ID: uc010rez.1_intron_2_0_chr11_36120012_f.3p
GENE: LDLRAD3(3)
chr11:36205343-36205592+


(1)
AGO2.ip 		(1)
B-CELL 		(2)
BRAIN 		(2)
BREAST 		(11)
CELL-LINE 		(1)
CERVIX 		(1)
OTHER 		(11)
SKIN

Sense strand
CTTTCTGCTGCGTTCTGAATAATTCTTCTTGAGCTATCATTCAGTTCATTTATTCTTTTTTCATCTGTGTCTAATCTACGGTTAAGTGGGTCCATTGAGTTTTTAATTTTAGCTACAGTATTTTTCACTTCTAGATGTTCTATTTGGTTCTTTTTCCAAATATATTTCATCTTTTTTTTTTTTTTTTTCCCGAGATGGAGTTTCGCTCTTGTTGCCCAGCCTGGAATGCAGTGGCACATCTCGGCTCACC
....................................................................................................................................(((((...(((((((........))))))).....)))))..............................................................................
...................................................................................................100.............................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTAGG...........................................................2425.000.00-9.0011.003.002.00-------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTCTT.......................................................2624.000.00-10.008.002.001.00-3.00-----------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTAAGG..........................................................2513.000.00-7.002.003.001.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGG.......................................................2412.000.009.00----3.00------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTTCG.........................................................2610.000.00-7.003.00---------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCAAG.........................................................266.000.00--1.002.003.00-------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCCAG........................................................2816.002.00-1.001.003.001.00-------------------------
........................................................................................................AATTTTAGCTACAGTAATC...............................................................................................................................196.000.00-------6.00----------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGGG.......................................................225.000.005.00-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTATT...........................................................255.000.00-5.00----------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGGCG......................................................235.000.005.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTTCT.........................................................265.000.00-2.003.00---------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTAAT.........................................................264.000.00--1.001.002.00-------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTTG..........................................................264.000.00---2.001.00-1.00-----------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTAACG..........................................................254.000.00-3.00-1.00--------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTTTTTTTTTG..........................................................304.000.00-1.001.001.001.00-------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTATAG..........................................................254.000.00-2.001.00-1.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGCG.......................................................244.000.004.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGGGG........................................................254.000.004.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGGG......................................................243.000.002.00----1.00------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGG.......................................................233.000.002.00---1.00-------------------------
..........................................................................................................................................................................CTTTTTTTTTTTTTTTTTCCCTCAG.......................................................253.000.00--1.001.001.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGCG......................................................253.000.003.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGG........................................................233.000.003.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCG..........................................................2382.382.38-0.250.620.750.75-------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTATTT..........................................................252.000.00-1.00--1.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGC.......................................................242.000.001.00----1.00------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGTC.......................................................242.000.001.00----1.00------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTATTG..........................................................262.000.00--2.00---------------------------
............................................TTCATTTATTCTTTTTTTTG..........................................................................................................................................................................................202.000.00--2.00---------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGG........................................................222.000.001.00-----1.00-----------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTTAA.........................................................262.000.00---2.00--------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCACG........................................................272.000.00---2.00--------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCCG.........................................................2712.002.00---2.00--------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTATT...........................................................262.000.00-1.00-1.00--------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGGGG.........................................................252.000.002.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGGG......................................................252.000.002.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCGG.........................................................2512.001.002.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTAT............................................................252.000.00-1.001.00---------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCG..........................................................2612.002.00-1.001.00---------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCAAAG........................................................272.000.00--1.001.00--------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTTGG.........................................................262.000.00-1.00--1.00-------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTCG..........................................................242.000.001.00-1.00---------------------------
...............................................................................................................................................................................TTTTTTTTTTTTTCCCGAGGGGG....................................................232.000.002.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCCAG........................................................272.000.00--1.001.00--------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGGGG.......................................................212.000.002.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCTT...........................................................262.000.00--1.00-1.00-------------------------
...............................................................................................................................................................................TTTTTTTTTTTTTCCCGGGC.......................................................202.000.001.00----1.00------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGG........................................................212.000.002.00-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCCCG........................................................2812.002.00---1.001.00-------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTG..................................................................222.000.00-1.00--1.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGAG......................................................252.000.00-----2.00------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTAAA.........................................................262.000.00---2.00--------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTTGG.........................................................252.000.001.00--1.00--------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTCAG.......................................................262.000.00-1.00--1.00-------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCC...........................................................2512.002.001.00----1.00------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCCTG........................................................272.000.00---2.00--------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTATAT...........................................................271.000.00--1.00---------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCAAAG.......................................................261.000.00----1.00-------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCAGG.........................................................261.000.00----1.00-------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGGGC......................................................251.000.001.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTACC...........................................................261.000.00-----1.00------------------------
.......................................................................................................................................................................................................GTTTCGCTCTTGTTGCCGAGT..............................211.000.00-----------------------------1.00
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCCCCTG........................................................291.000.00----1.00-------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCTCCG.......................................................271.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTAGT.........................................................261.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTCTTG..............................................................251.000.00----1.00-------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTTTTAG............................................................271.000.00---1.00--------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGAAC........................................................251.000.00-----1.00------------------------
..........................................................................................................................................................................................................TCGCTCTTGTTGCCCAGCCGGGA.........................231.000.00-----1.00------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTTTTTTTA............................................................281.000.00-1.00----------------------------
............................................TTCATTTATTCTTTTTTTCG..........................................................................................................................................................................................201.000.00---1.00--------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTACC...........................................................251.000.00-1.00----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTGGG.........................................................271.000.001.00-----------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGAGAAAG....................................................241.000.001.00-----------------------------
...................................................................................................................................................................................................TGGAGTTTCGCTCTTGTTGCCCAGCCCGG..........................291.000.00-----1.00------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCATAG.......................................................271.000.00----1.00-------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGGGC.........................................................251.000.001.00-----------------------------
................................................................................................................................................................................TTTTTTTTTTTTCCCGGGC.......................................................191.000.001.00-----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTCCGG............................................................261.000.00--1.00---------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGGAG......................................................231.000.00-----1.00------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTAAC.........................................................271.000.00---1.00--------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTTTTTTCG..........................................................291.000.00------1.00-----------------------
.................................................................................................................................................................ATATTTCATCTTTTTTTCGGA....................................................................211.000.001.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGT.......................................................231.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCG..........................................................2511.001.00----1.00-------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCAAG........................................................271.000.00-1.00----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGAACT......................................................251.000.001.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGCTT......................................................251.000.00-----1.00------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCTG.........................................................251.000.00---1.00--------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCCCAG.......................................................271.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTAG...............................................................241.000.00-1.00----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGTG......................................................241.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGGGT.........................................................251.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTCCAG..............................................................251.000.00------1.00-----------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTGCG.................................................................191.000.00---1.00--------------------------
.................................................................................................................................................................................TTTTTTTTTTTCCCGGGCC......................................................191.000.001.00-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCGGT..........................................................261.000.001.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCGAG..........................................................271.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTAAAG.............................................................261.000.00---1.00--------------------------
........................................................................................................AATTTTAGCTACAGTAGTA...............................................................................................................................191.000.00----------------1.00-------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTCGG.........................................................251.000.00-----1.00------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGGCC.........................................................251.000.001.00-----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTAAAC...............................................................231.000.00--1.00---------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTAAAA..........................................................261.000.00-1.00----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTTAACC..........................................................281.000.00-1.00----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCATC..........................................................261.000.00------1.00-----------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGAGGCAC....................................................261.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTGC.................................................................221.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCCTG........................................................261.000.001.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGAGGCC.....................................................261.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCATTG.......................................................261.000.00----1.00-------------------------
........................................................................................................AATTTTAGCTACAGTACTG...............................................................................................................................191.000.00------------1.00-----------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGGC..........................................................241.000.001.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTAACC..........................................................271.000.00--1.00---------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGGTT.......................................................211.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTCTC.........................................................251.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTACAG..........................................................251.000.00--1.00---------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCG............................................................251.000.00----1.00-------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTTC..........................................................261.000.001.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTATC...........................................................261.000.001.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGAAG......................................................251.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCTGC........................................................261.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCGAGG.........................................................251.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTAT...............................................................241.000.00--1.00---------------------------
..........................................................................................................................................................................CTTTTTTTTTTTTTTTTTCCCGGGG.......................................................251.000.001.00-----------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGCCC......................................................231.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTGG..........................................................251.000.00-1.00----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTCAT............................................................261.000.001.00-----------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTAAG.................................................................231.000.00---1.00--------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGTGG........................................................251.000.00-----1.00------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTAGG.........................................................251.000.00--1.00---------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTAGG.......................................................261.000.00---1.00--------------------------
................................................................................................................................................................................TTTTTTTTTTTTCCCGAGCCG.....................................................211.000.001.00-----------------------------
...............................................................................................................................................................................TTTTTTTTTTTTTCCCGAGAAGC....................................................231.000.00-----1.00------------------------
...............................................................................................................................................................................TTTTTTTTTTTTTCCCGGGGG......................................................211.000.001.00-----------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGGGAG......................................................221.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTCAG.........................................................251.000.00----1.00-------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGC.......................................................231.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGC..........................................................231.000.001.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGCCG......................................................241.000.001.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGCG......................................................241.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCCCAG.......................................................281.000.00----1.00-------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCGGGC.......................................................2811.001.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTTTG.......................................................261.000.00--1.00---------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGGTT........................................................251.000.001.00-----------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGGGG......................................................231.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTATG.......................................................261.000.00-1.00----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCCGGC.........................................................281.000.001.00-----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTCCCG...........................................................271.000.00--1.00---------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCGGTC........................................................261.000.00-----1.00------------------------
..............................................................................................................................................................................................CGAGATGGAGTTTCGCTCTTGTTGCGC.................................271.000.00-------------------------1.00----
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGGTT......................................................231.000.00-----1.00------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTGTG................................................................231.000.00---1.00--------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTTCTT...........................................................271.000.00--1.00---------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCGAGC.........................................................261.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGCAC........................................................251.000.001.00-----------------------------
..........................................................................................................................................................................CTTTTTTTTTTTTTTTTTCCGGCG........................................................241.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCATTG........................................................271.000.00--1.00---------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCGAG..........................................................251.000.001.00-----------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTTGG................................................................241.000.00----1.00-------------------------
...............................................................................................................................................................................TTTTTTTTTTTTTCCCGAAGAG.....................................................221.000.00---1.00--------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCGTG.........................................................241.000.00-1.00----------------------------
..........................................................................................................................................................................................................................GCCTGGAATGCAGTGGCATGGA..........221.000.00--------------1.00---------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTACCG...........................................................271.000.00--1.00---------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCGGC..........................................................261.000.001.00-----------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTCTGC............................................................251.000.00-----1.00------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCAAG..........................................................261.000.00----1.00-------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTCTTT............................................................261.000.00---1.00--------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTAGAG..........................................................271.000.001.00-----------------------------
............................................................................TACGGTTAAGTGGGTCCATTGAGTTT....................................................................................................................................................2611.001.00---------1.00--------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCCCGGCT.......................................................2811.001.001.00-----------------------------
...........................................................................................................................................................................................................................CCTGGAATGCAGTGGCCCGA...........201.000.00------------------1.00-----------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTCTAAC.........................................................261.000.00--1.00---------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTATG.........................................................271.000.00-1.00----------------------------
.................................................................................................................................................................ATATTTCATCTTTTTTTTTTTTTTG................................................................251.000.00--1.00---------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTAG.................................................................231.000.00---1.00--------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCTCTG.......................................................271.000.00----1.00-------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCTTTG.........................................................281.000.00----1.00-------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTTTCTTG...........................................................281.000.00------1.00-----------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTGG........................................................251.000.00-----1.00------------------------
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTAATG..........................................................271.000.00--1.00---------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGGT......................................................241.000.001.00-----------------------------
...................................................................................................................................................................................................TGGAGTTTCGCTCTTGTTGCCGAGG..............................251.000.00-----------------1.00------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTAGG...............................................................231.000.00---1.00--------------------------
......................................................................................................................................................................................................................................GTGGCACATCTCGGCCAAC.191.000.00--------------------------1.00---
.....................................................................................................................................................................TTCATCTTTTTTTTTTTTTTTTTCTTT..........................................................271.000.00---1.00--------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCCG.........................................................251.000.00---1.00--------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGCG.......................................................231.000.001.00-----------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGAGGGGA....................................................241.000.00-----1.00------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTTTTGGAA..........................................................291.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCGGTC.......................................................2711.001.00-----1.00------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTTAAG...........................................................271.000.00-1.00----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCTGGG.........................................................251.000.001.00-----------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGCCC......................................................251.000.001.00-----------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGTTG......................................................231.000.00-----1.00------------------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGGACG......................................................251.000.001.00-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCTTTA.........................................................271.000.00-1.00----------------------------
..........................................................................................................................................................................CTTTTTTTTTTTTTTTTTCCCTTTG.......................................................251.000.00----1.00-------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTACAG.............................................................261.000.00---1.00--------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCCCAG.......................................................2911.002.00---1.00--------------------------
......................................................................................................................................................................................................AGTTTCGCTCTTGTTGCCCAGCGGG...........................251.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTCCC.......................................................261.000.001.00-----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGTC.......................................................231.000.00-----1.00------------------------
.....................................................TCTTTTTTCATCTGTGCG...................................................................................................................................................................................181.000.00---------1.00--------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGTTT......................................................241.000.001.00-----------------------------
