ID: uc010qqr.1_intron_0_0_chr10_105348697_r.3p
GENE: (7)
chr10:105348647-105348896-


(1)
AGO2.ip 		(1)
B-CELL 		(1)
BRAIN 		(2)
BREAST 		(14)
CELL-LINE 		(2)
CERVIX 		(4)
HEART 		(1)
HELA 		(2)
LIVER 		(1)
OTHER 		(9)
SKIN

Sense strand
TCCCCTGCCCCGCAACCTCACCCTCCTGTTCGGAGCCCTGAGCTCTTCACCACTGTCCCCAGATATCACCCACCTTTTCTGCATGGCACCTCTGCAGTGCCTTCACTTTTTCCCACCTTGTTCTGATCATAGATTCTCTCCTCCCCTCCTTCCTCCTTCCGTCACTCACTTCCTCTCCTTTTTTTTTTTTTTTTTTTCAGACGGAGTCTCGCTGTCGCCAGGCTGGAGTGCAGTGGCACGACCTCGGCTC

....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATC................................................2710.000.008.00-1.00--1.00---------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCAG..................................................2648.008.00-1.753.001.252.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCAG....................................................257.000.00-3.004.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATTG...............................................287.000.00-5.001.00-1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCCAG..................................................277.000.001.003.001.001.001.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCAG.................................................286.000.00--3.001.002.00----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTCCG...................................................255.000.00-3.001.00-1.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATTTG...............................................284.000.00--2.002.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTATT..................................................274.000.00-1.002.00---1.00--------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTCCCG..................................................263.000.00-1.002.00------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCCG.................................................283.000.00---1.002.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCG..................................................273.000.001.00-1.001.00-----------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTCCG.........................................................223.000.00-3.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCCG.................................................263.000.001.00--1.001.00----------------------------------
.........................................................................................................................................CTCCTCCCCTCCTTCCGCC..............................................................................................193.000.00--------1.00-1.00---------------1.00------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAAAAG...............................................273.000.00----3.00----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCCCG.................................................273.000.00-2.00--1.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATTTT...............................................283.000.00-1.001.001.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTAATG..................................................273.000.00-1.00-1.001.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACAG................................................273.000.00--1.00--1.001.00--------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCACAG................................................263.000.00----3.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCCG...................................................263.000.002.001.00-------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTATG..................................................273.000.001.001.00-1.00-----------------------------------
..................................................................................................................................................................................................................................AGTGCAGTGGCACGACCTCGGCCC243.000.003.00--------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTCCAG...................................................272.000.00-1.00-1.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCCCG................................................292.000.00--2.00------------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTTTTCAGGAG...............................................262.000.002.00--------------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTCCG.......................................................242.000.00-1.00--1.00----------------------------------
..............................................................................................................................................................................................................................CTGGAGTGCAGTGGCACGACTCTG....242.000.002.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACTG................................................272.000.00---1.001.00----------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTTCCCG.....................................................262.000.00----2.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAACC................................................272.000.002.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAAC.................................................252.000.00---1.00-1.00---------------------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACGACCTCGGGTC312.000.002.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCAC..................................................262.000.00-1.001.00------------------------------------
.........................................................................................................................................................................................TTTTTTTTTTTTCAGACGGAGTCTCGCCC....................................292.000.00-----2.00---------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCC..................................................272.000.002.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCAT....................................................252.000.00----2.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCGGG................................................272.000.002.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCGG.................................................262.000.001.00--1.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCCTG..................................................272.000.00---2.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCGG....................................................252.000.001.00----1.00---------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCCAG................................................292.000.001.001.00-------------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTGGC......................................................272.000.002.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCACAAG...............................................272.000.00--1.00-1.00----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAATTG...............................................272.000.00---1.001.00----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCCG..................................................262.000.00-1.00-1.00-----------------------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGACGAG.............................................222.000.002.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATTG................................................272.000.00--1.001.00-----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCATTAG...............................................292.000.00----2.00----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAAGGG...............................................272.000.001.00-----1.00--------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTACAG..................................................282.000.00--1.001.00-----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCCCAG................................................282.000.00-1.00--1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCTTG..................................................272.000.00-1.001.00------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTAATG....................................................252.000.00--1.001.00-----------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTTTTTTCCG..................................................292.000.00-1.00--1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTAAAG.................................................282.000.001.00---1.00----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTTACAG.................................................292.000.00-1.00-1.00-----------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTAG.....................................................281.000.00-1.00-------------------------------------
.....................................................................................................................................................................................TTTTTTTTTTTTTTTTCAGACGGGGAC..........................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTATGG..................................................271.000.00---1.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCTAAG................................................291.000.00-1.00-------------------------------------
