ID: uc010qio.1_intron_1_0_chr10_64575730_r.5p
GENE: (1)
chr10:64578101-64578350-


(2)
B-CELL
(15)
CELL-LINE
(1)
CERVIX
(1)
HEART
(2)
OTHER
(19)
SKIN

Sense strand
GGGGGCCGCGGGACCCGCCAGAGCGCAGGCGGAGTGGGCTGGCGCACGTGGTAAGAACGCAGCTATCTTTTCTTGCTTTTCTTTTCTTTCTTTCTTTCTTGAGAAATAGGACTTTGCACATTTTTGCTGGGGTGGGGTATCTACTAGGGTGCTAACCTTGCTGCGATTTCTTTCCATGTCCTTTTCATCCCCAATTGGAAAAAAGCGCACAGCGCGAGCGAGAAACTTTCCCAAATGTGCTCTGGGTGAC
..................................................(((((((............)))))))..........((((((........))))))................................................................................................................................................
..................................................51.....................................................106..............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
....................................................AAGAACGCAGCTATCTGC....................................................................................................................................................................................189.000.00------1.002.00-1.00----------1.00---------1.001.00--1.00--1.00--
.....................................................AGAACGCAGCTATCTGCGA..................................................................................................................................................................................194.000.00---2.00-------------------------1.00--1.00-------
....................................................AAGAACGCAGCTATCTG.....................................................................................................................................................................................174.000.00------1.00---------------------1.00----1.00-1.00----
.....................................................AGAACGCAGCTATCTGCTA..................................................................................................................................................................................193.000.00---1.00----2.00-------------------------------
........................................................................TTGCTTTTCTTTTCTTTCTTTTCAG.........................................................................................................................................................252.000.00-2.00--------------------------------------
.....................................................AGAACGCAGCTATCTGC....................................................................................................................................................................................172.000.00------------1.00----1.00----------------------
.....................................................AGAACGCAGCTATCTGCG...................................................................................................................................................................................182.000.00----------------------1.00----1.00------------
..................................................GTAAGAACGCAGCTAGCTG.....................................................................................................................................................................................192.000.00---------------------1.00-1.00----------------
....................................................AAGAACGCAGCTATCATC....................................................................................................................................................................................1821.000.50--------------------------1.00-------------
................................................................................CTTTTCTTTCTTTCTTTCTTAAAG..................................................................................................................................................241.000.00--1.00-------------------------------------
..............................................................................TTCTTTTCTTTCTTTCTTAGC.......................................................................................................................................................211.000.001.00---------------------------------------
............................................................................TTTTCTTTTCTTTCTTTCTATG........................................................................................................................................................221.000.00----------1.00-----------------------------
...............................................................................TCTTTTCTTTCTTTCTTTAAAG.....................................................................................................................................................221.000.00----1.00-----------------------------------
..................................................GTAAGAACGCAGCTAGC.......................................................................................................................................................................................171.000.00-----1.00----------------------------------
.....................................................AGAACGCAGCTATCTTC....................................................................................................................................................................................171.000.00-------------------------1.00--------------
............................................................................TTTTCTTTTCTTTCTTTCTTTCAATG....................................................................................................................................................261.000.00--1.00-------------------------------------
....................................................................TTTCTTGCTTTTCTTTTAGT..................................................................................................................................................................201.000.001.00---------------------------------------
............................................................................TTTTCTTTTCTTTCTTTCTTTACTG.....................................................................................................................................................251.000.00----1.00-----------------------------------
...........................................................................CTTTTCTTTTCTTTCTTTCTTTAACG.....................................................................................................................................................261.000.00---------------1.00------------------------
..............................................................................................................................CTGGGGTGGGGTATCTA...........................................................................................................1711.001.00------------------------------------1.00---
...........................................................................CTTTTCTTTTCTTTCTTTCTTTCTTCTCG..................................................................................................................................................291.000.00----1.00-----------------------------------
........................................................................TTGCTTTTCTTTTCTTTCTTTTAG..........................................................................................................................................................241.000.001.00---------------------------------------
.....................................................AGAACGCAGCTATCTTAA...................................................................................................................................................................................181.000.00------------------------1.00---------------
.........................................................................TGCTTTTCTTTTCTTTCTTTCTTGGG.......................................................................................................................................................261.000.001.00---------------------------------------
............................................................................TTTTCTTTTCTTTCTTTCTTACAG......................................................................................................................................................241.000.00--1.00-------------------------------------
