| (9) B-CELL | (1) BRAIN | (3) BREAST | (7) CELL-LINE | (1) HEART | (1) HELA | (1) LIVER | (2) OTHER | (4) SKIN | (1) UTERUS | (1) XRN.ip |
| TATCTGCTTACATTCAGCTCTTCAGAAACCTTGCTAAGGCTATTGCTACGGTAATCAAATATTGTTTGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTATGTCTGTATGTGTCTGTGTCTGGGTAAGAGGGAAGTGAAAGAGAACCTTAGCTTCGAGTGTTCAGTTTGACAACCTTTATATTTTACAAAATTTATAGTTTTGTGGTATCTCTAACAAAATAAATAAAATTTCTTTCCCAATTTTGGATC .....................................................................(((((((.(((((((..((....))..))))))).))))))).......(((.....)))..(((((..(((.....))).)))))............................................................................................... ....................................................................69.....................................................................................156............................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189783 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | TAX577588(Rovira) total RNA. (breast) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | TAX577742(Rovira) total RNA. (breast) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR343337 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029124(GSM416753) HeLa. (hela) | GSM450607(GSM450607) miRNA sequencing raw reads from post-mortem s. (brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................................AGTGAAAGAGAACCTGAAA.................................................................................................. | 19 | 39.00 | 0.00 | 6.00 | 1.00 | 4.00 | 4.00 | 4.00 | 3.00 | 3.00 | 1.00 | 2.00 | 2.00 | 2.00 | 1.00 | - | - | - | - | - | 1.00 | - | - | 1.00 | 1.00 | 1.00 | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | |
| ............................................................................TGCGTGCGTGTGTGTGTGTGTGTAGGAA.................................................................................................................................................. | 28 | 2.00 | 0.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................................................AAGAGGGAAGTGAAAAGCA.......................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | - | - | - | |
| .........................................................................GCGTGCGTGCGTGTGGTG............................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ............................................................................TGCGTGCGTGTGTGTGTGTGTCAC...................................................................................................................................................... | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..........................................................................CGTGCGTGCGTGTGTGTGTGGTG......................................................................................................................................................... | 23 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................AAGTGAAAGAGAACCCAGG................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..............................................................................................TGTGTATGTCTGTATGTCTCT....................................................................................................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................AGTGAAAGAGAACCTGAA................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| ........................................................................TGCGTGCGTGCGTGTGGTG............................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................TGTGCGTGCGTGCGTGCGTGTGTGTGTGC........................................................................................................................................................... | 29 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................TGTCTGTATGTGTCTGTGCTA................................................................................................................................. | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................AGTGAAAGAGAACCTGACA.................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .........................................................................................................................................................................ACAACCTTTATATTTCAA............................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................TGTGTCTGGGTAAGAGGG...................................................................................................................... | 18 | 2 | 0.50 | 0.50 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.50 | - | - |
| ..........................AACCTTGCTAAGGCTATTGCTACG........................................................................................................................................................................................................ | 24 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - |
| ................GCTCTTCAGAAACCTTGCTAAGGCTATT.............................................................................................................................................................................................................. | 28 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| TATCTGCTTACATTCAGCTCTTCAGAAACCTTGCTAAGGCTATTGCTACGGTAATCAAATATTGTTTGTGCGTGCGTGCGTGCGTGTGTGTGTGTGTGTATGTCTGTATGTGTCTGTGTCTGGGTAAGAGGGAAGTGAAAGAGAACCTTAGCTTCGAGTGTTCAGTTTGACAACCTTTATATTTTACAAAATTTATAGTTTTGTGGTATCTCTAACAAAATAAATAAAATTTCTTTCCCAATTTTGGATC .....................................................................(((((((.(((((((..((....))..))))))).))))))).......(((.....)))..(((((..(((.....))).)))))............................................................................................... ....................................................................69.....................................................................................156............................................................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR189783 | SRR189780(GSM714640) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR033719(GSM497064) 6hr Activated B cell line (ABC158). (B cell) | SRR033727(GSM497072) HIV-positive DL (HIV412). (B cell) | SRR033720(GSM497065) EBV activated B cell line (EBV159). (B cell) | SRR015358(GSM380323) NaÌøve B Cell (Naive39). (B cell) | SRR189785 | SRR189779(GSM714639) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR189784 | SRR033724(GSM497069) L428 cell line (L428). (B cell) | SRR033730(GSM497075) Lymphoblastic (ALL411). (B cell) | SRR094129(GSM651905) small RNA(18-35nt)small RNA deep sequencing o. (uterus) | TAX577588(Rovira) total RNA. (breast) | SRR330888(SRX091726) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR330906(SRX091744) tissue: normal skindisease state: normal. (skin) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR553573(SRX182779) source: Cerebellum. (Cerebellum) | SRR189782 | SRR037937(GSM510475) 293cand2. (cell line) | SRR330904(SRX091742) tissue: normal skindisease state: normal. (skin) | SRR015364(GSM380329) Plasma B cells (PC44). (B cell) | SRR039192(GSM494811) K562 cell line is derived from a CML patient . (cell line) | SRR033721(GSM497066) Ly3 cell line (Ly3). (B cell) | TAX577742(Rovira) total RNA. (breast) | SRR015448(SRR015448) cytoplasmic small RNAs. (breast) | SRR039613(GSM531976) Human Normal Liver Tissue Sample 3. (liver) | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR033728(GSM497073) MALT (MALT413). (B cell) | SRR342896(SRX096792) small RNA seq of Right atrial tissue. (heart) | SRR330895(SRX091733) tissue: skin psoriatic uninvolveddisease stat. (skin) | SRR343337 | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR207115(GSM721077) XRN1&2 knockdown. (XRN1/XRN2 cell line) | SRR029124(GSM416753) HeLa. (hela) | GSM450607(GSM450607) miRNA sequencing raw reads from post-mortem s. (brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................TGTGTGTGTGTGTATGTCTTTTT............................................................................................................................................. | 23 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................................................................................................TTCTTTCCCAATTTTCC... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .................................................................................GCGTGTGTGTGTGTGTGTATGTTGG................................................................................................................................................ | 25 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................CTTAGCTTCGAGTGTTT....................................................................................... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | |
| ..................................................GTAATCAAATATTGTTTGC..................................................................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |