ID: uc010qsu.1_intron_13_0_chr10_120820357_r
GENE: (8)
chr10:120820307-120820785-


(2)
AGO2.ip
(1)
AGO3.ip
(5)
B-CELL
(8)
BREAST
(27)
CELL-LINE
(5)
CERVIX
(3)
HEART
(2)
HELA
(4)
LIVER
(1)
OTHER
(1)
RRP40.ip
(29)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GGCTTGAAGTAGAATTTAACCCATTAAAACTCTGTGAGCGAGTCACAAAGGTAAGCCTTTGTATTTAAGTTCTGGTTGTTACCACAGAGTTGGCCTTCTTGCAGTTTTGGGTTGTATTCATATTTGTTAAGAGAGAAGTTTTGTCCTATGTGTTGGAATTCAGTGCACATTTCATTGTCTTTTTTCTTTATTTCAAGAGAAAAGATATATCTGATGTGCTCAGCAAACCTTTGGAGGTTAATTAGCAGCATGACTAATTTAGCCATTGCTGCCAGTCACCTTCAAACAAGTATCAGTAGCTTCATGATACATTTTGTATTTCTTTGCATTGGATGATGTTTTTGTATATTAAAAAAAAAAGAGTTTTAGATGTTTTAGTATCTCTTATGTAGAAAGTGTGATTCTCTTTCAATTTAATGGATTTTATAGGTTCTAAATTGGGTTAGGGAACAACCTGAAAAGGAACCGGAATTGCAGCA
...................................................(((..((((...(((((....((((....))))..((((((((((............)))))).)))).......)))))...))))..)))................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.......................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189787SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR038858(GSM458541)
MEL202. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCTGAAAAGGAACCGGA.........22135.0035.00-1.007.0010.00-----1.00-2.00-----------1.00-2.001.00----1.001.00-------1.00--1.00-----------1.00----------1.00--1.00---1.00---1.00-1.00------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAATTGGGTTAGGG...............................18121.0021.0016.004.001.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAATTGGGTTAGGG...............................17120.0020.0015.005.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGAAAAGGAACCGG..........1819.009.007.002.00------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTAAATTGGGTTAGGG...............................1918.008.00-6.002.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAATTGGGTTAGGGA..............................1718.008.008.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCATG...................................................................................................................................................................................................................................2317.007.00-4.00------1.00---------2.00-------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCTGAAAAGGAACCGGA.........2117.007.00----------------------2.00--------------1.00------1.00-------------------1.00-------1.00---1.00---------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGGGTTAGGGAAC............................1727.007.006.001.00------------------------------------------------------------------------------------------
.......AGTAGAATTTAACCCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.006.006.00-------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GTGCTCAGCAAACCTTTGGAGGTTAATTAGCAGCATGACTAATTTAGCCATTGCTGCCAGTCACCTTCAAACAAGTATCAGTAG....................................................................................................................................................................................8415.005.00----5.00---------------------------------------------------------------------------------------
.............ATTTAACCCATTAAAACTCTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005.00-----------1.00-----1.00--------1.00--------------------1.00---------------1.00----------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCTGAAAAGGAACCGG..........2015.005.00-----------------------------------1.00---------1.00----------1.00-----------------1.00-----------1.00-----
....................................................................................................................................................................................................................................CTTTGGAGGTTAATTAGCAGCA.....................................................................................................................................................................................................................................2215.005.00-----5.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGA.........1815.005.005.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGG..........1724.004.003.50-----------------------------------0.50-------------------------------------------------------
..........................................................................................................................................................................................................................CTCAGCAAACCTTTGGAGGTTAATTAGCAGCATGACTAATTTAGCCATTGCTGCCAGTCACCTTCAAACAAGT............................................................................................................................................................................................7314.004.00----4.00---------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCAT....................................................................................................................................................................................................................................2213.003.00-------------------------------------------------1.00---1.00-----1.00--------------------------------
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAACCGGAATTGCAGCA1913.003.00------3.00-------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCTGAAAAGGAACCGG..........1913.003.003.00-------------------------------------------------------------------------------------------
...................CCCATTAAAACTCTGTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003.003.00-------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAAGGAACCGGAATT......1912.002.00----------2.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGAAAAGGAACCGGA.........1912.002.00-1.001.00-----------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAATTGGGTTAGG................................1712.002.002.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAATTGGGTTAGGGAACAAC.........................2212.002.00------------------------2.00-------------------------------------------------------------------
..................ACCCATTAAAACTCTGTGAGCGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00--1.00-----------------------------------------------------------------------------1.00-----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACCTGAAAAGGAACCGG..........2212.002.00-2.00------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAAGGAACCGGAATTGCAGC.2412.002.00------------2.00-------------------------------------------------------------------------------
.............ATTTAACCCATTAAAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002.00---------------------------------------------------1.00-------------1.00--------------------------
......AAGTAGAATTTAACCCATTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00-2.00------------------------------------------------------------------------------------------
..................................................GTAAGCCTTTGTATTTAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--2.00-----------------------------------------------------------------------------------------
.......AGTAGAATTTAACCCATTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002.00--2.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................GTGCACATTTCATTGTCCTGC........................................................................................................................................................................................................................................................................................................212.000.00------------------------------------------------1.00---------------------1.00---------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGTTAGGGAACAACCT.......................2012.002.00---------2.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAACCGGAATTGCAGC.1912.002.00---------------------------1.00---------------------------------------------------------1.00------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTTAGGGAACAACCTGAAAAGGAACCGG..........3211.001.00------------------------------------1.00-------------------------------------------------------
......AAGTAGAATTTAACCCATTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-1.00------------------------------------------------------------------------------------------
......AAGTAGAATTTAACCCATTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCATGA..................................................................................................................................................................................................................................2411.001.00---------------1.00----------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................TGCTGCCAGTCACCTTCAAACT...............................................................................................................................................................................................221.000.00-------------1.00------------------------------------------------------------------------------
.......................................................................................................................ATATTTGTTAAGAGAGAAGTTTTGTCCT............................................................................................................................................................................................................................................................................................................................................2811.001.00--------------------1.00-----------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGAACAACCTGAAAAGGAACC............2411.001.00-------1.00------------------------------------------------------------------------------------
..........................................................................................................TTGGGTTGTATTCATATTTA.................................................................................................................................................................................................................................................................................................................................................................201.000.00-------------------1.00------------------------------------------------------------------------
........GTAGAATTTAACCCATTAAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------------------------------------1.00----------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TCTAAATTGGGTTAGGGA..............................1811.001.00-1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................TAGTATCTCTTATGTGTTT.....................................................................................191.000.00---------------------------------------1.00----------------------------------------------------
.........................AAAACTCTGTGAGCGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001.00-------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................AGCCATTGCTGCCAGTCACCTTCAAACA...............................................................................................................................................................................................2811.001.00---------------------------------------------------------------------------1.00----------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGGAATTGCAGCATT181.000.00----------1.00---------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCTGAAAAGGAACCGGAAT.......2311.001.00-----------------------------------------------------------------------------------------1.00--
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCATGT..................................................................................................................................................................................................................................2411.007.00--------------------------------1.00-----------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTAGGGAACAACTTTG.....................201.000.00------------------------------------------------------1.00-------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGAATT......2111.001.00--------------------------------------------------------------------1.00-----------------------
..........................................................................................................................................................................................................................................................................................................................................GGATGATGTTTTTGTAT....................................................................................................................................1711.001.00--1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGTTAGGGAACAACCTGAAAAGGAACCGG..........3311.001.00-------------------------------1.00------------------------------------------------------------
.................AACCCATTAAAACTCTGTGAGCGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------1.00--------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGAAAAGGAACCGGAATTGCAGC.2711.001.00------------------------------------------1.00-------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACCTGAAAAGGAACCGGAATTGC....2811.001.00--1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCTGAAAAGGAACTGGA.........221.000.00---1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................................TATTTCAAGAGAAAAGGGTT...............................................................................................................................................................................................................................................................................201.000.00---------------1.00----------------------------------------------------------------------------
..........AGAATTTAACCCATTAAAACTCTGTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001.00-1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTTAGGGAACAACCTGAAAAGGAACC............3011.001.00--------------------1.00-----------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................TTGCTGCCAGTCACCTTCAAAC................................................................................................................................................................................................2211.001.00-----------------------------------------------------------------------------------1.00--------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGAT........1911.005.00---------1.00----------------------------------------------------------------------------------
....................................................................................................................................................................................TTTTTCTTTATTTCAACATG.......................................................................................................................................................................................................................................................................................201.000.00----------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................GTGCACATTTCATTGATC...........................................................................................................................................................................................................................................................................................................181.000.00---------------------1.00----------------------------------------------------------------------
......AAGTAGAATTTAACCCATTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00-------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTAGGGAACAACCTGAAAAGGAA..............2711.001.00--------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAAAAGGAACCGGAA........1711.001.00-----------------------------------------------------------------------1.00--------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGAATTGCAGC.2611.001.00-------1.00------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGAACCGGAATTGCAGCA2311.001.00------------------------------------------------------------------------------------------1.00-
