uc010qxr.1_intron_3_0_chr11_3392934

AGGAAATCCCAGAGAAGCAGGAGAAAGAGAAAGAAATGGCTGGTGCTCAGGTAAATGCATCTCAGGTCAGGGGTTGTGTCCACTTTTGCTCCTGAAATGTCATGTGTTTAGAATTTGGAAACCTTTACTTCTCTACTTGTGGTGTTTCTCCATAGTAAGTTTGTTTCAACTACTTTTTTTTCTTATAATAATGAAGGGTCTCTGAAAATATTTGTTTTCTATATACCAAAGCCGTCTCTCTGTTATCTTC ...................................................(((((((((..((..((((((((.((....))....))))))))..))..))))))))).......(((((....(((....(((.(((((.......)))))))))))..)))))................................................................................... ..................................................51...........................................................................................................................................192........................................................	Size	Perfect hit	Total Norm	Perfect Norm	SRR189778(GSM714638) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)	SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell)	SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line)	SRR029131(GSM416760) MCF7. (cell line)	SRR189776(GSM714636) cell line: HEK293clip variant: CLIPenzymatic . (cell line)	SRR330898(SRX091736) tissue: skin psoriatic uninvolveddisease stat. (skin)	SRR189782	SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
........................................................................................................................................................................ACTACTTTTTTTTCTTTTTG..............................................................	20		39.00	0.00	15.00	14.00	4.00	2.00	2.00	-	-	-	1.00	-	1.00	-
..................................................GTAAATGCATCTCAGGTCAG....................................................................................................................................................................................	20	1	3.00	3.00	-	-	-	-	-	-	3.00	-	-	-	-	-
..............................................................................................................................................................................................................................ATACCAAAGCCGTCTCTCTGTTA.....	23	1	3.00	3.00	-	-	-	-	-	3.00	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTGCTC...............................................................	19		2.00	0.00	-	-	2.00	-	-	-	-	-	-	-	-	-
..................................................GTAAATGCATCTCAGGTA......................................................................................................................................................................................	18		2.00	0.00	-	-	-	-	-	-	-	2.00	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTTTTCG..............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
...................................................................................................................................................................TTTCAACTACTTTTTTTTCTTATAATAATG.........................................................	30	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTCCTG...............................................................	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTGCCC...............................................................	19		1.00	0.00	-	-	-	-	-	-	-	-	-	-	-	1.00
.........................................................................................................................................................................CTACTTTTTTTTCTTAGT...............................................................	18		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTCTTG...............................................................	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-
...........................................................................................................................................................................ACTTTTTTTTCTTATATCA............................................................	19		1.00	0.00	-	-	-	1.00	-	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTTAAAG..............................................................	20		1.00	0.00	-	-	-	-	-	-	-	-	1.00	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTTTTCA..............................................................	20		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTCAACTACTTTTTTTTCTTATAATAATG.........................................................	29	1	1.00	1.00	-	-	-	1.00	-	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTTTTAG..............................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................CTACTTTTTTTTCTTAATTT.............................................................	20		1.00	0.00	-	1.00	-	-	-	-	-	-	-	-	-	-
.........................................................................................................................................................................CTACTTTTTTTTCTTATTTTG............................................................	21		1.00	0.00	1.00	-	-	-	-	-	-	-	-	-	-	-
....................................................................................................................................................................TTCAACTACTTTTTTACTT...................................................................	19		1.00	0.00	-	-	-	-	1.00	-	-	-	-	-	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTTTGAG..............................................................	20		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-
.............................................................TCAGGTCAGGGGTTGTGTCCACTTTTGC.................................................................................................................................................................	28	1	1.00	1.00	-	-	-	-	-	-	-	-	-	1.00	-	-
........................................................................................................................................................................ACTACTTTTTTTTCTGCT................................................................	18		1.00	0.00	-	-	1.00	-	-	-	-	-	-	-	-	-

AGGAAATCCCAGAGAAGCAGGAGAAAGAGAAAGAAATGGCTGGTGCTCAGGTAAATGCATCTCAGGTCAGGGGTTGTGTCCACTTTTGCTCCTGAAATGTCATGTGTTTAGAATTTGGAAACCTTTACTTCTCTACTTGTGGTGTTTCTCCATAGTAAGTTTGTTTCAACTACTTTTTTTTCTTATAATAATGAAGGGTCTCTGAAAATATTTGTTTTCTATATACCAAAGCCGTCTCTCTGTTATCTTC
...................................................(((((((((..((..((((((((.((....))....))))))))..))..))))))))).......(((((....(((....(((.(((((.......)))))))))))..)))))...................................................................................
..................................................51...........................................................................................................................................192........................................................

Size

Perfect hit

Total Norm

Perfect Norm

SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)

SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)

SRR029131(GSM416760)
MCF7. (cell line)

SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)

SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)

SRR189782

SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)

........................................................................................................................................................................ACTACTTTTTTTTCTTTTTG..............................................................

39.00

0.00

15.00

14.00

4.00

2.00

1.00

..................................................GTAAATGCATCTCAGGTCAG....................................................................................................................................................................................

3.00

..............................................................................................................................................................................................................................ATACCAAAGCCGTCTCTCTGTTA.....

3.00

........................................................................................................................................................................ACTACTTTTTTTTCTGCTC...............................................................

2.00

0.00

2.00

..................................................GTAAATGCATCTCAGGTA......................................................................................................................................................................................

2.00

0.00

2.00

........................................................................................................................................................................ACTACTTTTTTTTCTTTTCG..............................................................

1.00

0.00

1.00

...................................................................................................................................................................TTTCAACTACTTTTTTTTCTTATAATAATG.........................................................

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTCCTG...............................................................

1.00

0.00

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTGCCC...............................................................

1.00

0.00

1.00

.........................................................................................................................................................................CTACTTTTTTTTCTTAGT...............................................................

1.00

0.00

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTCTTG...............................................................

1.00

0.00

1.00

...........................................................................................................................................................................ACTTTTTTTTCTTATATCA............................................................

1.00

0.00

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTTAAAG..............................................................

1.00

0.00

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTTTTCA..............................................................

1.00

0.00

1.00

....................................................................................................................................................................TTCAACTACTTTTTTTTCTTATAATAATG.........................................................

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTTTTAG..............................................................

1.00

0.00

1.00

.........................................................................................................................................................................CTACTTTTTTTTCTTAATTT.............................................................

1.00

0.00

1.00

.........................................................................................................................................................................CTACTTTTTTTTCTTATTTTG............................................................

1.00

0.00

1.00

....................................................................................................................................................................TTCAACTACTTTTTTACTT...................................................................

1.00

0.00

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTTTGAG..............................................................

1.00

0.00

1.00

.............................................................TCAGGTCAGGGGTTGTGTCCACTTTTGC.................................................................................................................................................................

1.00

........................................................................................................................................................................ACTACTTTTTTTTCTGCT................................................................

1.00

0.00

1.00