...........................................................................TTTCTGCATGGCACCTTTT............................................................................................................................................................191.000.00------------------1.00--------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCACTG................................................261.000.00----1.00----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTACTG....................................................261.000.00--1.00------------------------------------
........................................................................................................ACTTTTTCCCACCTTGGCCC..............................................................................................................................201.000.00-----1.00---------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAACCG...............................................281.000.00-1.00-------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTGTTG.....................................................251.000.00---1.00-----------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTTGG....................................................291.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATGG...............................................281.000.00---1.00-----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCGCT.................................................251.000.00------1.00--------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGGGC................................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCGAG..................................................271.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATCTG...............................................281.000.00---1.00-----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTTCCCG.................................................291.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCCC.................................................281.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCATG.................................................251.000.00----1.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCAAT................................................271.000.00---1.00-----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCATTTG...............................................271.000.00-1.00-------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTGCC...................................................261.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAGTTG...............................................271.000.00-----1.00---------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTAG.....................................................251.000.00---1.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCCC...................................................261.000.00---1.00-----------------------------------
..........................................................................................................................................TCCTCCCCTCCTTCCGCC..............................................................................................181.000.00---------------1.00-----------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCTAT..................................................271.000.00--1.00------------------------------------
................................................................................................................................................................................................................TCGCTGTCGCCAGGCTGGTG......................201.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGCCG................................................271.000.00-----1.00---------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCATTCG...............................................291.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATCT................................................271.000.00--1.00------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCATTG................................................291.000.00---1.00-----------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTTTCTGG...................................................291.000.00------1.00--------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTTACCC.................................................291.000.00---1.00-----------------------------------
......GCCCCGCAACCTCACCCGGCA...............................................................................................................................................................................................................................211.000.00-----------------------------------1.00---
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTAACG....................................................241.000.00-1.00-------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTCTTG..................................................261.000.00---1.00-----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTAATG..................................................281.000.00----1.00----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAAAT...............................................281.000.00----1.00----------------------------------
......................................................................................................................................................................................TTTTTTTTTTTTTTTCAGACGGTGTT..........................................261.000.00-----1.00---------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTAATG...................................................301.000.00----1.00----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAACTG...............................................271.000.00----1.00----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTCTTT....................................................261.000.00-1.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGGCT................................................271.000.00-----1.00---------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTGGCA.......................................................261.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCGAG.................................................281.000.001.00--------------------------------------
............................................................................................................TTTCCCACCTTGTTCGCCA...........................................................................................................................191.000.00-------------------1.00-------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTTTTTATT..................................................301.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCCC....................................................251.000.001.00--------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTCCG..........................................................201.000.00--1.00------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTAT.....................................................251.000.00---1.00-----------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTCACC....................................................241.000.00-----1.00---------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCGGC..................................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCTGAG................................................291.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACCCT...............................................281.000.00-1.00-------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCGAT.................................................251.000.00-1.00-------------------------------------
...............................................................................................................................................................................................................................TGGAGTGCAGTGGCACGACCTCGGCCC271.000.00-----1.00---------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTTTTCAGGGGG..............................................271.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATC.................................................261.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAACTC...............................................281.000.00--1.00------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAATAG...............................................271.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTGCTC.....................................................241.000.00-----1.00---------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTGTGG...........................................................211.000.00-----1.00---------------------------------
.................................................................................................................................................................................................TTTTCAGACGGAGTCTCGAGCT...................................221.000.00----------------------------1.00----------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTCCGG..................................................261.000.00---1.00-----------------------------------
.......................................................................................................................................................................................TTTTTTTTTTTTTTCAGACGGTGTT..........................................251.000.00-----1.00---------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAGGC................................................271.000.001.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCAT..................................................261.000.00-1.00-------------------------------------
