selected RNA from t. (breast)
SRR040012(GSM532897)
G648N. (cervix)
SRR191414(GSM715524)
31genomic small RNA (size selected RNA from t. (breast)
SRR191623(GSM715733)
18genomic small RNA (size selected RNA from t. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR037943(GSM510481)
293DcrTN. (cell line)
GSM532881(GSM532881)
G696N. (cervix)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR191498(GSM715608)
3genomic small RNA (size selected RNA from to. (breast)
SRR029130(GSM416759)
DLD2. (cell line)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR191398(GSM715508)
35genomic small RNA (size selected RNA from t. (breast)
SRR191488(GSM715598)
14genomic small RNA (size selected RNA from t. (breast)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR191637(GSM715747)
99genomic small RNA (size selected RNA from t. (breast)
SRR037935(GSM510473)
293cand3. (cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR191447(GSM715557)
142genomic small RNA (size selected RNA from . (breast)
SRR191633(GSM715743)
85genomic small RNA (size selected RNA from t. (breast)
SRR191395(GSM715505)
25genomic small RNA (size selected RNA from t. (breast)
GSM532883(GSM532883)
G871N. (cervix)
SRR444046(SRX128894)
Sample 7cDNABarcode: AF-PP-342: ACG CTC TTC C. (skin)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR191581(GSM715691)
104genomic small RNA (size selected RNA from . (breast)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR191405(GSM715515)
55genomic small RNA (size selected RNA from t. (breast)
SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040036(GSM532921)
G243N. (cervix)
GSM416733(GSM416733)
HEK293. (cell line)
SRR191593(GSM715703)
62genomic small RNA (size selected RNA from t. (breast)
SRR189785SRR037931(GSM510469)
293GFP. (cell line)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR040022(GSM532907)
G575N. (cervix)
SRR191416(GSM715526)
34genomic small RNA (size selected RNA from t. (breast)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR444060(SRX128908)
Sample 18cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)
SRR040024(GSM532909)
G613N. (cervix)
SRR040020(GSM532905)
G699N_2. (cervix)
SRR191579(GSM715689)
102genomic small RNA (size selected RNA from . (breast)
SRR191473(GSM715583)
121genomic small RNA (size selected RNA from . (breast)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
GSM532872(GSM532872)
G652T. (cervix)
SRR444042(SRX128890)
Sample 3cDNABarcode: AF-PP-335: ACG CTC TTC C. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR343334SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)
SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)
SRR189784SRR040018(GSM532903)
G701N. (cervix)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191420(GSM715530)
122genomic small RNA (size selected RNA from . (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191598(GSM715708)
79genomic small RNA (size selected RNA from t. (breast)
SRR191485(GSM715595)
123genomic small RNA (size selected RNA from . (breast)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR191567(GSM715677)
46genomic small RNA (size selected RNA from t. (breast)
SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)
SRR191515(GSM715625)
4genomic small RNA (size selected RNA from to. (breast)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040037(GSM532922)
G243T. (cervix)
SRR189787SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
GSM532929(GSM532929)
G702N. (cervix)
GSM532875(GSM532875)
G547N. (cervix)
SRR040016(GSM532901)
G645N. (cervix)
SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)
SRR191476(GSM715586)
19genomic small RNA (size selected RNA from t. (breast)
SRR191501(GSM715611)
8genomic small RNA (size selected RNA from to. (breast)
SRR191509(GSM715619)
156genomic small RNA (size selected RNA from . (breast)
SRR191434(GSM715544)
171genomic small RNA (size selected RNA from . (breast)
SRR191489(GSM715599)
147genomic small RNA (size selected RNA from . (breast)
SRR191491(GSM715601)
150genomic small RNA (size selected RNA from . (breast)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR191425(GSM715535)
141genomic small RNA (size selected RNA from . (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR191629(GSM715739)
5genomic small RNA (size selected RNA from to. (breast)
SRR040031(GSM532916)
G013T. (cervix)
SRR191494(GSM715604)
157genomic small RNA (size selected RNA from . (breast)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
SRR191403(GSM715513)
44genomic small RNA (size selected RNA from t. (breast)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR040039(GSM532924)
G531T. (cervix)
SRR191559(GSM715669)
65genomic small RNA (size selected RNA from t. (breast)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191627(GSM715737)
45genomic small RNA (size selected RNA from t. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040006(GSM532891)
G601N. (cervix)
SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)
DRR001483(DRX001037)
"Hela long cytoplasmic cell fraction, control. (hela)
SRR191404(GSM715514)
47genomic small RNA (size selected RNA from t. (breast)
SRR191564(GSM715674)
87genomic small RNA (size selected RNA from t. (breast)
SRR015365(GSM380330)
Memory B cells (MM139). (B cell)
SRR191522(GSM715632)
93genomic small RNA (size selected RNA from t. (breast)
GSM532882(GSM532882)
G696T. (cervix)
SRR191422(GSM715532)
129genomic small RNA (size selected RNA from . (breast)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR191602(GSM715712)
60genomic small RNA (size selected RNA from t. (breast)
SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)
SRR191445(GSM715555)
110genomic small RNA (size selected RNA from . (breast)
SRR191453(GSM715563)
179genomic small RNA (size selected RNA from . (breast)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR191455(GSM715565)
181genomic small RNA (size selected RNA from . (breast)
GSM532886(GSM532886)
G850T. (cervix)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR191632(GSM715742)
78genomic small RNA (size selected RNA from t. (breast)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR191497(GSM715607)
17genomic small RNA (size selected RNA from t. (breast)
SRR191446(GSM715556)
140genomic small RNA (size selected RNA from . (breast)
DRR001487(DRX001041)
"Hela long nuclear cell fraction, LNA(+)". (hela)
SRR191413(GSM715523)
28genomic small RNA (size selected RNA from t. (breast)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR444044(SRX128892)
Sample 5cDNABarcode: AF-PP-340: ACG CTC TTC C. (skin)
SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
................................................................................................................................................................................................CGCCCCGTCCCCCTCCCGT....................................... 1932.000.00----------------------------------------------------------------------------------------------------------------------------------------1.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGCACCGCCCCCGCCCGT................................................................. 182.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------
...GTCGGGAGAAACTGAGG...................................................................................................................................................................................................................................... 1721.501.50---------------------------------------------------------1.50--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................GGGCACCCCTCGGGGGGGC.................................................................................................................... 191.000.00---------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................ACACTAGGTACCTTCAGAT............................................................................................................................................................................................ 191.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
.......................................................................................................................................................................CGCACCGCCCCCGCCTGC................................................................. 181.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------
...........TCTCCCGACGTCCTCGATGGCTT........................................................................................................................................................................................................................ 231.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------
...........................................................................................................GCGGCCGAGGGCACCCG.............................................................................................................................. 171.000.00---------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGCACCGCCCCCGCCTCGCG............................................................... 201.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................CCGCAAAATGCCGCGGGGCCTCA........................................................................................................................................... 2311.001.00--------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CACCGCCCCCGCCTCTGCT.............................................................. 191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------------
...................................................................................................................GGGCACCCCTCGGGGGGG..................................................................................................................... 181.000.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
......................................................................................GCTGAGGCCCCGCGGCC................................................................................................................................................... 171.000.00---------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................CGCACCGCCCCCGCCTCG................................................................. 181.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
......................................................................AGCGTGTGGAGCTGCTCGG................................................................................................................................................................. 1911.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................CCCGCCCCGTCCCCCTTGTT........................................ 201.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------
...........GCCATCGAGGACGTCGGGAGA.......................................................................................................................................................................................................................... 2111.001.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------
.................................................................CAGCGTGTGGAGCTGCTCGGGAGGT................................................................................................................................................................ 2511.001.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
.........................................................CTGCTCGGGAGGTCGAACCCG............................................................................................................................................................................ 2111.001.00--------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................GCGGCCGAGGGCACCCCGG............................................................................................................................ 191.000.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------
............GGCGCCATCGAGGACGTCGGGAG....................................................................................................................................................................................................................... 2311.001.00---------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...........CATCGAGGACGTCGGGAGA............................................................................................................................................................................................................................ 1911.001.00------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----------
...........................................................................................................GCGGCCGAGGGCACCCCGGCT.......................................................................................................................... 211.000.00---------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
...ATCGAGGACGTCGGGAGAAACTGAGG............................................................................................................................................................................................................................. 2611.001.00---------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........TCGAGGACGTCGGGAGAAA.............................................................................................................................................................................................................................. 1911.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------------------------
...................................................................................................................GGGCACCCCTCGGGGGGCC.................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
................................................................................................................................................................................................AGCGGGAGGGGGACGGGGCG...................................... 2011.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................................................................CGGGAGGGGGACGGGGCGGG........................................ 2030.670.67---------------------------------------------------0.33------------------------0.33-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................CGGGAGGGGGACGGGGCG........................................ 1830.330.33-----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.33------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................CGGGAGGGGGACGGGGC........................................ 1740.250.25----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------0.25-
............................................................................................................................................................................................GGGGGACGGGGCGGGGC............................................. 1770.140.14--------------------------------------------------------------------------------------------------------------------------0.14---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------