...................................................................................................................................................................ATTTCATCTTTTTTTTTTTTTTTTCTGG...........................................................281.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCACG........................................................251.000.00-1.00----------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGAGGTG.....................................................251.000.00-----1.00------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTGGG.......................................................261.000.001.00-----------------------------
.......................................................................................................................................................................CATCTTTTTTTTTTTTTTTTTACTG..........................................................251.000.00---1.00--------------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGAGC.......................................................221.000.00-----1.00------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTTCG.......................................................261.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCAT.........................................................251.000.00-1.00----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCCAG........................................................261.000.00---1.00--------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGGCC......................................................241.000.001.00-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCACC........................................................251.000.001.00-----------------------------
........................................................................................................................................................................ATCTTTTTTTTTTTTTTTTTCCCG..........................................................2411.001.00----1.00-------------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGGAAG......................................................221.000.001.00-----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTTTCCCCTG........................................................301.000.00--1.00---------------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTTTTTCG................................................................241.000.00---1.00--------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCTTAT.......................................................261.000.00----1.00-------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCCCAT........................................................2811.002.00---1.00--------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTTTCTTC............................................................261.000.00------1.00-----------------------
..................................................................................................................................................................TATTTCATCTTTTTTTTTCTG...................................................................211.000.00---1.00--------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTATG................................................................221.000.00--1.00---------------------------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGGCCC......................................................241.000.001.00-----------------------------
....................................................................................................................................................................TTTCATCTTTTTTTTTTTTTCAAG..............................................................241.000.00----1.00-------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGG.........................................................2480.502.380.120.120.12-0.12-------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGAG........................................................2570.290.290.14----0.14------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGAGC.......................................................2670.140.290.14-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCAT..........................................................2680.120.12---0.12--------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCC............................................................2480.120.12-----0.12------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGGG.......................................................2680.122.380.12-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGT........................................................2580.122.380.12-----------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCAGG.........................................................2780.120.120.12-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGTTT......................................................2780.122.38-----0.12------------------------
......................................................................................................................................................................TCATCTTTTTTTTTTTTTTTTTCCGCTG........................................................2880.120.120.12-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGAGG......................................................2780.122.380.12-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGG........................................................2580.122.380.12-----------------------------
.........................................................................................................................................................................TCTTTTTTTTTTTTTTTTTCCCGGCT.......................................................2680.122.380.12-----------------------------

Antisense strand
CTTTCTGCTGCGTTCTGAATAATTCTTCTTGAGCTATCATTCAGTTCATTTATTCTTTTTTCATCTGTGTCTAATCTACGGTTAAGTGGGTCCATTGAGTTTTTAATTTTAGCTACAGTATTTTTCACTTCTAGATGTTCTATTTGGTTCTTTTTCCAAATATATTTCATCTTTTTTTTTTTTTTTTTCCCGAGATGGAGTTTCGCTCTTGTTGCCCAGCCTGGAATGCAGTGGCACATCTCGGCTCACC
....................................................................................................................................(((((...(((((((........))))))).....)))))..............................................................................
...................................................................................................100.............................................................................................195.....................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR343334SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191607(GSM715717)
192genomic small RNA (size selected RNA from . (breast)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR040036(GSM532921)
G243N. (cervix)		SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)		SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..............................................................................................................................................................................................................TCTTGTTGCCCAGCCTGTCG........................ 201.000.00---------------1.00--------------
...........................................................................................................................................................................TTTTTTTTTTTTTTTTTCCCGTC........................................................ 231.000.00-------1.00----------------------
................................................................................................................................................................................TTTTTTTTTTTTCCCGTTT....................................................... 191.000.00-------------1.00----------------
.................................................................................................................................................................................................................TGTTGCCCAGCCTGGAATGTT.................... 211.000.00--------1.00---------------------
..................................................................................................................................................................................................................GTTGCCCAGCCTGGAATGCAGCGAG............... 251.000.00-----------1.00------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGGATT...................................................... 231.000.00----------1.00-------------------
..................................................................................................................................................................................................................GTTGCCCAGCCTGGAATCGAG................... 211.000.00-----------------------1.00------
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCGCC........................................................ 221.000.00---------------------1.00--------
.................................................................................................................................................................................TTTTTTTTTTTCCCGGGT....................................................... 181.000.00-------------------1.00----------
.....................................................................................................................................................................................................GAGTTTCGCTCTTGTTGCCCAGCA............................. 241.000.00----------------------------1.00-
............................................................................................................................................................................TTTTTTTTTTTTTTTTCCCTTTT....................................................... 231.000.00----------------------1.00-------
..................................................................................................................................................................................................................GTTGCCCAGCCTGGAATGTTT................... 211.000.00--------1.00---------------------
..............................................................................................................................................................................TTTTTTTTTTTTTTCCCGTTTT...................................................... 221.000.00----------1.00-------------------
.............................................................................................................................................................................TTTTTTTTTTTTTTTCCCGTTTT...................................................... 231.000.00------------------------1.00-----
.................................................................................................................................................................................................................TGTTGCCCAGCCTGGAATTTTT................... 221.000.00--------------------1.00---------
................................................................................................................................................................................................................CTGCATTCCAGGCTGGGCAACAA................... 2360.170.17--------0.17---------------------