.........................................................................................................................................................................................TTTTTTTTTTTTCAGACGGAGGCCC........................................251.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAATG...............................................281.000.00-1.00-------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCAC....................................................251.000.00----1.00----------------------------------
.......................................................................................................................................................................................................................CGCCAGGCTGGAGTGCAGTGTGGG...........241.000.00---------------------------------1.00-----
....................................................................................................................................................................................TTTTTTTTTTTTTTTTTCAGACCCAC............................................261.000.00-----1.00---------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTCTAG....................................................241.000.00-1.00-------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTACAG....................................................261.000.00---1.00-----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTTAACG.................................................291.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTATA..................................................271.000.00--1.00------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCAAA..................................................271.000.001.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCTA..................................................261.000.00--1.00------------------------------------
................................................................................................................................................................................................................TCGCTGTCGCCAGGCTGGAGCGC...................231.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAACC...............................................281.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTCATC..................................................271.000.001.00--------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTCCAG....................................................261.000.00-1.00-------------------------------------
....................................................................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGGCAG.............251.000.001.00--------------------------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACGAGCCA.....261.000.001.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCCCTG................................................281.000.00-1.00-------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCCGG.................................................271.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAGAGTAC.............................................301.000.00----1.00----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTCG...........................................................191.000.00-1.00-------------------------------------
.........................................................................................................................................................................................TTTTTTTTTTTTCAGACGGAGCCCC........................................251.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTATTT.................................................281.000.00------1.00--------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGGGT................................................271.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGC..................................................251.000.00-----1.00---------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCGGTC................................................291.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGAGG................................................271.000.001.00--------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTGCC......................................................241.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCATCCG...............................................271.000.00------1.00--------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTTCCTG.................................................291.000.00----1.00----------------------------------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTTTGAG..........................................................241.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTATTT..................................................271.000.00--1.00------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTATG.....................................................231.000.00--1.00------------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTTTGG.....................................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTACCC......................................................231.000.001.00--------------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTGTGG.......................................................251.000.00--1.00------------------------------------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTTTTTTTG........................................................261.000.00-1.00-------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTCCCC...................................................271.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCACTTG...............................................271.000.00--1.00------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTCG......................................................241.000.00-1.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCGGC................................................271.000.001.00--------------------------------------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTTTTTTTTG.......................................................271.000.00---1.00-----------------------------------
.......................................................................................................................................................................ACTTCCTCTCCTTTTTTTTTTTTTTCT........................................................271.000.00--1.00------------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTTTTTACTG.................................................311.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTAATC..................................................271.000.00-----1.00---------------------------------
.........................................................................................................................................CTCCTCCCCTCCTTCCGC...............................................................................................181.000.00--------1.00------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTCAAG...................................................301.000.00-1.00-------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTCGG...................................................251.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAAAG...............................................281.000.00-1.00-------------------------------------
........................................................................................................................................................................................................ACGGAGTCTCGCTGTCGCCAGAC...........................231.000.00-----1.00---------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTATG.......................................................251.000.001.00--------------------------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACGACCTCGT...281.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCACCTT...............................................271.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACCA................................................271.000.00----1.00----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCTC..................................................271.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCCTG................................................271.000.00--1.00------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTAAAT..................................................271.000.00---1.00-----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAACGG...............................................281.000.00------1.00--------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACAAA...............................................281.000.00---1.00-----------------------------------
............CAACCTCACCCTCCTGATA...........................................................................................................................................................................................................................191.000.00----------------------------------1.00----
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCCCCC................................................291.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCGTGG................................................261.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACCT................................................271.000.00-1.00-------------------------------------
................................................................................................................................................................................................................TCGCTGTCGCCAGGCTGGAGTGCAGTGGTGCG..........321.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTACAG....................................................251.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCGGTG................................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTGGGG.....................................................241.000.001.00--------------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTGGTC...................................................301.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTGCG...................................................261.000.001.00--------------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTCCG..........................................................211.000.00---1.00-----------------------------------
........................................................................................................................................................................................TTTTTTTTTTTTTCAGACGGAGCCCC........................................261.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCACG....................................................251.000.00-1.00-------------------------------------
.........................................................................................................................................CTCCTCCCCTCCTTCCGCT..............................................................................................191.000.00------------------------------1.00--------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCAAATT...............................................291.000.00--1.00------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAACG................................................261.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATCT...............................................281.000.001.00--------------------------------------
........................................................................................................................................................................................................ACGGAGTCTCGCTGTCGCCTACG...........................231.000.001.00--------------------------------------
.................................................................................................................................................................................CTTTTTTTTTTTTTTTTTTTCAGCCC...............................................261.000.00-----1.00---------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCCCA................................................271.000.00-1.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAAGG...............................................281.000.00---1.00-----------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTGG.......................................................251.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACAGG...............................................281.000.00----1.00----------------------------------
...............................................................................................................................................................................................................................TGGAGTGCAGTGGCACGACCTCGTC..251.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCAG..................................................2721.001.000.50---0.50----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCGC..................................................241.000.001.00--------------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTTTTTGCA..................................................301.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCACACG...............................................281.000.00--1.00------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATAG...............................................281.000.001.00--------------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTTCCCT.....................................................261.000.00--1.00------------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTAC.....................................................281.000.001.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTCCCG....................................................241.000.00----1.00----------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTCTTG..................................................281.000.00-1.00-------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCTCAG................................................281.000.00-1.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAGAGACA.............................................301.000.00------1.00--------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTCCAG..................................................281.000.00-1.00-------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAACAG...............................................281.000.00---1.00-----------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTCCGC....................................................251.000.001.00--------------------------------------
............................................................................................................................................CTCCCCTCCTTCCTCCTCCG..........................................................................................201.000.00------------------------1.00--------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTATT.......................................................231.000.00------1.00--------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAATCC...............................................281.000.001.00--------------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATCAG...............................................281.000.00---1.00-----------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTTTTTCCT...................................................281.000.00---1.00-----------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCCTTC................................................271.000.001.00--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCAC..................................................271.000.001.00--------------------------------------
..........................................................................................................................................TCCTCCCCTCCTTCCGC...............................................................................................171.000.00-----------------------1.00---------------
..........................................................................................................................................TCCTCCCCTCCTTCCTCCACAT..........................................................................................221.000.00----------------------1.00----------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCAATCT...............................................271.000.00---1.00-----------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCGCG.................................................251.000.00------1.00--------------------------------
......................................................................................................................................................................................................................................CAGTGGCACGACCTCGGCTC2001.001.00-------------------------1.00-------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCAAATC...............................................281.000.00------1.00--------------------------------
...............................................................................................................................................................................TCCTTTTTTTTTTTTTTTTTTTCATTA................................................271.000.00---1.00-----------------------------------
...........................................................................................................................................................................CCTCTCCTTTTTTTTTTTTTTTTTTCCTG..................................................291.000.00-1.00-------------------------------------
............................................................................................................................................................................CTCTCCTTTTTTTTTTTTTTTTTTAAAT..................................................281.000.00---1.00-----------------------------------
.........................................................................................................................................................................TTCCTCTCCTTTTTTTTTTTTTTTTTATG....................................................291.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCATAAG...............................................271.000.00--1.00------------------------------------
........................................................CCCCAGATATCACCCCGC................................................................................................................................................................................181.000.00-----------------------------1.00---------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTACC..................................................271.000.001.00--------------------------------------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTTTTTTTTTTG.....................................................291.000.00---1.00-----------------------------------