....................................................AAGAACGCAGCTATCTGCGA..................................................................................................................................................................................201.000.00---1.00------------------------------------
........................................................................TTGCTTTTCTTTTCTTTCTTTTG...........................................................................................................................................................231.000.001.00---------------------------------------
..................................................GTAAGAACGCAGCTAG........................................................................................................................................................................................161.000.00--------------1.00-------------------------
...........................................................................................................................................................CCTTGCTGCGATTTCGT..............................................................................171.000.00-----1.00----------------------------------
......................................................................TCTTGCTTTTCTTTTCTTTTGTG.............................................................................................................................................................231.000.001.00---------------------------------------
....................................................AAGAACGCAGCTATCGTGC...................................................................................................................................................................................1921.000.50---------1.00------------------------------
........................................................................................................................................................................................................AAAAGCGCACAGCGCTA.................................171.000.00------------------1.00---------------------
........................GCAGGCGGAGTGGGCTGG................................................................................................................................................................................................................1821.001.00--------------------------------------0.500.50
..............................................................................TTCTTTTCTTTCTTTCTTTCTTAGC...................................................................................................................................................251.000.00-1.00--------------------------------------
..............................................................................TTCTTTTCTTTCTTTCTAAAG.......................................................................................................................................................211.000.00----1.00-----------------------------------
.........................................................................TGCTTTTCTTTTCTTTCTTTTTAG.........................................................................................................................................................241.000.00-1.00--------------------------------------
........................................................................TTGCTTTTCTTTTCTTTCTTTTTAG.........................................................................................................................................................251.000.001.00---------------------------------------
...........................................................................CTTTTCTTTTCTTTCTTTCTTTCTAAAT...................................................................................................................................................281.000.00--1.00-------------------------------------
.....................................................................................CTTTCTTTCTTTCTTGAACAG................................................................................................................................................211.000.00-------------1.00--------------------------
.............................................................................TTTCTTTTCTTTCTTTCTTTCTTGG....................................................................................................................................................251.000.00-1.00--------------------------------------
...........................................................................CTTTTCTTTTCTTTCTTTCTAGT........................................................................................................................................................231.000.00----------1.00-----------------------------
............................................................................TTTTCTTTTCTTTCTTTCTTTCTGCC....................................................................................................................................................261.000.001.00---------------------------------------
....................................................AAGAACGCAGCTATCGAC....................................................................................................................................................................................1821.000.50-----------1.00----------------------------
....................................................AAGAACGCAGCTATC.......................................................................................................................................................................................1520.500.50-----------0.50----------------------------
.............................................................................TTTCTTTTCTTTCTTTCTTTCTTGAG...................................................................................................................................................2630.330.330.33---------------------------------------
....................................................................TTTCTTGCTTTTCTTTTCTTTC................................................................................................................................................................2240.250.25-0.25--------------------------------------
............................................................................TTTTCTTTTCTTTCTTTCTTTCTTG.....................................................................................................................................................2580.250.25--0.25-------------------------------------

Antisense strand
GGGGGCCGCGGGACCCGCCAGAGCGCAGGCGGAGTGGGCTGGCGCACGTGGTAAGAACGCAGCTATCTTTTCTTGCTTTTCTTTTCTTTCTTTCTTTCTTGAGAAATAGGACTTTGCACATTTTTGCTGGGGTGGGGTATCTACTAGGGTGCTAACCTTGCTGCGATTTCTTTCCATGTCCTTTTCATCCCCAATTGGAAAAAAGCGCACAGCGCGAGCGAGAAACTTTCCCAAATGTGCTCTGGGTGAC
..................................................(((((((............)))))))..........((((((........))))))................................................................................................................................................
..................................................51.....................................................106..............................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189784SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
GSM532876(GSM532876)
G547T. (cervix)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR189787DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM416733(GSM416733)
HEK293. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR037937(GSM510475)
293cand2. (cell line)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR037931(GSM510469)
293GFP. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR037938(GSM510476)
293Red. (cell line)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
....................................................................................................................................................................AGGACATGGAAAGAAATC.................................................................... 1811.001.00-------------------1.00--------------------