ID: uc010qjw.1_intron_6_0_chr10_74237362_r.3p
GENE: (2)
chr10:74237312-74237561-


(1)
B-CELL
(2)
BREAST
(3)
CELL-LINE
(2)
CERVIX
(2)
LIVER
(7)
OTHER
(7)
SKIN

Sense strand
AAACTAATAAAAGAAACCAACTTGAAATTATCCATGTTGGCAGGGTGACATGCCCAGAACTCCTGACTGCACTTACAACAAAGAGACTAGAAAGAACAAAGTAGAAAGCTGGCTTGTTGTGAGGGTAAGACTAAGATGTAGTGTTTCAACTTCTTACTTTGCAGCAATATGTCTCACCCTAGACATACTTTCTTGCCCAGATAAGTAATACCATATTGAAGCAACAGAACGTTAATATTACTAAGCTAAG
..............................................................................................(((((..(((....)))..)))))...(((((((((...((.((........)).)))))))))))..........................................................................................
.........................................................................................90....................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR189784SRR343334SRR343337SRR343336SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189785SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
........................................................................................................................................TGTAGTGTTTCAACTTTATG..............................................................................................2052.000.0017.0017.0012.003.002.00-1.00-----------------
.........................................................................................................................................GTAGTGTTTCAACTTTATG..............................................................................................1948.000.0021.007.0014.002.003.00---1.00---------------
..............................................................................................AACAAAGTAGAAAGCACTA.........................................................................................................................................193.000.00-----------1.00-1.00-----1.00----
.......................................................................CTTACAACAAAGAGACTAGAAAGAA..........................................................................................................................................................2512.002.00-----2.00------------------
........................................................................................................................................TGTAGTGTTTCAACTTTAAG..............................................................................................202.000.001.00-------1.00---------------
...........................................................................CAACAAAGAGACTAGAAAGAACAAA......................................................................................................................................................2511.001.00------------------1.00-----
................................................CATGCCCAGAACTCCTGACTGC....................................................................................................................................................................................2211.001.00---------1.00--------------
..........................................................................ACAACAAAGAGACTAGAAAGAA..........................................................................................................................................................2211.001.00-----1.00------------------
....................................................................................................................................................ACTTCTTACTTTGCACATG...................................................................................191.000.00-1.00----------------------
...........................................................CTCCTGACTGCACTTACAACAAAGAGACT..................................................................................................................................................................2911.001.00-----1.00------------------
.............................................................................ACAAAGAGACTAGAAAGAA..........................................................................................................................................................1911.001.00-------1.00----------------
........................................................................................................................................TGTAGTGTTTCAACTTGATG..............................................................................................201.000.00-1.00----------------------
.........................................................................................................................................GTAGTGTTTCAACTTTGTG..............................................................................................191.000.00-1.00----------------------
.........................................................................................................................................GTAGTGTTTCAACTTTAAA..............................................................................................191.000.00-1.00----------------------
.AACTAATAAAAGAAAAGAT......................................................................................................................................................................................................................................191.000.00----------------1.00-------
.................................................................ACTGCACTTACAACAAAGACTT...................................................................................................................................................................221.000.00------------1.00-----------
.........................................................................TACAACAAAGAGACTAGAAAGA...........................................................................................................................................................2211.001.00-------1.00----------------
............................................................................................AGAACAAAGTAGAAAGTCA...........................................................................................................................................191.000.00-----------------1.00------
........................................................GAACTCCTGACTGCACTTACAACAAAGAG.....................................................................................................................................................................2911.001.00-------1.00----------------
................................................CATGCCCAGAACTCCTG.........................................................................................................................................................................................1720.500.50--------------------0.50---
.....................................................................................................................................................CTTCTTACTTTGCAGC.....................................................................................1630.330.33---------0.33--------------
.......................................................AGAACTCCTGACTGCA...................................................................................................................................................................................1650.200.20----------------------0.20-

Antisense strand
AAACTAATAAAAGAAACCAACTTGAAATTATCCATGTTGGCAGGGTGACATGCCCAGAACTCCTGACTGCACTTACAACAAAGAGACTAGAAAGAACAAAGTAGAAAGCTGGCTTGTTGTGAGGGTAAGACTAAGATGTAGTGTTTCAACTTCTTACTTTGCAGCAATATGTCTCACCCTAGACATACTTTCTTGCCCAGATAAGTAATACCATATTGAAGCAACAGAACGTTAATATTACTAAGCTAAG
..............................................................................................(((((..(((....)))..)))))...(((((((((...((.((........)).)))))))))))..........................................................................................
.........................................................................................90....................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR343335SRR189784SRR343334SRR343337SRR343336SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR189785SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189782SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR191568(GSM715678)
51genomic small RNA (size selected RNA from t. (breast)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR040035(GSM532920)
G001T. (cervix)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
...................................................................................................................................TAAGATGTAGTGTTTCATTG................................................................................................... 202.000.00------2.00-----------------
.................................................................................................................TTGTTGTGAGGGTAAGAAAG..................................................................................................................... 202.000.00-1.00-1.00--------------------
............................................................................AACAAAGAGACTAGAAAGAACGGC...................................................................................................................................................... 241.000.00--------------1.00---------
..................................................TGCCCAGAACTCCTGCG....................................................................................................................................................................................... 171.000.00----------1.00-------------
.....AATAAAAGAAACCAACTTTGTT............................................................................................................................................................................................................................... 221.000.00---------------1.00--------
.................................................................................................................TTGTTGTGAGGGTAAGAAG...................................................................................................................... 191.000.00-1.00----------------------
.................................................................................................................................................................................................................................AGAACGTTAATATTATTAA...... 191.000.00-1.00----------------------
.................................................CAGGAGTTCTGGGCAT......................................................................................................................................................................................... 1630.330.33----------0.33-------------
...................................................CAGTCAGGAGTTCTGGGC..................................................................................................................................................................................... 1840.250.25---------------------0.25--
...................................................GTCAGGAGTTCTGGGC....................................................................................................................................................................................... 1670.140.14-----------------------0.14