.........................................................................................................TTTGGGTTGTATTCATCA....................................................................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGGA.....................................................................................................................................................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCTGAAAAGGAACCGGAGA.......2411.0035.00--1.00-----------------------------------------------------------------------------------------
..CTTGAAGTAGAATTTAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................................................................................................................................TTTGCATTGGATGATTAA...........................................................................................................................................181.000.00-------------1.00------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAAAGGAACCGGAATTT.....211.000.00------1.00-------------------------------------------------------------------------------------
.GCTTGAAGTAGAATTTAACCCATT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCGGAATTGCAGCA1811.001.00----------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCACG...................................................................................................................................................................................................................................231.000.00--------1.00-----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAAAGGAACCGGA.........1711.001.00-----------------------------1.00--------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTAGGGAACAACCTGA.....................2011.001.00---------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGAATTGCAGCA2711.001.00--1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................CCATTGCTGCCAGTCACCTTCAAACA...............................................................................................................................................................................................2611.001.00-----------------------------------------1.00--------------------------------------------------
..................................................................................................................................................................GTGCACATTTCATTGATCT..........................................................................................................................................................................................................................................................................................................191.000.00---------------------1.00----------------------------------------------------------------------
................................................................................ACCACAGAGTTGGCCTTCTTGCAGTTTTGGG................................................................................................................................................................................................................................................................................................................................................................................3111.001.00-------------------------------------------------------------------1.00------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAAAGGAACCGGAATTG.....1911.001.00----------------------------------------------1.00---------------------------------------------
............AATTTAACCCATTAAAACTCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001.00-------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGAAAAGGAACCGGAATTGT....231.000.00------------------------------------------------------------------------------1.00-------------
............................ACTCTGTGAGCGAGTCACAAAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-1.00------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGCAA....................................................................................................................................................................................................................................221.000.00-------------------1.00------------------------------------------------------------------------
..CTTGAAGTAGAATTTAACCCATTAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------1.00----------------------------------------------------------------
................................TGTGAGCGAGTCACAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAACCGGAATTGCAGCA2211.001.00--------------1.00-----------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................TTGCTGCCAGTCACCTTCAAC.................................................................................................................................................................................................211.000.00--------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACAACCTGAAAAGGAACCGGAAT.......2511.001.00----------------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTTCAATTTAATGGATTTTATAG..................................................2611.001.00--1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACCTGAAAAGGAACC............1811.001.00--------------------------------------------------1.00-----------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACCTGAAAAGGAACCGG..........2111.001.00--1.00-----------------------------------------------------------------------------------------
......AAGTAGAATTTAACCCATTAAAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00-----------------------------1.00--------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACAACCTGAAAAGG................1711.001.00----------------------------1.00---------------------------------------------------------------
.......................TTAAAACTCTGTGAGCGAGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................221.000.00-------------------------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAACCGGAATTGCAGCA2111.001.00------------1.00-------------------------------------------------------------------------------
.......AGTAGAATTTAACCCATTCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.006.00--1.00-----------------------------------------------------------------------------------------
........................................................................................................................................AGTTTTGTCCTATGTAG......................................................................................................................................................................................................................................................................................................................................171.000.001.00-------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGAACCGGAATTGCA...2011.001.00--------------1.00-----------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTTAGGGAACAACCTGAAAAGGAACC............2911.001.00--------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCTGAAAAGGAACCGGAATTG.....2311.001.00----------------------------------------------------------1.00---------------------------------
.....................................................................................................................................................................................................................................TTTGGAGGTTAATTAGCAGC......................................................................................................................................................................................................................................2011.001.00-----------------1.00--------------------------------------------------------------------------
........................TAAAACTCTGTGAGCGAGTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................211.000.00----------------------------------------------------------------------------------------1.00---
.........................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTTATGTAGA......................................................................................1620.500.50-------------------------------------------------------------------------------------------0.50
............................................................................................................................................................................................................................................................................................................................................................................................................................TTTAATGGATTTTATAG..................................................1720.500.50-----------------------------------0.50--------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................................................................................AGAAAGTGTGATTCTCT........................................................................1740.250.25-------------------------------------0.25------------------------------------------------------
.......................TTAAAACTCTGTGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................1690.110.11--------------------------------------0.11-----------------------------------------------------

Antisense strand
GGCTTGAAGTAGAATTTAACCCATTAAAACTCTGTGAGCGAGTCACAAAGGTAAGCCTTTGTATTTAAGTTCTGGTTGTTACCACAGAGTTGGCCTTCTTGCAGTTTTGGGTTGTATTCATATTTGTTAAGAGAGAAGTTTTGTCCTATGTGTTGGAATTCAGTGCACATTTCATTGTCTTTTTTCTTTATTTCAAGAGAAAAGATATATCTGATGTGCTCAGCAAACCTTTGGAGGTTAATTAGCAGCATGACTAATTTAGCCATTGCTGCCAGTCACCTTCAAACAAGTATCAGTAGCTTCATGATACATTTTGTATTTCTTTGCATTGGATGATGTTTTTGTATATTAAAAAAAAAAGAGTTTTAGATGTTTTAGTATCTCTTATGTAGAAAGTGTGATTCTCTTTCAATTTAATGGATTTTATAGGTTCTAAATTGGGTTAGGGAACAACCTGAAAAGGAACCGGAATTGCAGCA
...................................................(((..((((...(((((....((((....))))..((((((((((............)))))).)))).......)))))...))))..)))................................................................................................................................................................................................................................................................................................................................................
..................................................51.................................................................................................150.......................................................................................................................................................................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
DRR001485(DRX001039)
"Hela long total cell fraction, LNA(+)". (hela)
SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR189787SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR033721(GSM497066)
Ly3 cell line (Ly3). (B cell)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR037943(GSM510481)
293DcrTN. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553576(SRX182782)
source: Testis. (testes)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR040042(GSM532927)
G428N. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040028(GSM532913)
G026N. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR343336SRR191407(GSM715517)
81genomic small RNA (size selected RNA from t. (breast)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
GSM532874(GSM532874)
G699T. (cervix)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191626(GSM715736)
36genomic small RNA (size selected RNA from t. (breast)
SRR040008(GSM532893)
G727N. (cervix)
SRR038858(GSM458541)
MEL202. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR038861(GSM458544)
MM466. (cell line)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189786SRR330858(SRX091696)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191560(GSM715670)
77genomic small RNA (size selected RNA from t. (breast)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191443(GSM715553)
108genomic small RNA (size selected RNA from . (breast)
SRR060169(GSM565979)
5-8F_cytoplasm. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
TAX577738(Rovira)
total RNA. (breast)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR038852(GSM458535)
QF1160MB. (cell line)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
.........................................................................................................................................................................................................................................................................................................................................................ATATTAAAAAAAAAAGAGTTAG................................................................................................................ 222.000.00---------------------------------1.00-----------------------------------------------------1.00----
.......................................................................................................................................................................................................................................................................................................................................................GTATATTAAAAAAAAAAGTG.................................................................................................................... 201.000.00----------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TAAAAAAAAAAGAGTTTTC............................................................................................................... 191.000.00----------------------------------1.00---------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................ATTAAAAAAAAAAGAGTGC................................................................................................................. 191.000.00----------------------------------1.00---------------------------------------------------------
..........................................................................................................................................................GGAATTCAGTGCACATT.................................................................................................................................................................................................................................................................................................................... 171.000.00------------------------------------------------------------------------------------1.00-------
........................................................................................................................................................................................................................................................................................................................................................TATATTAAAAAAAAAAGAGTTAAG............................................................................................................... 241.000.00------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................CATCTAAAACTCTTTTTTTTTTA........................................................................................................... 2311.001.00---------------------------------1.00----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................TAAAAAAAAAAGAGTTTCAG.............................................................................................................. 201.000.00------------------------------1.00-------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................AAACTCTTTTTTTTTTAATA................................................................................................................. 2050.200.20----------------0.20---------------------------------------------------------------------------