..........................................................................................................................................................................TCCTCTCCTTTTTTTTTTTTTTTC........................................................241.000.001.00--------------------------------------
................................................................................................................................................................................CCTTTTTTTTTTTTTTTTTTTCATTG................................................261.000.00--1.00------------------------------------
......................................................................................................................................................................................................AGACGGAGTCTCGCTGTCGCCAGGCTGGAGTG....................3230.670.670.67--------------------------------------
.............................................................................................................................................................................TCTCCTTTTTTTTTTTTTTTTTTTCAGTC................................................2920.501.00---0.50-----------------------------------
.........................................................................................................................................................................................................CGGAGTCTCGCTGTCGCCAGGC...........................2230.330.33------------------------------------0.33--
........................................................................................................................................................................................................ACGGAGTCTCGCTGTCGCCAGGCTGGAGTGC...................3130.330.330.33--------------------------------------
........................................................................................................................................................................................................ACGGAGTCTCGCTGTCGCCAGGCTGGAGTG....................3030.330.33-----0.33---------------------------------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTTTT............................................................2270.140.14--0.14------------------------------------
...................................................................................................................................GATTCTCTCCTCCCCT.......................................................................................................1680.120.12-------------------------------------0.12-
...........................................................................................................................................CCTCCCCTCCTTCCTCCT.............................................................................................1890.110.11--------------------------------------0.11
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTTT..............................................................2090.110.11------0.11--------------------------------

Antisense strand
TCCCCTGCCCCGCAACCTCACCCTCCTGTTCGGAGCCCTGAGCTCTTCACCACTGTCCCCAGATATCACCCACCTTTTCTGCATGGCACCTCTGCAGTGCCTTCACTTTTTCCCACCTTGTTCTGATCATAGATTCTCTCCTCCCCTCCTTCCTCCTTCCGTCACTCACTTCCTCTCCTTTTTTTTTTTTTTTTTTTCAGACGGAGTCTCGCTGTCGCCAGGCTGGAGTGCAGTGGCACGACCTCGGCTC

....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR040040(GSM532925)
G612N. (cervix)		SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)		SRR040009(GSM532894)
G727T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782SRR037937(GSM510475)
293cand2. (cell line)		SRR015358(GSM380323)
NaÌøve B Cell (Naive39). (B cell)		SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)		SRR029128(GSM416757)
H520. (cell line)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577579(Rovira)
total RNA. (breast)		SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR324841(SRX087285)
"Total RNA, no rRNA depletion". (cell line)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		TAX577743(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
...........................................TCTTCACCACTGTCCCAATC........................................................................................................................................................................................... 202.000.00-------2.00-------------------------------
..........................................................................................................................................................................................................GGAGTCTCGCTGTCGCCAATCC.......................... 222.000.002.00--------------------------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACGACCGG..... 262.000.002.00--------------------------------------
................................................................................................................................................................................................................................GGAGTGCAGTGGCACGACCTCGGCTCGTC 291.000.001.00--------------------------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACGACCTCGGC.. 281.000.001.00--------------------------------------
.................................AGCCCTGAGCTCTTCATG....................................................................................................................................................................................................... 181.000.00---------1.00-----------------------------
....................................................................................................................................................................................................................TGTCGCCAGGCTGGAGTGCAGTTG.............. 241.000.00-----------------1.00---------------------
..............................................GGTGATATCTGGGGACAGTGGTGA.................................................................................................................................................................................... 2411.001.00---------------------------1.00-----------
........................................................................................................................................................................CTTCCTCTCCTTTTTTTTAAAA............................................................ 221.000.00----------------1.00----------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACGACGGGC.... 261.000.001.00--------------------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCGGCG................................................ 281.000.00-------------------------------1.00-------
..................................................................................................................ACCTTGTTCTGATCATAGATTCTCTA.............................................................................................................. 261.000.00--------------1.00------------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACGACCGGC.... 261.000.001.00--------------------------------------
.......................................................................................................................................................CCTCCTTCCGTCACTCTCA................................................................................ 191.000.00-------------1.00-------------------------
..............................................................................................................................................................................CTCCTTTTTTTTTTTTTTTTTTTCAGAC................................................ 281.000.00---------------------1.00-----------------
..............................................................................................................................................................................................TTTTTTTCAGACGGAGTCTAGG...................................... 221.000.00------------1.00--------------------------
.............................................................................................................................................TCCCCTCCTTCCTCCTGAC.......................................................................................... 191.000.00-----------1.00---------------------------
............................................................................................................................................................................................................................GGCTGGAGTGCAGTGGCACGACGGAC.... 261.000.00-----1.00---------------------------------
...........................................................................................................................................................................................................................AGGCTGGAGTGCAGTGGCACGACCTCGGC.. 291.000.00-----1.00---------------------------------
..........................................................................................................................................TCCTCCCCTCCTTCCTCGTC............................................................................................ 201.000.00--------------------------------1.00------
.............................................................................................................................................TCCCCTCCTTCCTCCTT............................................................................................ 171.000.00--------------------1.00------------------